Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08715

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,957,197	+				-0.4
1,957,197	+				-1.6
1,957,213	+				-1.6
1,957,213	+				-1.1
1,957,297	+				-0.3
1,957,351	+				-0.3
1,957,352	-				-1.8
1,957,352	-				+0.5
1,957,352	-				+0.9
1,957,352	-				+1.7
1,957,454	+		LRK53_RS08710	0.18	+2.0
1,957,454	+		LRK53_RS08710	0.18	-1.4
1,957,455	-		LRK53_RS08710	0.18	+0.8
1,957,757	+		LRK53_RS08710	0.53	-2.0
1,957,758	-		LRK53_RS08710	0.53	-0.2
1,957,857	-		LRK53_RS08710	0.65	-1.8
1,957,942	-		LRK53_RS08710	0.75	+0.4
1,957,948	+		LRK53_RS08710	0.75	+2.0
1,957,948	+		LRK53_RS08710	0.75	+1.6
1,957,949	-		LRK53_RS08710	0.76	-0.4
1,957,949	-		LRK53_RS08710	0.76	-1.0
1,957,978	+		LRK53_RS08710	0.79	-0.9
1,958,048	+		LRK53_RS08710	0.87	-1.2
1,958,048	+		LRK53_RS08710	0.87	-0.2
1,958,049	-		LRK53_RS08710	0.87	-1.3
1,958,049	-		LRK53_RS08710	0.87	+0.2
1,958,049	-		LRK53_RS08710	0.87	-0.8
1,958,049	-		LRK53_RS08710	0.87	+1.7
1,958,049	-		LRK53_RS08710	0.87	-2.8
1,958,049	-		LRK53_RS08710	0.87	-0.4
1,958,049	-		LRK53_RS08710	0.87	-2.9
1,958,050	+		LRK53_RS08710	0.87	-1.4
1,958,050	+		LRK53_RS08710	0.87	-1.9
1,958,050	+		LRK53_RS08710	0.87	+0.0
1,958,050	+		LRK53_RS08710	0.87	-2.2
1,958,050	+		LRK53_RS08710	0.87	-0.5
1,958,050	+		LRK53_RS08710	0.87	+1.0
1,958,050	+		LRK53_RS08710	0.87	+0.4
1,958,050	+		LRK53_RS08710	0.87	-0.5
1,958,050	+		LRK53_RS08710	0.87	-0.8
1,958,050	+		LRK53_RS08710	0.87	+1.4
1,958,050	+		LRK53_RS08710	0.87	-1.6
1,958,050	+		LRK53_RS08710	0.87	-0.7
1,958,050	+		LRK53_RS08710	0.87	+1.4
1,958,050	+		LRK53_RS08710	0.87	-0.9
1,958,050	+		LRK53_RS08710	0.87	-2.3
1,958,050	+		LRK53_RS08710	0.87	-0.8
1,958,050	+		LRK53_RS08710	0.87	-1.0
1,958,050	+		LRK53_RS08710	0.87	-1.3
1,958,051	-		LRK53_RS08710	0.87	-0.5
1,958,051	-		LRK53_RS08710	0.87	-0.6
1,958,051	-		LRK53_RS08710	0.87	-1.5
1,958,051	-		LRK53_RS08710	0.87	-0.5
1,958,051	-		LRK53_RS08710	0.87	-1.2
1,958,051	-		LRK53_RS08710	0.87	-0.3
1,958,051	-		LRK53_RS08710	0.87	-1.2
1,958,051	-		LRK53_RS08710	0.87	+0.0
1,958,051	-		LRK53_RS08710	0.87	-3.2
1,958,051	-		LRK53_RS08710	0.87	-2.1
1,958,051	-		LRK53_RS08710	0.87	-2.3
1,958,051	-		LRK53_RS08710	0.87	-0.8
1,958,051	-		LRK53_RS08710	0.87	+0.1
1,958,051	-		LRK53_RS08710	0.87	-2.1
1,958,051	-		LRK53_RS08710	0.87	-0.3
1,958,051	-		LRK53_RS08710	0.87	-0.7
1,958,051	-		LRK53_RS08710	0.87	-0.3
1,958,104	+				-0.3
1,958,104	+				+0.1
1,958,104	+				-0.6
1,958,105	-				+0.0
1,958,105	-				+0.0
1,958,159	+				+0.2
1,958,160	-				+2.1
