Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS22880 and QEN71_RS22885 are separated by 331 nucleotides QEN71_RS22885 and QEN71_RS22890 are separated by 462 nucleotides
QEN71_RS22880: QEN71_RS22880 - methyltransferase, TIGR04325 family, at 5,081,564 to 5,082,415
_RS22880
QEN71_RS22885: QEN71_RS22885 - acyltransferase, at 5,082,747 to 5,083,781
_RS22885
QEN71_RS22890: QEN71_RS22890 - GNVR domain-containing protein, at 5,084,244 to 5,086,496
_RS22890
Position (kb) 5082
5083
5084 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5081.886 kb on + strand, within QEN71_RS22880 at 5081.886 kb on + strand, within QEN71_RS22880 at 5081.887 kb on - strand, within QEN71_RS22880 at 5081.887 kb on - strand, within QEN71_RS22880 at 5082.054 kb on + strand, within QEN71_RS22880 at 5082.246 kb on + strand, within QEN71_RS22880 at 5082.247 kb on - strand, within QEN71_RS22880 at 5082.285 kb on + strand, within QEN71_RS22880 at 5082.297 kb on + strand, within QEN71_RS22880 at 5082.297 kb on + strand, within QEN71_RS22880 at 5082.297 kb on + strand, within QEN71_RS22880 at 5082.298 kb on - strand, within QEN71_RS22880 at 5082.298 kb on - strand, within QEN71_RS22880 at 5082.334 kb on - strand at 5082.382 kb on + strand at 5082.383 kb on - strand at 5082.463 kb on + strand at 5082.464 kb on - strand at 5082.500 kb on - strand at 5082.500 kb on - strand at 5082.500 kb on - strand at 5082.502 kb on + strand at 5082.503 kb on - strand at 5082.577 kb on + strand at 5082.577 kb on + strand at 5082.578 kb on - strand at 5082.578 kb on - strand at 5082.683 kb on - strand at 5082.692 kb on + strand at 5082.693 kb on - strand at 5082.725 kb on - strand at 5082.725 kb on - strand at 5082.725 kb on - strand at 5082.757 kb on + strand at 5082.757 kb on + strand at 5082.757 kb on + strand at 5082.757 kb on + strand at 5082.758 kb on - strand at 5082.758 kb on - strand at 5082.758 kb on - strand at 5082.758 kb on - strand at 5082.758 kb on - strand at 5082.807 kb on + strand at 5082.807 kb on + strand at 5082.807 kb on + strand at 5082.807 kb on + strand at 5082.963 kb on + strand, within QEN71_RS22885 at 5083.131 kb on + strand, within QEN71_RS22885 at 5083.132 kb on - strand, within QEN71_RS22885 at 5083.146 kb on + strand, within QEN71_RS22885 at 5083.147 kb on - strand, within QEN71_RS22885 at 5083.147 kb on - strand, within QEN71_RS22885 at 5083.272 kb on + strand, within QEN71_RS22885 at 5083.272 kb on + strand, within QEN71_RS22885 at 5083.272 kb on + strand, within QEN71_RS22885 at 5083.272 kb on + strand, within QEN71_RS22885 at 5083.272 kb on + strand, within QEN71_RS22885 at 5083.273 kb on - strand, within QEN71_RS22885 at 5083.273 kb on - strand, within QEN71_RS22885 at 5083.273 kb on - strand, within QEN71_RS22885 at 5083.273 kb on - strand, within QEN71_RS22885 at 5083.279 kb on - strand, within QEN71_RS22885 at 5083.317 kb on + strand, within QEN71_RS22885 at 5083.344 kb on - strand, within QEN71_RS22885 at 5083.383 kb on + strand, within QEN71_RS22885 at 5083.383 kb on + strand, within QEN71_RS22885 at 5083.384 kb on - strand, within QEN71_RS22885 at 5083.384 kb on - strand, within QEN71_RS22885 at 5083.384 