Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04415

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,025,396	-		LRK53_RS04405	0.69	+0.1
1,025,413	+		LRK53_RS04405	0.71	-0.8
1,025,414	-		LRK53_RS04405	0.71	-0.1
1,025,463	+		LRK53_RS04405	0.75	-1.4
1,025,463	+		LRK53_RS04405	0.75	+1.0
1,025,463	+		LRK53_RS04405	0.75	+2.1
1,025,464	-		LRK53_RS04405	0.75	-2.1
1,025,464	-		LRK53_RS04405	0.75	-2.1
1,025,464	-		LRK53_RS04405	0.75	-0.0
1,025,498	-		LRK53_RS04405	0.78	+0.9
1,025,514	-		LRK53_RS04405	0.79	-2.5
1,025,581	+		LRK53_RS04405	0.85	-0.1
1,025,582	-		LRK53_RS04405	0.85	-1.1
1,025,606	+		LRK53_RS04405	0.87	-3.0
1,025,606	+		LRK53_RS04405	0.87	-0.8
1,025,606	+		LRK53_RS04405	0.87	-0.1
1,025,607	-		LRK53_RS04405	0.87	-0.5
1,025,607	-		LRK53_RS04405	0.87	+0.1
1,025,607	-		LRK53_RS04405	0.87	+0.4
1,025,607	-		LRK53_RS04405	0.87	+0.4
1,025,607	-		LRK53_RS04405	0.87	-0.5
1,025,607	-		LRK53_RS04405	0.87	+0.7
1,025,715	-				-0.3
1,025,715	-				-3.4
1,025,756	+				-0.8
1,025,756	+				-0.8
1,025,756	+				-0.9
1,025,756	+				-0.1
1,025,756	+				-1.3
1,026,135	+				-0.7
1,026,136	-				-0.1
1,026,136	-				-1.6
1,026,172	+				-0.5
1,026,172	+				+0.8
1,026,172	+				+0.3
1,026,173	-				-1.6
1,026,173	-				+1.0
1,026,173	-				-0.9
1,026,173	-				+0.3
1,026,205	+				-1.7
1,026,205	+				-1.1
1,026,206	-				-1.6
1,026,252	-				-3.4
1,026,252	-				-1.5
1,026,252	-				-0.4
1,026,258	+				-0.7
1,026,267	+				-1.1
1,026,267	+				+1.9
1,026,267	+				-1.0
1,026,268	-				+2.9
1,026,268	-				-0.7
1,026,268	-				-0.1
1,026,268	-				-1.5
1,026,270	+				-0.6
1,026,270	+				-0.8
1,026,273	-				-1.4
1,026,273	-				-0.4
1,026,273	-				-0.8
1,026,278	+				-0.9
1,026,278	+				-1.4
1,026,278	+				-0.8
1,026,278	+				+1.3
1,026,279	-				-0.7
1,026,284	+				-0.9
1,026,284	+				-1.2
1,026,284	+				-0.8
1,026,285	-				-0.5
1,026,285	-				-0.7
1,026,285	-				-0.6
1,026,285	-				+0.2
1,026,285	-				+0.4
1,026,348	+				-1.7
1,026,348	+				-2.1
1,026,349	-				+0.9
1,026,349	-				-0.5
1,026,349	-				-1.1
1,026,349	-				-3.6
1,026,349	-				-0.1
1,026,349	-				-2.7
1,026,349	-				-3.1
1,026,349	-				-1.2
1,026,356	-				-0.6
1,026,356	-				+0.6
1,026,356	-				-0.3
1,026,396	-				-0.5
1,026,397	+				-1.3
1,026,397	+				-0.9
1,026,397	+				-0.9
1,026,397	+				-0.2
