Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS04125 and QEN71_RS04130 are separated by 78 nucleotides QEN71_RS04130 and QEN71_RS04135 are separated by 317 nucleotides QEN71_RS04135 and QEN71_RS04140 are separated by 77 nucleotides
QEN71_RS04125: QEN71_RS04125 - ADP-glyceromanno-heptose 6-epimerase, at 913,391 to 914,383
_RS04125
QEN71_RS04130: QEN71_RS04130 - helix-hairpin-helix domain-containing protein, at 914,462 to 914,830
_RS04130
QEN71_RS04135: QEN71_RS04135 - cysteine synthase CysM, at 915,148 to 916,050
_RS04135
QEN71_RS04140: QEN71_RS04140 - lytic murein transglycosylase B, at 916,128 to 917,336
_RS04140
Position (kb) 915
916
917 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 914.367 kb on + strand at 914.381 kb on + strand at 914.381 kb on + strand at 914.382 kb on - strand at 914.392 kb on + strand at 914.392 kb on + strand at 914.392 kb on + strand at 914.392 kb on + strand at 914.392 kb on + strand at 914.392 kb on + strand at 914.392 kb on + strand at 914.393 kb on - strand at 914.393 kb on - strand at 914.393 kb on - strand at 914.393 kb on - strand at 914.402 kb on + strand at 914.459 kb on + strand at 914.459 kb on + strand at 914.459 kb on + strand at 914.459 kb on + strand at 914.459 kb on + strand at 914.459 kb on + strand at 914.459 kb on + strand at 914.460 kb on - strand at 914.460 kb on - strand at 914.460 kb on - strand at 914.460 kb on - strand at 914.460 kb on - strand at 914.460 kb on - strand at 914.460 kb on - strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.461 kb on + strand at 914.462 kb on + strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.462 kb on - strand at 914.677 kb on + strand, within QEN71_RS04130 at 914.678 kb on - strand, within QEN71_RS04130 at 914.678 kb on - strand, within QEN71_RS04130 at 914.678 kb on - strand, within QEN71_RS04130 at 914.678 kb on - strand, within QEN71_RS04130 at 914.829 kb on - strand at 914.829 kb on - strand at 914.875 kb on + strand at 914.876 kb on - strand at 915.093 kb on + strand at 915.094 kb on - strand at 915.094 kb on - strand at 915.098 kb on + strand at 915.098 kb on + strand at 915.099 kb on - strand at 916.049 kb on - strand at 916.110 kb on - strand at 916.130 kb on - strand at 916.130 kb on - strand at 916.130 kb on - strand at 916.207 kb on + strand at 916.208 kb on - strand at 916.208 kb on - strand at 916.208 kb on - strand at 916.208 kb on - strand at 916.222 kb on + strand at 916.222 kb on + strand at 916.222 kb on + strand at 916.223 kb on - strand at 916.223 kb on - strand at 916.223 kb on - strand at 916.223 kb on - strand at 916.239 kb on - strand at 916.239 kb on - strand at 916.240 kb on + strand at 916.240 kb on + strand at 916.240 kb on + strand at 916.241 kb on - strand at 916.241 kb on - strand at 916.241 kb on - strand at 916.255 kb on + strand, within QEN71_RS04140 at 916.277 kb on + strand, within QEN71_RS04140 at 916.277 kb on + strand, within QEN71_RS04140 at 916.277 kb on + strand, within QEN71_RS04140 at 916.277 kb on + strand, within QEN71_RS04140 at 916.277 kb on + strand, within QEN71_RS04140 at 916.277 kb on + strand, within QEN71_RS04140 at 916.277 kb on + strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.278 kb on - strand, within QEN71_RS04140 at 916.279 kb on + strand, within QEN71_RS04140 at 916.279 kb on + strand, within QEN71_RS04140 at 916.279 kb on + strand, within QEN71_RS04140 at 916.279 kb on + strand, within QEN71_RS04140 at 916.280 kb on - strand, within QEN71_RS04140 at 916.280 kb on - strand, within QEN71_RS04140 at 916.280 kb on - strand, within QEN71_RS04140 at 916.516 kb on + strand, within QEN71_RS04140 at 916.517 kb on - strand, within QEN71_RS04140 at 916.517 kb on - strand, within QEN71_RS04140 at 916.517 kb on - strand, within QEN71_RS04140 at 916.583 kb on - strand, within QEN71_RS04140 at 916.583 kb on - strand, within QEN71_RS04140 at 916.594 kb on + strand, within QEN71_RS04140 at 916.594 kb on + strand, within QEN71_RS04140 at 916.594 kb on + strand, within QEN71_RS04140 at 916.594 kb on + strand, within QEN71_RS04140 at 916.594 kb on + strand, within QEN71_RS04140 at 916.595 kb on - strand, within QEN71_RS04140 at 916.595 kb on - strand, within QEN71_RS04140 at 916.595 kb on - strand, within QEN71_RS04140 at 916.595 kb on - strand, within QEN71_RS04140 at 916.645 kb on + strand, within QEN71_RS04140 at 916.645 kb on + strand, within QEN71_RS04140 at 916.645 kb on + strand, within QEN71_RS04140 at 916.645 kb on + strand, within QEN71_RS04140 at 916.646 kb on - strand, within QEN71_RS04140 at 916.646 kb on - strand, within QEN71_RS04140 at 916.646 kb on - strand, within QEN71_RS04140 at 916.646 kb on - strand, within QEN71_RS04140 at 916.646 kb on - strand, within QEN71_RS04140 at 916.646 kb on - strand, within QEN71_RS04140 at 916.699 kb on + strand, within QEN71_RS04140 at 916.699 kb on + strand, within QEN71_RS04140 at 916.699 kb on + strand, within QEN71_RS04140 at 916.700 kb on - strand, within QEN71_RS04140 at 916.700 kb on - strand, within QEN71_RS04140 at 916.700 kb on - strand, within QEN71_RS04140 at 916.700 kb on - strand, within QEN71_RS04140 at 916.808 kb on + strand, within QEN71_RS04140 at 916.808 kb on + strand, within QEN71_RS04140 at 916.808 kb on + strand, within QEN71_RS04140 at 916.808 kb on + strand, within QEN71_RS04140 at 916.809 kb on - strand, within QEN71_RS04140 at 916.809 kb on - strand, within QEN71_RS04140 at 916.809 kb on - strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.810 kb on + strand, within QEN71_RS04140 at 916.811 kb on - strand, within QEN71_RS04140 at 916.811 