kb on - strand, within QEN71_RS22885 at 5083.384 kb on - strand, within QEN71_RS22885 at 5083.384 kb on - strand, within QEN71_RS22885 at 5083.387 kb on + strand, within QEN71_RS22885 at 5083.387 kb on + strand, within QEN71_RS22885 at 5083.388 kb on - strand, within QEN71_RS22885 at 5083.388 kb on - strand, within QEN71_RS22885 at 5083.388 kb on - strand, within QEN71_RS22885 at 5083.398 kb on + strand, within QEN71_RS22885 at 5083.398 kb on + strand, within QEN71_RS22885 at 5083.398 kb on + strand, within QEN71_RS22885 at 5083.399 kb on - strand, within QEN71_RS22885 at 5083.399 kb on - strand, within QEN71_RS22885 at 5083.399 kb on - strand, within QEN71_RS22885 at 5083.399 kb on - strand, within QEN71_RS22885 at 5083.437 kb on + strand, within QEN71_RS22885 at 5083.438 kb on - strand, within QEN71_RS22885 at 5083.545 kb on + strand, within QEN71_RS22885 at 5083.545 kb on + strand, within QEN71_RS22885 at 5083.545 kb on + strand, within QEN71_RS22885 at 5083.545 kb on + strand, within QEN71_RS22885 at 5083.554 kb on + strand, within QEN71_RS22885 at 5083.554 kb on + strand, within QEN71_RS22885 at 5083.555 kb on - strand, within QEN71_RS22885 at 5083.686 kb on + strand at 5083.687 kb on - strand at 5083.780 kb on - strand at 5083.995 kb on + strand at 5083.996 kb on - strand at 5084.181 kb on + strand at 5084.181 kb on + strand at 5084.182 kb on - strand at 5084.182 kb on - strand at 5084.182 kb on - strand at 5084.182 kb on - strand at 5084.300 kb on - strand at 5084.300 kb on - strand at 5084.309 kb on - strand at 5084.314 kb on + strand at 5084.314 kb on + strand at 5084.314 kb on + strand at 5084.314 kb on + strand at 5084.315 kb on - strand at 5084.315 kb on - strand at 5084.323 kb on + strand at 5084.335 kb on + strand at 5084.336 kb on - strand at 5084.543 kb on - strand, within QEN71_RS22890 at 5084.582 kb on + strand, within QEN71_RS22890 at 5084.583 kb on - strand, within QEN71_RS22890 at 5084.583 kb on - strand, within QEN71_RS22890 at 5084.614 kb on + strand, within QEN71_RS22890 at 5084.614 kb on + strand, within QEN71_RS22890 at 5084.615 kb on - strand, within QEN71_RS22890 at 5084.661 kb on + strand, within QEN71_RS22890 at 5084.728 kb on + strand, within QEN71_RS22890 at 5084.728 kb on + strand, within QEN71_RS22890 at 5084.728 kb on + strand, within QEN71_RS22890 at 5084.728 kb on + strand, within QEN71_RS22890 at 5084.728 kb on + strand, within QEN71_RS22890 at 5084.729 kb on - strand, within QEN71_RS22890 at 5084.729 kb on - strand, within QEN71_RS22890 at 5084.729 kb on - strand, within QEN71_RS22890
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 5,081,886 + QEN71_RS22880 0.38 +0.4 5,081,886 + QEN71_RS22880 0.38 -0.4 5,081,887 - QEN71_RS22880 0.38 -0.6 5,081,887 - QEN71_RS22880 0.38 +0.6 5,082,054 + QEN71_RS22880 0.58 -0.8 5,082,246 + QEN71_RS22880 0.80 -0.1 5,082,247 - QEN71_RS22880 0.80 +0.7 5,082,285 + QEN71_RS22880 0.85 +0.3 5,082,297 + QEN71_RS22880 0.86 -1.2 5,082,297 + QEN71_RS22880 0.86 -0.0 5,082,297 + QEN71_RS22880 0.86 -0.6 5,082,298 - QEN71_RS22880 0.86 -1.5 5,082,298 - QEN71_RS22880 0.86 -0.1 5,082,334 - +0.8 5,082,382 + -0.4 5,082,383 - +0.2 5,082,463 + +1.5 