1,958,160	-				-0.5
1,958,186	-				+0.2
1,958,187	+				-0.3
1,958,187	+				+0.0
1,958,187	+				+0.9
1,958,187	+				-1.9
1,958,187	+				-0.2
1,958,187	+				-0.9
1,958,187	+				-1.0
1,958,188	-				-0.3
1,958,188	-				-1.4
1,958,188	-				+0.1
1,958,188	-				-1.5
1,958,188	-				-0.2
1,958,188	-				-0.4
1,958,190	-				-3.3
1,958,190	-				-1.9
1,958,190	-				-2.3
1,958,304	+				-1.1
1,958,305	-				+0.1
1,958,357	+		LRK53_RS08715	0.12	-0.9
1,958,357	+		LRK53_RS08715	0.12	+0.7
1,958,357	+		LRK53_RS08715	0.12	-2.0
1,958,358	-		LRK53_RS08715	0.12	-1.2
1,958,358	-		LRK53_RS08715	0.12	-0.8
1,958,358	-		LRK53_RS08715	0.12	+2.5
1,958,358	-		LRK53_RS08715	0.12	+1.0
1,958,406	+		LRK53_RS08715	0.15	+2.1
1,958,406	+		LRK53_RS08715	0.15	+0.0
1,958,407	-		LRK53_RS08715	0.15	-0.9
1,958,407	-		LRK53_RS08715	0.15	-1.6
1,958,407	-		LRK53_RS08715	0.15	-0.5
1,958,417	+		LRK53_RS08715	0.16	-0.5
1,958,417	+		LRK53_RS08715	0.16	-0.5
1,958,417	+		LRK53_RS08715	0.16	-1.1
1,958,418	-		LRK53_RS08715	0.16	+1.4
1,958,418	-		LRK53_RS08715	0.16	-0.9
1,958,418	-		LRK53_RS08715	0.16	-1.4
1,958,521	+		LRK53_RS08715	0.22	+0.5
1,958,522	-		LRK53_RS08715	0.22	+2.0
1,958,614	-		LRK53_RS08715	0.28	-0.9
1,958,662	+		LRK53_RS08715	0.31	-0.3
1,958,663	-		LRK53_RS08715	0.31	-1.7
1,958,663	-		LRK53_RS08715	0.31	-0.6
1,958,673	-		LRK53_RS08715	0.31	+0.4
1,958,673	-		LRK53_RS08715	0.31	-1.3
1,958,786	+		LRK53_RS08715	0.38	-2.5
1,958,786	+		LRK53_RS08715	0.38	+1.5
1,958,787	-		LRK53_RS08715	0.38	-1.5
1,958,787	-		LRK53_RS08715	0.38	+0.0
1,958,807	+		LRK53_RS08715	0.39	+0.1
1,958,808	-		LRK53_RS08715	0.39	-1.1
1,958,810	+		LRK53_RS08715	0.39	+0.1
1,958,810	+		LRK53_RS08715	0.39	-0.9
1,958,810	+		LRK53_RS08715	0.39	-2.6
1,958,810	+		LRK53_RS08715	0.39	+1.1
1,958,810	+		LRK53_RS08715	0.39	-2.6
1,958,810	+		LRK53_RS08715	0.39	-0.3
1,958,810	+		LRK53_RS08715	0.39	-1.1
1,958,810	+		LRK53_RS08715	0.39	-2.3
1,958,810	+		LRK53_RS08715	0.39	+0.0
1,958,810	+		LRK53_RS08715	0.39	-2.7
1,958,810	+		LRK53_RS08715	0.39	-2.6
1,958,810	+		LRK53_RS08715	0.39	-0.2
1,958,811	-		LRK53_RS08715	0.39	+1.2
1,958,811	-		LRK53_RS08715	0.39	-1.8
1,958,811	-		LRK53_RS08715	0.39	-0.4
1,958,811	-		LRK53_RS08715	0.39	+0.0
1,958,811	-		LRK53_RS08715	0.39	-1.6
1,958,811	-		LRK53_RS08715	0.39	-0.9
1,958,811	-		LRK53_RS08715	0.39	-0.5
1,958,811	-		LRK53_RS08715	0.39	-2.7
1,958,845	+		LRK53_RS08715	0.41	+0.0
1,958,845	+		LRK53_RS08715	0.41	-1.3
1,958,845	+		LRK53_RS08715	0.41	+0.2
1,958,846	-		LRK53_RS08715	0.42	-0.8
1,958,846	-		LRK53_RS08715	0.42	+0.9