1,026,397	+				-0.9
1,026,397	+				-0.8
1,026,397	+				-0.2
1,026,397	+				-3.5
1,026,397	+				+1.3
1,026,398	-				-0.7
1,026,398	-				-1.1
1,026,398	-				-1.4
1,026,398	-				-1.1
1,026,398	-				+1.2
1,026,398	-				-2.2
1,026,398	-				+0.6
1,026,398	-				-1.9
1,026,398	-				-0.9
1,026,398	-				-1.5
1,026,398	-				-0.3
1,026,398	-				-0.2
1,026,398	-				-1.6
1,026,398	-				-0.2
1,026,398	-				-1.7
1,026,401	+				-0.5
1,026,401	+				+1.1
1,026,401	+				+0.8
1,026,401	+				+0.1
1,026,401	+				+0.5
1,026,401	+				-1.7
1,026,402	-				+0.7
1,026,402	-				-1.8
1,026,402	-				-1.2
1,026,402	-				-0.4
1,026,402	-				+1.1
1,026,402	-				-0.1
1,026,402	-				-2.1
1,026,402	-				+0.4
1,026,402	-				-0.1
1,026,431	+				+0.5
1,026,432	-				-1.9
1,026,432	-				-2.1
1,026,432	-				+1.2
1,026,445	+				+0.1
1,026,445	+				+1.2
1,026,445	+				-1.2
1,026,445	+				-1.5
1,026,445	+				+0.1
1,026,513	+		LRK53_RS04415	0.14	-0.7
1,026,513	+		LRK53_RS04415	0.14	-0.4
1,026,513	+		LRK53_RS04415	0.14	-0.2
1,026,513	+		LRK53_RS04415	0.14	-2.5
1,026,513	+		LRK53_RS04415	0.14	-0.9
1,026,513	+		LRK53_RS04415	0.14	-0.2
1,026,514	-		LRK53_RS04415	0.14	+0.3
1,026,514	-		LRK53_RS04415	0.14	+1.9
1,026,669	+		LRK53_RS04415	0.28	-0.2
1,026,669	+		LRK53_RS04415	0.28	-2.5
1,026,669	+		LRK53_RS04415	0.28	-1.1
1,026,669	+		LRK53_RS04415	0.28	-1.0
1,026,670	-		LRK53_RS04415	0.28	-0.9
1,026,670	-		LRK53_RS04415	0.28	+1.2
1,026,670	-		LRK53_RS04415	0.28	-2.3
1,026,681	+		LRK53_RS04415	0.29	-2.3
1,026,681	+		LRK53_RS04415	0.29	+0.3
1,026,681	+		LRK53_RS04415	0.29	-0.7
1,026,681	+		LRK53_RS04415	0.29	-2.2
1,026,681	+		LRK53_RS04415	0.29	-1.2
1,026,681	+		LRK53_RS04415	0.29	-0.7
1,026,681	+		LRK53_RS04415	0.29	-0.5
1,026,681	+		LRK53_RS04415	0.29	+0.1
1,026,681	+		LRK53_RS04415	0.29	+0.8
1,026,681	+		LRK53_RS04415	0.29	-2.1
1,026,681	+		LRK53_RS04415	0.29	-0.5
1,026,681	+		LRK53_RS04415	0.29	+0.1
1,026,681	+		LRK53_RS04415	0.29	-2.3
1,026,682	-		LRK53_RS04415	0.29	+0.0
1,026,682	-		LRK53_RS04415	0.29	-1.0
1,026,682	-		LRK53_RS04415	0.29	-1.3
1,026,682	-		LRK53_RS04415	0.29	+0.3
1,026,682	-		LRK53_RS04415	0.29	+1.1
1,026,682	-		LRK53_RS04415	0.29	-0.5
1,026,682	-		LRK53_RS04415	0.29	-1.0
1,026,682	-		LRK53_RS04415	0.29	-1.6
1,026,682	-		LRK53_RS04415	0.29	-1.2