5,082,464 - -0.1 5,082,500 - +0.0 5,082,500 - -1.2 5,082,500 - -1.4 5,082,502 + -2.8 5,082,503 - -2.2 5,082,577 + +1.0 5,082,577 + -0.5 5,082,578 - -0.2 5,082,578 - -0.4 5,082,683 - +0.6 5,082,692 + -1.3 5,082,693 - +1.6 5,082,725 - -0.6 5,082,725 - -0.7 5,082,725 - -1.7 5,082,757 + -1.1 5,082,757 + +0.3 5,082,757 + -2.8 5,082,757 + -0.1 5,082,758 - -1.0 5,082,758 - +2.2 5,082,758 - +0.4 5,082,758 - -0.8 5,082,758 - +1.5 5,082,807 + +0.3 5,082,807 + +1.0 5,082,807 + +0.1 5,082,807 + -1.2 5,082,963 + QEN71_RS22885 0.21 -0.8 5,083,131 + QEN71_RS22885 0.37 -1.2 5,083,132 - QEN71_RS22885 0.37 -1.0 5,083,146 + QEN71_RS22885 0.39 -0.8 5,083,147 - QEN71_RS22885 0.39 +0.4 5,083,147 - QEN71_RS22885 0.39 -1.0 5,083,272 + QEN71_RS22885 0.51 +0.2 5,083,272 + QEN71_RS22885 0.51 -0.3 5,083,272 + QEN71_RS22885 0.51 +1.4 5,083,272 + QEN71_RS22885 0.51 +0.6 5,083,272 + QEN71_RS22885 0.51 -1.1 5,083,273 - QEN71_RS22885 0.51 -0.3 5,083,273 - QEN71_RS22885 0.51 +0.4 5,083,273 - QEN71_RS22885 0.51 +0.1 5,083,273 - QEN71_RS22885 0.51 -0.0 5,083,279 - QEN71_RS22885 0.51 +1.3 5,083,317 + QEN71_RS22885 0.55 -1.3 5,083,344 - QEN71_RS22885 0.58 -1.2 5,083,383 + QEN71_RS22885 0.61 -1.3 5,083,383 + QEN71_RS22885 0.61 +0.5 5,083,384 - QEN71_RS22885 0.62 -0.1 5,083,384 - QEN71_RS22885 0.62 +0.9 5,083,384 - QEN71_RS22885 0.62 -0.1 5,083,384 - QEN71_RS22885 0.62 +1.5 5,083,384 - QEN71_RS22885 0.62 +0.7 5,083,387 + QEN71_RS22885 0.62 +2.4 5,083,387 + QEN71_RS22885 0.62 +0.8 5,083,388 - QEN71_RS22885 0.62 +1.6 5,083,388 - QEN71_RS22885 0.62 -0.6 5,083,388 - QEN71_RS22885 0.62 +0.4 5,083,398 + QEN71_RS22885 0.63 -0.8 5,083,398 + QEN71_RS22885 0.63 -0.0 5,083,398 + QEN71_RS22885 0.63 -0.0 5,083,399 - QEN71_RS22885 0.63 +1.0 5,083,399 - QEN71_RS22885 0.63 +0.4 5,083,399 - QEN71_RS22885 0.63 -2.1 5,083,399 - QEN71_RS22885 0.63 -0.6 5,083,437 + QEN71_RS22885 0.67 +0.1 5,083,438 - QEN71_RS22885 0.67 -0.6 5,083,545 + QEN71_RS22885 0.77 -0.1 5,083,545 + QEN71_RS22885 0.77 +0.4 5,083,545 + QEN71_RS22885 0.77 -0.6 5,083,545 + QEN71_RS22885 0.77 -0.1 5,083,554 + QEN71_RS22885 0.78 -1.4 5,083,554 + QEN71_RS22885 0.78 +0.4 5,083,555 - QEN71_RS22885 0.78 -0.1 5,083,686 + +2.8 5,083,687 - +0.2 5,083,780 - -1.1 5,083,995 + -0.0 5,083,996 - -1.0 5,084,181 + -0.2 5,084,181 + -0.8 5,084,182 - -0.9 5,084,182 - +0.0 5,084,182 - +0.8 5,084,182 - -0.4 5,084,300 - -1.8 5,084,300 - +0.2 5,084,309 - -0.4 5,084,314 + -1.4 5,084,314 + +1.0 5,084,314 + -0.7 5,084,314 + +1.3 5,084,315 - +0.5 5,084,315 - +0.8 5,084,323 + -0.8 5,084,335 + -0.1 5,084,336 - -0.7 5,084,543 - QEN71_RS22890 0.13 -0.5 5,084,582 + QEN71_RS22890 0.15 -0.1 5,084,583 - QEN71_RS22890 0.15 -1.2 5,084,583 - QEN71_RS22890 0.15 -0.4 5,084,614 + QEN71_RS22890 0.16 -0.5 5,084,614 + QEN71_RS22890 0.16 -0.2 5,084,615 - QEN71_RS22890 0.16 -0.8 5,084,661 + QEN71_RS22890 0.19 -0.1 5,084,728 + QEN71_RS22890 0.21 -1.2 5,084,728 + QEN71_RS22890 0.21 -0.7 5,084,728 + QEN71_RS22890 0.21 -0.0 5,084,728 + QEN71_RS22890 0.21 +0.8 5,084,728 + QEN71_RS22890 0.21 -1.2 5,084,729 - QEN71_RS22890 0.22 +0.4 5,084,729 - QEN71_RS22890 0.22 -0.8 5,084,729 - QEN71_RS22890 0.22 -0.3
Or see this region's nucleotide sequence