Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21405 and QEN71_RS21410 are separated by 9 nucleotides QEN71_RS21410 and QEN71_RS21415 are separated by 154 nucleotides QEN71_RS21415 and QEN71_RS21420 are separated by 35 nucleotides
QEN71_RS21405: QEN71_RS21405 - glutamine--fructose-6-phosphate transaminase (isomerizing), at 4,744,459 to 4,746,288
_RS21405
QEN71_RS21410: QEN71_RS21410 - hypothetical protein, at 4,746,298 to 4,747,524
_RS21410
QEN71_RS21415: QEN71_RS21415 - GFA family protein, at 4,747,679 to 4,748,050
_RS21415
QEN71_RS21420: QEN71_RS21420 - response regulator, at 4,748,086 to 4,748,832
_RS21420
Position (kb) 4746
4747
4748 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4745.368 kb on + strand, within QEN71_RS21405 at 4745.368 kb on + strand, within QEN71_RS21405 at 4745.693 kb on + strand, within QEN71_RS21405 at 4745.693 kb on + strand, within QEN71_RS21405 at 4745.695 kb on + strand, within QEN71_RS21405 at 4745.695 kb on + strand, within QEN71_RS21405 at 4745.696 kb on - strand, within QEN71_RS21405 at 4745.796 kb on + strand, within QEN71_RS21405 at 4745.797 kb on - strand, within QEN71_RS21405 at 4745.932 kb on + strand, within QEN71_RS21405 at 4745.933 kb on - strand, within QEN71_RS21405 at 4745.933 kb on - strand, within QEN71_RS21405 at 4746.164 kb on - strand at 4746.436 kb on + strand, within QEN71_RS21410 at 4746.436 kb on + strand, within QEN71_RS21410 at 4746.436 kb on + strand, within QEN71_RS21410 at 4746.436 kb on + strand, within QEN71_RS21410 at 4746.437 kb on - strand, within QEN71_RS21410 at 4746.437 kb on - strand, within QEN71_RS21410 at 4746.437 kb on - strand, within QEN71_RS21410 at 4746.437 kb on - strand, within QEN71_RS21410 at 4746.553 kb on + strand, within QEN71_RS21410 at 4746.554 kb on - strand, within QEN71_RS21410 at 4746.554 kb on - strand, within QEN71_RS21410 at 4746.554 kb on - strand, within QEN71_RS21410 at 4746.554 kb on - strand, within QEN71_RS21410 at 4746.554 kb on - strand, within QEN71_RS21410 at 4746.727 kb on + strand, within QEN71_RS21410 at 4746.727 kb on + strand, within QEN71_RS21410 at 4746.728 kb on - strand, within QEN71_RS21410 at 4746.728 kb on - strand, within QEN71_RS21410 at 4746.728 kb on - strand, within QEN71_RS21410 at 4746.729 kb on + strand, within QEN71_RS21410 at 4746.729 kb on + strand, within QEN71_RS21410 at 4746.729 kb on + strand, within QEN71_RS21410 at 4746.729 kb on + strand, within QEN71_RS21410 at 4746.730 kb on - strand, within QEN71_RS21410 at 4746.730 kb on - strand, within QEN71_RS21410 at 4746.730 kb on - strand, within QEN71_RS21410 at 4746.730 kb on - strand, within QEN71_RS21410 at 4746.730 kb on - strand, within QEN71_RS21410 at 4746.829 kb on + strand, within QEN71_RS21410 at 4746.829 kb on + strand, within QEN71_RS21410 at 4746.889 kb on + strand, within QEN71_RS21410 at 4746.902 kb on - strand, within QEN71_RS21410 at 4747.012 kb on + strand, within QEN71_RS21410 at 4747.012 kb on + strand, within QEN71_RS21410 at 4747.012 kb on + strand, within QEN71_RS21410 at 4747.013 kb on - strand, within QEN71_RS21410 at 4747.013 kb on - strand, within QEN71_RS21410 at 4747.013 kb on - strand, within QEN71_RS21410 at 4747.013 kb on - strand, within QEN71_RS21410 at 4747.030 