kb on - strand, within QEN71_RS04140 at 916.811 kb on - strand, within QEN71_RS04140 at 916.811 kb on - strand, within QEN71_RS04140 at 916.811 kb on - strand, within QEN71_RS04140 at 916.811 kb on - strand, within QEN71_RS04140 at 916.811 kb on - strand, within QEN71_RS04140 at 916.811 kb on - strand, within QEN71_RS04140 at 916.819 kb on + strand, within QEN71_RS04140 at 916.819 kb on + strand, within QEN71_RS04140 at 916.819 kb on + strand, within QEN71_RS04140 at 916.819 kb on + strand, within QEN71_RS04140 at 916.819 kb on + strand, within QEN71_RS04140 at 916.819 kb on + strand, within QEN71_RS04140 at 916.819 kb on + strand, within QEN71_RS04140 at 916.820 kb on - strand, within QEN71_RS04140 at 916.820 kb on - strand, within QEN71_RS04140 at 916.820 kb on - strand, within QEN71_RS04140 at 916.820 kb on - strand, within QEN71_RS04140 at 916.820 kb on - strand, within QEN71_RS04140 at 916.870 kb on + strand, within QEN71_RS04140 at 916.870 kb on + strand, within QEN71_RS04140 at 916.870 kb on + strand, within QEN71_RS04140 at 916.870 kb on + strand, within QEN71_RS04140 at 916.870 kb on + strand, within QEN71_RS04140 at 916.870 kb on + strand, within QEN71_RS04140 at 916.870 kb on + strand, within QEN71_RS04140 at 916.871 kb on - strand, within QEN71_RS04140 at 916.871 kb on - strand, within QEN71_RS04140 at 916.871 kb on - strand, within QEN71_RS04140 at 916.871 kb on - strand, within QEN71_RS04140 at 916.871 kb on - strand, within QEN71_RS04140 at 916.871 kb on - strand, within QEN71_RS04140 at 916.871 kb on - strand, within QEN71_RS04140 at 916.880 kb on - strand, within QEN71_RS04140 at 916.963 kb on + strand, within QEN71_RS04140 at 916.964 kb on - strand, within QEN71_RS04140 at 916.964 kb on - strand, within QEN71_RS04140 at 916.964 kb on - strand, within QEN71_RS04140 at 917.030 kb on - strand, within QEN71_RS04140 at 917.030 kb on - strand, within QEN71_RS04140 at 917.046 kb on + strand, within QEN71_RS04140 at 917.047 kb on - strand, within QEN71_RS04140 at 917.047 kb on - strand, within QEN71_RS04140 at 917.047 kb on - strand, within QEN71_RS04140
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 914,367 + +0.9 914,381 + +0.4 914,381 + -1.0 914,382 - -1.3 914,392 + -0.1 914,392 + -1.6 914,392 + +0.0 914,392 + -0.1 914,392 + +0.4 914,392 + -0.2 914,392 + +1.5 914,393 - -0.5 914,393 - +0.6 914,393 - -0.9 914,393 - -1.8 914,402 + +1.4 914,459 + +0.1 914,459 + -0.5 914,459 + +1.7 914,459 + +0.3 914,459 + +1.6 914,459 + +0.2 914,459 + -1.2 914,460 - -0.1 914,460 - -1.2 914,460 - -0.1 914,460 - +0.2 914,460 - +0.4 914,460 - -0.3 914,460 - -0.8 914,461 + -0.0 914,461 + -0.6 914,461 + -1.9 914,461 + -0.7 914,461 + +0.2 914,461 + -0.5 914,461 + -0.2 914,461 + -0.6 914,461 + -0.0 914,461 + +1.6 914,461 + -0.8 914,461 + -1.3 