1,026,682	-		LRK53_RS04415	0.29	+0.6
1,026,682	-		LRK53_RS04415	0.29	-0.8
1,026,682	-		LRK53_RS04415	0.29	-1.6
1,026,682	-		LRK53_RS04415	0.29	-1.5
1,026,682	-		LRK53_RS04415	0.29	-0.4
1,026,682	-		LRK53_RS04415	0.29	+0.1
1,026,682	-		LRK53_RS04415	0.29	-0.8
1,026,682	-		LRK53_RS04415	0.29	-0.4
1,026,682	-		LRK53_RS04415	0.29	-0.1
1,026,682	-		LRK53_RS04415	0.29	+0.1
1,026,682	-		LRK53_RS04415	0.29	-4.3
1,026,685	+		LRK53_RS04415	0.30	-0.2
1,026,685	+		LRK53_RS04415	0.30	+1.2
1,026,686	-		LRK53_RS04415	0.30	+0.2
1,026,686	-		LRK53_RS04415	0.30	+0.3
1,026,686	-		LRK53_RS04415	0.30	+1.7
1,026,686	-		LRK53_RS04415	0.30	-2.4
1,026,717	+		LRK53_RS04415	0.33	-1.8
1,026,718	-		LRK53_RS04415	0.33	-1.5
1,026,889	+		LRK53_RS04415	0.48	-1.0
1,026,889	+		LRK53_RS04415	0.48	+1.4
1,026,889	+		LRK53_RS04415	0.48	-0.7
1,026,889	+		LRK53_RS04415	0.48	+0.3
1,026,889	+		LRK53_RS04415	0.48	-1.3
1,026,889	+		LRK53_RS04415	0.48	-0.1
1,026,889	+		LRK53_RS04415	0.48	-0.5
1,026,889	+		LRK53_RS04415	0.48	-1.9
1,026,890	-		LRK53_RS04415	0.48	+0.1
1,026,890	-		LRK53_RS04415	0.48	+0.1
1,026,890	-		LRK53_RS04415	0.48	-0.1
1,026,890	-		LRK53_RS04415	0.48	-0.4
1,026,890	-		LRK53_RS04415	0.48	-1.6
1,026,890	-		LRK53_RS04415	0.48	+0.1
1,026,890	-		LRK53_RS04415	0.48	+0.6
1,026,890	-		LRK53_RS04415	0.48	+0.3
1,026,892	+		LRK53_RS04415	0.48	-0.3
1,026,892	+		LRK53_RS04415	0.48	-2.0
1,026,892	+		LRK53_RS04415	0.48	-0.4
1,026,892	+		LRK53_RS04415	0.48	-0.5
1,026,892	+		LRK53_RS04415	0.48	-0.4
1,026,892	+		LRK53_RS04415	0.48	-0.9
1,026,892	+		LRK53_RS04415	0.48	-0.8
1,026,892	+		LRK53_RS04415	0.48	-2.5
1,026,892	+		LRK53_RS04415	0.48	-0.4
1,026,892	+		LRK53_RS04415	0.48	-0.1
1,026,893	-		LRK53_RS04415	0.48	+0.1
1,026,893	-		LRK53_RS04415	0.48	-1.5
1,026,893	-		LRK53_RS04415	0.48	+0.0
1,026,893	-		LRK53_RS04415	0.48	+0.1
1,026,893	-		LRK53_RS04415	0.48	-1.6
1,026,893	-		LRK53_RS04415	0.48	-0.2
1,026,893	-		LRK53_RS04415	0.48	-0.4
1,026,893	-		LRK53_RS04415	0.48	-0.1
1,026,893	-		LRK53_RS04415	0.48	-1.0
1,026,952	+		LRK53_RS04415	0.54	-1.2
1,026,952	+		LRK53_RS04415	0.54	-0.1
1,026,953	-		LRK53_RS04415	0.54	-0.4
1,026,953	-		LRK53_RS04415	0.54	-0.4
1,026,953	-		LRK53_RS04415	0.54	-2.8
1,026,953	-		LRK53_RS04415	0.54	-1.3
1,027,027	+		LRK53_RS04415	0.60	-1.5
1,027,028	-		LRK53_RS04415	0.60	-1.9