kb on + strand, within QEN71_RS21410 at 4747.030 kb on + strand, within QEN71_RS21410 at 4747.030 kb on + strand, within QEN71_RS21410 at 4747.030 kb on + strand, within QEN71_RS21410 at 4747.031 kb on - strand, within QEN71_RS21410 at 4747.031 kb on - strand, within QEN71_RS21410 at 4747.031 kb on - strand, within QEN71_RS21410 at 4747.031 kb on - strand, within QEN71_RS21410 at 4747.111 kb on + strand, within QEN71_RS21410 at 4747.111 kb on + strand, within QEN71_RS21410 at 4747.112 kb on - strand, within QEN71_RS21410 at 4747.114 kb on + strand, within QEN71_RS21410 at 4747.114 kb on + strand, within QEN71_RS21410 at 4747.115 kb on - strand, within QEN71_RS21410 at 4747.120 kb on + strand, within QEN71_RS21410 at 4747.120 kb on + strand, within QEN71_RS21410 at 4747.132 kb on + strand, within QEN71_RS21410 at 4747.132 kb on + strand, within QEN71_RS21410 at 4747.132 kb on + strand, within QEN71_RS21410 at 4747.132 kb on + strand, within QEN71_RS21410 at 4747.133 kb on - strand, within QEN71_RS21410 at 4747.133 kb on - strand, within QEN71_RS21410 at 4747.361 kb on + strand, within QEN71_RS21410 at 4747.362 kb on - strand, within QEN71_RS21410 at 4747.388 kb on - strand, within QEN71_RS21410 at 4747.388 kb on - strand, within QEN71_RS21410 at 4747.388 kb on - strand, within QEN71_RS21410 at 4747.555 kb on + strand at 4747.555 kb on + strand at 4747.556 kb on - strand at 4747.556 kb on - strand at 4747.556 kb on - strand at 4747.556 kb on - strand at 4747.568 kb on - strand at 4747.612 kb on + strand at 4747.613 kb on - strand at 4747.613 kb on - strand at 4747.613 kb on - strand at 4747.613 kb on - strand at 4747.646 kb on + strand at 4747.862 kb on + strand, within QEN71_RS21415 at 4747.873 kb on + strand, within QEN71_RS21415 at 4747.873 kb on + strand, within QEN71_RS21415 at 4747.874 kb on - strand, within QEN71_RS21415 at 4747.893 kb on - strand, within QEN71_RS21415 at 4747.893 kb on - strand, within QEN71_RS21415 at 4747.917 kb on - strand, within QEN71_RS21415 at 4747.917 kb on - strand, within QEN71_RS21415 at 4747.917 kb on - strand, within QEN71_RS21415 at 4747.917 kb on - strand, within QEN71_RS21415 at 4747.964 kb on - strand, within QEN71_RS21415 at 4747.992 kb on - strand, within QEN71_RS21415 at 4748.053 kb on + strand at 4748.053 kb on + strand at 4748.053 kb on + strand at 4748.054 kb on - strand at 4748.092 kb on - strand at 4748.153 kb on - strand at 4748.153 kb on - strand at 4748.164 kb on - strand, within QEN71_RS21420 at 4748.392 kb on + strand, within QEN71_RS21420 at 4748.392 kb on + strand, within QEN71_RS21420 at 4748.393 kb on - strand, within QEN71_RS21420
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 4,745,368 + QEN71_RS21405 0.50 +0.3 4,745,368 + QEN71_RS21405 0.50 +0.1 4,745,693 + QEN71_RS21405 0.67 -0.9 4,745,693 + QEN71_RS21405 0.67 -0.8 4,745,695 + QEN71_RS21405 0.68 -0.2 4,745,695 + QEN71_RS21405 0.68 +0.8 4,745,696 - QEN71_RS21405 0.68 -0.1 4,745,796 + QEN71_RS21405 0.73 -1.1 4,745,797 - QEN71_RS21405 0.73 -1.1 4,745,932 + QEN71_RS21405 0.80 -0.2 4,745,933 - QEN71_RS21405 0.81 +0.4 4,745,933 - QEN71_RS21405 0.81 +1.3 4,746,164 - -0.4 4,746,436 + QEN71_RS21410 0.11 +0.5 4,746,436 + QEN71_RS21410 0.11 +0.0 4,746,436 + QEN71_RS21410 