914,461 + -0.8 914,461 + -0.5 914,461 + -0.7 914,461 + -0.2 914,461 + +1.2 914,461 + -0.5 914,461 + +1.0 914,461 + -0.2 914,461 + -0.4 914,461 + -0.9 914,461 + +0.3 914,461 + +0.7 914,461 + -0.2 914,461 + +1.4 914,461 + -0.0 914,461 + -0.9 914,462 + -1.1 914,462 - -0.7 914,462 - -2.6 914,462 - -0.5 914,462 - -0.6 914,462 - +0.6 914,462 - +0.4 914,462 - +1.3 914,462 - -0.2 914,462 - -0.1 914,462 - +0.3 914,462 - +0.2 914,462 - -0.6 914,462 - +1.4 914,462 - +0.1 914,462 - -0.6 914,462 - +0.6 914,462 - -0.0 914,462 - -0.9 914,462 - -0.1 914,462 - -1.2 914,462 - +0.7 914,677 + QEN71_RS04130 0.58 +0.3 914,678 - QEN71_RS04130 0.59 -0.4 914,678 - QEN71_RS04130 0.59 +0.6 914,678 - QEN71_RS04130 0.59 +0.5 914,678 - QEN71_RS04130 0.59 +0.0 914,829 - -0.6 914,829 - +0.4 914,875 + -0.2 914,876 - +0.0 915,093 + +0.4 915,094 - +1.0 915,094 - -0.7 915,098 + +0.3 915,098 + +0.7 915,099 - +1.1 916,049 - -0.1 916,110 - -1.1 916,130 - -1.9 916,130 - +0.3 916,130 - -1.8 916,207 + -1.0 916,208 - +0.4 916,208 - -0.4 916,208 - +0.4 916,208 - +0.0 916,222 + -0.4 916,222 + -0.2 916,222 + +2.0 916,223 - +0.2 916,223 - -1.5 916,223 - +0.0 916,223 - +0.2 916,239 - +0.2 916,239 - -0.5 916,240 + +0.9 916,240 + +0.5 916,240 + -0.9 916,241 - +0.1 916,241 - +0.2 916,241 - -1.3 916,255 + QEN71_RS04140 0.11 -0.7 916,277 + QEN71_RS04140 0.12 -0.3 916,277 + QEN71_RS04140 0.12 -3.1 916,277 + QEN71_RS04140 0.12 +0.3 916,277 + QEN71_RS04140 0.12 -0.8 916,277 + QEN71_RS04140 0.12 +0.9 916,277 + QEN71_RS04140 0.12 -0.0 916,277 + QEN71_RS04140 0.12 +1.0 916,278 - QEN71_RS04140 0.12 +0.4 916,278 - QEN71_RS04140 0.12 +0.0 916,278 - QEN71_RS04140 0.12 -0.1 916,278 - QEN71_RS04140 0.12 -0.6 916,278 - QEN71_RS04140 0.12 -0.0 916,278 - QEN71_RS04140 0.12 -0.2 916,278 - QEN71_RS04140 0.12 +1.7 916,278 - QEN71_RS04140 0.12 -1.5 916,278 - QEN71_RS04140 0.12 +0.5 916,278 - QEN71_RS04140 0.12 -2.3 916,278 - QEN71_RS04140 0.12 -0.6 916,278 - QEN71_RS04140 0.12 +0.5 916,278 - QEN71_RS04140 0.12 -0.4 916,279 + QEN71_RS04140 0.12 -0.5 916,279 + QEN71_RS04140 0.12 -0.3 916,279 + QEN71_RS04140 0.12 -0.6 916,279 + QEN71_RS04140 0.12 +0.2 916,280 - QEN71_RS04140 0.13 -0.1 916,280 - QEN71_RS04140 0.13 +1.1 916,280 - QEN71_RS04140 0.13 -0.1 916,516 + QEN71_RS04140 0.32 -1.1 916,517 - QEN71_RS04140 0.32 -1.2 916,517 - QEN71_RS04140 0.32 +0.2 916,517 - QEN71_RS04140 0.32 -0.9 916,583 - QEN71_RS04140 0.38 +0.1 916,583 - QEN71_RS04140 0.38 -0.6 916,594 + QEN71_RS04140 0.39 -0.6 916,594 + QEN71_RS04140 0.39 -0.2 916,594 + QEN71_RS04140 0.39 -0.2 916,594 + QEN71_RS04140 0.39 +0.4 916,594 + QEN71_RS04140 0.39 -0.4 916,595 - QEN71_RS04140 0.39 +0.0 916,595 - QEN71_RS04140 0.39 -0.8 916,595 - QEN71_RS04140 0.39 +2.3 916,595 - QEN71_RS04140 0.39 -1.0 916,645 + QEN71_RS04140 0.43 -0.1 916,645 + QEN71_RS04140 0.43 +1.1 