1,958,846	-		LRK53_RS08715	0.42	-0.8
1,958,906	+		LRK53_RS08715	0.45	+0.2
1,958,907	-		LRK53_RS08715	0.45	-0.3
1,958,907	-		LRK53_RS08715	0.45	-2.2
1,958,907	-		LRK53_RS08715	0.45	-0.5
1,958,907	-		LRK53_RS08715	0.45	+0.6
1,959,004	+		LRK53_RS08715	0.51	-2.0
1,959,005	-		LRK53_RS08715	0.51	+1.1
1,959,050	+		LRK53_RS08715	0.54	+1.0
1,959,050	+		LRK53_RS08715	0.54	-0.0
1,959,137	+		LRK53_RS08715	0.59	+1.7
1,959,137	+		LRK53_RS08715	0.59	+1.4
1,959,163	+		LRK53_RS08715	0.61	-1.7
1,959,163	+		LRK53_RS08715	0.61	-0.9
1,959,163	+		LRK53_RS08715	0.61	+1.1
1,959,164	-		LRK53_RS08715	0.61	-0.8
1,959,183	-		LRK53_RS08715	0.62	-0.6
1,959,183	-		LRK53_RS08715	0.62	-2.3
1,959,183	-		LRK53_RS08715	0.62	-0.5
1,959,299	-		LRK53_RS08715	0.69	+0.7
1,959,299	-		LRK53_RS08715	0.69	-1.4
1,959,515	+		LRK53_RS08715	0.82	-0.7
1,959,535	+		LRK53_RS08715	0.83	-1.3
1,959,535	+		LRK53_RS08715	0.83	-0.9
1,959,535	+		LRK53_RS08715	0.83	-0.3
1,959,535	+		LRK53_RS08715	0.83	+0.2
1,959,536	-		LRK53_RS08715	0.83	-0.3
1,959,536	-		LRK53_RS08715	0.83	-0.3
1,959,536	-		LRK53_RS08715	0.83	-1.0
1,959,536	-		LRK53_RS08715	0.83	-0.5
1,959,536	-		LRK53_RS08715	0.83	-1.4
1,959,692	+				-0.6
1,959,864	+				-0.5
1,959,864	+				+0.2
1,959,898	+				-2.2
1,959,898	+				+0.3
1,959,898	+				-0.2
1,959,898	+				-2.2
1,959,898	+				-0.3
1,959,898	+				-0.3
1,959,898	+				-1.3
1,959,899	-				-1.4
1,959,902	+				-0.7
1,959,902	+				-1.6
1,959,902	+				-0.3
1,959,902	+				-1.3
1,959,902	+				+2.7
1,959,902	+				+0.0
1,959,902	+				+0.7
1,959,902	+				-0.2
1,959,902	+				-1.3
1,959,903	-				+0.1
1,959,903	-				-2.0
1,959,903	-				-0.1
1,959,903	-				-2.1
1,959,903	-				-0.9
1,959,975	+				+2.8
1,959,975	+				+1.2
1,959,976	-				-0.8
1,959,976	-				-1.1
1,959,976	-				-2.0
1,959,976	-				-1.2
1,959,989	-				-0.4
1,959,989	-				-2.1
1,960,009	-				-2.0
1,960,112	+		LRK53_RS08720	0.14	-1.1
1,960,112	+		LRK53_RS08720	0.14	+0.5
1,960,112	+		LRK53_RS08720	0.14	-1.2
1,960,113	-		LRK53_RS08720	0.14	-0.3
1,960,113	-		LRK53_RS08720	0.14	-2.5
1,960,146	+		LRK53_RS08720	0.16	+0.2
1,960,146	+		LRK53_RS08720	0.16	+1.5
1,960,146	+		LRK53_RS08720	0.16	-1.1
1,960,146	+		LRK53_RS08720	0.16	+0.1
1,960,147	-		LRK53_RS08720	0.16	+2.8
1,960,147	-		LRK53_RS08720	0.16	-0.6
1,960,147	-		LRK53_RS08720	0.16	+0.2
1,960,147	-		LRK53_RS08720	0.16	-1.3
1,960,153	-		LRK53_RS08720	0.16	-0.3
1,960,153	-		LRK53_RS08720	0.16	-2.5
1,960,153	-		LRK53_RS08720	0.16	-2.7
1,960,153	-		LRK53_RS08720	0.16	-0.5
1,960,153	-		LRK53_RS08720	0.16	-0.4
1,960,740	+		LRK53_RS08720	0.44	-0.4