0.11 -0.3 4,746,436 + QEN71_RS21410 0.11 -0.9 4,746,437 - QEN71_RS21410 0.11 +0.2 4,746,437 - QEN71_RS21410 0.11 -2.3 4,746,437 - QEN71_RS21410 0.11 +0.8 4,746,437 - QEN71_RS21410 0.11 -1.5 4,746,553 + QEN71_RS21410 0.21 -0.1 4,746,554 - QEN71_RS21410 0.21 -0.4 4,746,554 - QEN71_RS21410 0.21 -0.7 4,746,554 - QEN71_RS21410 0.21 -0.0 4,746,554 - QEN71_RS21410 0.21 +1.5 4,746,554 - QEN71_RS21410 0.21 -0.1 4,746,727 + QEN71_RS21410 0.35 +0.2 4,746,727 + QEN71_RS21410 0.35 -1.3 4,746,728 - QEN71_RS21410 0.35 -0.1 4,746,728 - QEN71_RS21410 0.35 -0.1 4,746,728 - QEN71_RS21410 0.35 +0.8 4,746,729 + QEN71_RS21410 0.35 -0.1 4,746,729 + QEN71_RS21410 0.35 +2.3 4,746,729 + QEN71_RS21410 0.35 -0.1 4,746,729 + QEN71_RS21410 0.35 -1.7 4,746,730 - QEN71_RS21410 0.35 -0.5 4,746,730 - QEN71_RS21410 0.35 -0.6 4,746,730 - QEN71_RS21410 0.35 +0.1 4,746,730 - QEN71_RS21410 0.35 -1.7 4,746,730 - QEN71_RS21410 0.35 -0.4 4,746,829 + QEN71_RS21410 0.43 +0.2 4,746,829 + QEN71_RS21410 0.43 -0.9 4,746,889 + QEN71_RS21410 0.48 +0.1 4,746,902 - QEN71_RS21410 0.49 +0.8 4,747,012 + QEN71_RS21410 0.58 +1.8 4,747,012 + QEN71_RS21410 0.58 +0.6 4,747,012 + QEN71_RS21410 0.58 -0.5 4,747,013 - QEN71_RS21410 0.58 -1.1 4,747,013 - QEN71_RS21410 0.58 +0.2 4,747,013 - QEN71_RS21410 0.58 -0.4 4,747,013 - QEN71_RS21410 0.58 +1.3 4,747,030 + QEN71_RS21410 0.60 +0.4 4,747,030 + QEN71_RS21410 0.60 -0.2 4,747,030 + QEN71_RS21410 0.60 +0.3 4,747,030 + QEN71_RS21410 0.60 -0.1 4,747,031 - QEN71_RS21410 0.60 +0.5 4,747,031 - QEN71_RS21410 0.60 +0.2 4,747,031 - QEN71_RS21410 0.60 -0.6 4,747,031 - QEN71_RS21410 0.60 -0.7 4,747,111 + QEN71_RS21410 0.66 +1.3 4,747,111 + QEN71_RS21410 0.66 +1.2 4,747,112 - QEN71_RS21410 0.66 -0.2 4,747,114 + QEN71_RS21410 0.67 -1.4 4,747,114 + QEN71_RS21410 0.67 +0.6 4,747,115 - QEN71_RS21410 0.67 +1.6 4,747,120 + QEN71_RS21410 0.67 +0.3 4,747,120 + QEN71_RS21410 0.67 -0.1 4,747,132 + QEN71_RS21410 0.68 +0.5 4,747,132 + QEN71_RS21410 0.68 -0.4 4,747,132 + QEN71_RS21410 0.68 -0.8 4,747,132 + QEN71_RS21410 0.68 +0.1 4,747,133 - QEN71_RS21410 0.68 -2.2 4,747,133 - QEN71_RS21410 0.68 -0.6 4,747,361 + QEN71_RS21410 0.87 -0.2 4,747,362 - QEN71_RS21410 0.87 -0.4 4,747,388 - QEN71_RS21410 0.89 -1.1 4,747,388 - QEN71_RS21410 0.89 +0.2 4,747,388 - QEN71_RS21410 0.89 -1.1 4,747,555 + +0.2 4,747,555 + -0.6 4,747,556 - -1.2 4,747,556 - +1.2 4,747,556 - +0.3 4,747,556 - +0.4 4,747,568 - -0.5 4,747,612 + -0.7 4,747,613 - -1.1 4,747,613 - +1.0 4,747,613 - +0.8 4,747,613 - +0.2 4,747,646 + +2.5 4,747,862 + QEN71_RS21415 0.49 -1.1 4,747,873 + QEN71_RS21415 0.52 -0.1 4,747,873 + QEN71_RS21415 0.52 -0.0 4,747,874 - QEN71_RS21415 0.52 +0.5 4,747,893 - QEN71_RS21415 0.58 +0.3 4,747,893 - QEN71_RS21415 0.58 -0.7 4,747,917 - QEN71_RS21415 0.64 +1.0 4,747,917 - QEN71_RS21415 0.64 -1.2 4,747,917 - QEN71_RS21415 0.64 -0.5 4,747,917 - QEN71_RS21415 0.64 +1.3 4,747,964 - QEN71_RS21415 0.77 +0.1 4,747,992 - QEN71_RS21415 0.84 -0.1 4,748,053 + -0.5 4,748,053 + +0.8 4,748,053 + -0.1 4,748,054 - -0.9 4,748,092 - -0.5 4,748,153 - -0.5 4,748,153 - -0.7 4,748,164 - QEN71_RS21420 0.10 -0.7 4,748,392 + QEN71_RS21420 0.41 +0.2 4,748,392 + QEN71_RS21420 0.41 +1.2 4,748,393 - QEN71_RS21420 0.41 -0.2
Or see this region's nucleotide sequence