916,645 + QEN71_RS04140 0.43 +0.4 916,645 + QEN71_RS04140 0.43 -0.7 916,646 - QEN71_RS04140 0.43 +0.1 916,646 - QEN71_RS04140 0.43 +1.3 916,646 - QEN71_RS04140 0.43 +0.6 916,646 - QEN71_RS04140 0.43 -1.9 916,646 - QEN71_RS04140 0.43 +0.2 916,646 - QEN71_RS04140 0.43 -0.1 916,699 + QEN71_RS04140 0.47 +0.1 916,699 + QEN71_RS04140 0.47 -0.3 916,699 + QEN71_RS04140 0.47 +0.3 916,700 - QEN71_RS04140 0.47 +0.4 916,700 - QEN71_RS04140 0.47 -0.1 916,700 - QEN71_RS04140 0.47 -0.0 916,700 - QEN71_RS04140 0.47 +0.8 916,808 + QEN71_RS04140 0.56 -0.3 916,808 + QEN71_RS04140 0.56 +0.7 916,808 + QEN71_RS04140 0.56 -0.6 916,808 + QEN71_RS04140 0.56 +0.8 916,809 - QEN71_RS04140 0.56 +0.7 916,809 - QEN71_RS04140 0.56 -0.7 916,809 - QEN71_RS04140 0.56 -1.0 916,810 + QEN71_RS04140 0.56 -0.5 916,810 + QEN71_RS04140 0.56 +2.0 916,810 + QEN71_RS04140 0.56 +3.0 916,810 + QEN71_RS04140 0.56 +0.8 916,810 + QEN71_RS04140 0.56 +0.8 916,810 + QEN71_RS04140 0.56 +1.0 916,810 + QEN71_RS04140 0.56 -0.4 916,810 + QEN71_RS04140 0.56 +0.7 916,810 + QEN71_RS04140 0.56 -0.8 916,810 + QEN71_RS04140 0.56 -0.4 916,810 + QEN71_RS04140 0.56 +0.9 916,810 + QEN71_RS04140 0.56 +0.3 916,810 + QEN71_RS04140 0.56 +0.4 916,810 + QEN71_RS04140 0.56 +0.6 916,811 - QEN71_RS04140 0.56 -0.6 916,811 - QEN71_RS04140 0.56 -1.0 916,811 - QEN71_RS04140 0.56 -1.3 916,811 - QEN71_RS04140 0.56 +0.3 916,811 - QEN71_RS04140 0.56 +0.1 916,811 - QEN71_RS04140 0.56 -0.9 916,811 - QEN71_RS04140 0.56 -0.2 916,811 - QEN71_RS04140 0.56 +0.4 916,819 + QEN71_RS04140 0.57 -0.6 916,819 + QEN71_RS04140 0.57 -0.6 916,819 + QEN71_RS04140 0.57 +0.5 916,819 + QEN71_RS04140 0.57 -0.2 916,819 + QEN71_RS04140 0.57 -0.4 916,819 + QEN71_RS04140 0.57 -0.0 916,819 + QEN71_RS04140 0.57 -1.7 916,820 - QEN71_RS04140 0.57 -0.9 916,820 - QEN71_RS04140 0.57 -1.3 916,820 - QEN71_RS04140 0.57 +0.3 916,820 - QEN71_RS04140 0.57 -0.8 916,820 - QEN71_RS04140 0.57 +2.0 916,870 + QEN71_RS04140 0.61 +0.4 916,870 + QEN71_RS04140 0.61 -2.2 916,870 + QEN71_RS04140 0.61 -0.2 916,870 + QEN71_RS04140 0.61 -0.2 916,870 + QEN71_RS04140 0.61 +0.1 916,870 + QEN71_RS04140 0.61 +0.0 916,870 + QEN71_RS04140 0.61 +0.6 916,871 - QEN71_RS04140 0.61 +0.2 916,871 - QEN71_RS04140 0.61 -0.0 916,871 - QEN71_RS04140 0.61 +0.2 916,871 - QEN71_RS04140 0.61 +1.0 916,871 - QEN71_RS04140 0.61 +0.0 916,871 - QEN71_RS04140 0.61 -0.9 916,871 - QEN71_RS04140 0.61 +0.6 916,880 - QEN71_RS04140 0.62 -0.2 916,963 + QEN71_RS04140 0.69 -0.0 916,964 - QEN71_RS04140 0.69 +1.5 916,964 - QEN71_RS04140 0.69 -0.7 916,964 - QEN71_RS04140 0.69 -0.1 917,030 - QEN71_RS04140 0.75 +0.3 917,030 - QEN71_RS04140 0.75 -0.2 917,046 + QEN71_RS04140 0.76 -0.1 917,047 - QEN71_RS04140 0.76 +0.0 917,047 - QEN71_RS04140 0.76 -0.4 917,047 - QEN71_RS04140 0.76 +0.4
Or see this region's nucleotide sequence