1,027,028	-		LRK53_RS04415	0.60	+0.3
1,027,028	-		LRK53_RS04415	0.60	+2.5
1,027,048	+		LRK53_RS04415	0.62	-0.5
1,027,048	+		LRK53_RS04415	0.62	+0.0
1,027,048	+		LRK53_RS04415	0.62	-2.0
1,027,048	+		LRK53_RS04415	0.62	-0.6
1,027,049	-		LRK53_RS04415	0.62	+0.9
1,027,049	-		LRK53_RS04415	0.62	-0.7
1,027,049	-		LRK53_RS04415	0.62	-2.8
1,027,049	-		LRK53_RS04415	0.62	+0.9
1,027,070	+		LRK53_RS04415	0.64	-0.8
1,027,070	+		LRK53_RS04415	0.64	-0.8
1,027,070	+		LRK53_RS04415	0.64	-2.9
1,027,070	+		LRK53_RS04415	0.64	-0.9
1,027,070	+		LRK53_RS04415	0.64	-2.7
1,027,070	+		LRK53_RS04415	0.64	-0.7
1,027,071	-		LRK53_RS04415	0.64	-0.5
1,027,071	-		LRK53_RS04415	0.64	-1.0
1,027,113	-		LRK53_RS04415	0.68	+0.9
1,027,153	-		LRK53_RS04415	0.72	+2.0
1,027,153	-		LRK53_RS04415	0.72	-2.1
1,027,153	-		LRK53_RS04415	0.72	-0.2
1,027,175	+		LRK53_RS04415	0.74	-0.2
1,027,175	+		LRK53_RS04415	0.74	-3.0
1,027,175	+		LRK53_RS04415	0.74	-1.4
1,027,196	+		LRK53_RS04415	0.75	-0.5
1,027,203	+		LRK53_RS04415	0.76	-0.5
1,027,204	-		LRK53_RS04415	0.76	+0.6
1,027,306	+		LRK53_RS04415	0.85	-2.2
1,027,306	+		LRK53_RS04415	0.85	-0.7
1,027,306	+		LRK53_RS04415	0.85	-0.2
1,027,307	-		LRK53_RS04415	0.85	-0.1
1,027,360	+				+0.6
1,027,360	+				-3.1
1,027,360	+				+0.0
1,027,361	-				-0.8
1,027,361	-				-2.8
1,027,361	-				-1.3
1,027,361	-				-2.8
1,027,361	-				+0.1
1,027,366	+				+0.3
1,027,366	+				-2.0
1,027,367	-				+1.2
1,027,367	-				+0.0
1,027,367	-				+0.1
1,027,367	-				-0.2
1,027,464	-				-0.6
1,027,475	+				-0.7
1,027,476	-				-0.2
1,027,476	-				+0.9
1,027,562	+				+1.2
1,027,562	+				-3.0
1,027,562	+				-0.9
1,027,563	-				-0.3
1,027,563	-				+1.5
1,027,563	-				+0.6
1,027,563	-				-0.9
1,027,563	-				-0.3
1,027,604	+		LRK53_RS04420	0.13	-1.7
1,027,604	+		LRK53_RS04420	0.13	-0.4
1,027,604	+		LRK53_RS04420	0.13	+0.1
1,027,604	+		LRK53_RS04420	0.13	+2.5
1,027,605	-		LRK53_RS04420	0.13	-2.7
1,027,613	+		LRK53_RS04420	0.14	-0.9
1,027,613	+		LRK53_RS04420	0.14	+0.8
1,027,613	+		LRK53_RS04420	0.14	+0.8
1,027,613	+		LRK53_RS04420	0.14	+1.1
1,027,613	+		LRK53_RS04420	0.14	+0.9
1,027,614	-		LRK53_RS04420	0.14	-1.5
1,027,614	-		LRK53_RS04420	0.14	-0.1
1,027,614	-		LRK53_RS04420	0.14	-0.1
1,027,614	-		LRK53_RS04420	0.14	-1.5
1,027,614	-		LRK53_RS04420	0.14	-1.1
1,027,641	+		LRK53_RS04420	0.16	-0.9
1,027,641	+		LRK53_RS04420	0.16	+0.3
1,027,641	+		LRK53_RS04420	0.16	-1.6
1,027,641	+		LRK53_RS04420	0.16	-0.5
1,027,642	-		LRK53_RS04420	0.17	-0.4
1,027,646	+		LRK53_RS04420	0.17	-0.6
1,027,647	-		LRK53_RS04420	0.17	+2.2
1,027,647	-		LRK53_RS04420	0.17	-2.8
1,027,647	-		LRK53_RS04420	0.17	-2.2
1,027,647	-		LRK53_RS04420	0.17	-1.0
1,027,647	-		LRK53_RS04420	0.17	+0.9
1,027,650	-		LRK53_RS04420	0.17	+0.9
1,027,705	+		LRK53_RS04420	0.23	-1.3
1,027,705	+		LRK53_RS04420	0.23	-0.1
1,027,705	+		LRK53_RS04420	0.23	-1.1
1,027,706	-		LRK53_RS04420	0.23	-2.5
1,027,706	-		LRK53_RS04420	0.23	-1.1
1,027,706	-		LRK53_RS04420	0.23	-1.0
1,027,706	-		LRK53_RS04420	0.23	-0.1
1,027,706	-		LRK53_RS04420	0.23	+0.6
1,027,706	-		LRK53_RS04420	0.23	-2.7
1,027,706	-		LRK53_RS04420	0.23	-2.1
1,027,781	-		LRK53_RS04420	0.30	-0.1
1,027,781	-		LRK53_RS04420	0.30	-1.4
1,027,986	+		LRK53_RS04420	0.50	-1.5
1,028,097	-		LRK53_RS04420	0.61	-1.3
1,028,134	+		LRK53_RS04420	0.65	+0.1
1,028,134	+		LRK53_RS04420	0.65	+0.4
1,028,135	-		LRK53_RS04420	0.65	+1.4
1,028,135	-		LRK53_RS04420	0.65	-1.3
1,028,208	-		LRK53_RS04420	0.72	+2.0
1,028,208	-		LRK53_RS04420	0.72	-2.0
1,028,208	-		LRK53_RS04420	0.72	-0.6
1,028,208	-		LRK53_RS04420	0.72	+1.3
1,028,255	+		LRK53_RS04420	0.77	-0.8
1,028,256	-		LRK53_RS04420	0.77	-1.7
1,028,279	+		LRK53_RS04420	0.79	+1.5
1,028,279	+		LRK53_RS04420	0.79	+1.6
1,028,279	+		LRK53_RS04420	0.79	-0.1
1,028,279	+		LRK53_RS04420	0.79	-0.3
1,028,280	-		LRK53_RS04420	0.79	-0.4
1,028,280	-		LRK53_RS04420	0.79	-1.7
1,028,280	-		LRK53_RS04420	0.79	-1.1
1,028,280	-		LRK53_RS04420	0.79	-0.1
1,028,280	-		LRK53_RS04420	0.79	-1.7
1,028,312	+		LRK53_RS04420	0.82	-1.8
1,028,313	-		LRK53_RS04420	0.82	-0.9
1,028,326	-		LRK53_RS04420	0.84	-0.1
1,028,326	-		LRK53_RS04420	0.84	+0.5
1,028,326	-		LRK53_RS04420	0.84	+0.9
1,028,326	-		LRK53_RS04420	0.84	-1.2
1,028,326	-		LRK53_RS04420	0.84	-0.1
1,028,380	+		LRK53_RS04420	0.89	-1.6
1,028,381	-		LRK53_RS04420	0.89	-2.7
1,028,386	+		LRK53_RS04420	0.90	-1.5
1,028,386	+		LRK53_RS04420	0.90	-1.1
1,028,386	+		LRK53_RS04420	0.90	-0.5
1,028,387	-		LRK53_RS04420	0.90	-0.2
1,028,387	-		LRK53_RS04420	0.90	-3.4
1,028,387	-		LRK53_RS04420	0.90	-0.2
1,028,387	-		LRK53_RS04420	0.90	-1.2