Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS02380 and QEN71_RS02385 overlap by 4 nucleotides QEN71_RS02385 and QEN71_RS02390 overlap by 8 nucleotides QEN71_RS02390 and QEN71_RS02395 are separated by 77 nucleotides QEN71_RS02395 and QEN71_RS02400 are separated by 175 nucleotides
QEN71_RS02380: QEN71_RS02380 - M48 family metalloprotease, at 533,050 to 534,738
_RS02380
QEN71_RS02385: QEN71_RS02385 - DUF2946 family protein, at 534,735 to 535,337
_RS02385
QEN71_RS02390: QEN71_RS02390 - hydrolase, at 535,330 to 536,418
_RS02390
QEN71_RS02395: QEN71_RS02395 - nuclear transport factor 2 family protein, at 536,496 to 536,942
_RS02395
QEN71_RS02400: QEN71_RS02400 - lipopolysaccharide heptosyltransferase II, at 537,118 to 538,143
_RS02400
Position (kb) 535
536
537 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 534.511 kb on + strand, within QEN71_RS02380 at 534.511 kb on + strand, within QEN71_RS02380 at 534.512 kb on - strand, within QEN71_RS02380 at 534.649 kb on + strand at 534.649 kb on + strand at 534.650 kb on - strand at 534.652 kb on + strand at 534.652 kb on + strand at 534.652 kb on + strand at 534.652 kb on + strand at 534.652 kb on + strand at 534.652 kb on + strand at 534.653 kb on - strand at 534.653 kb on - strand at 534.653 kb on - strand at 534.653 kb on - strand at 534.653 kb on - strand at 534.653 kb on - strand at 534.701 kb on - strand at 534.701 kb on - strand at 534.701 kb on - strand at 534.736 kb on + strand at 534.736 kb on + strand at 534.737 kb on - strand at 534.737 kb on - strand at 534.737 kb on - strand at 534.737 kb on - strand at 534.737 kb on - strand at 534.737 kb on - strand at 534.737 kb on - strand at 534.737 kb on - strand at 534.737 kb on - strand at 534.822 kb on + strand, within QEN71_RS02385 at 534.995 kb on - strand, within QEN71_RS02385 at 534.995 kb on - strand, within QEN71_RS02385 at 534.995 kb on - strand, within QEN71_RS02385 at 534.995 kb on - strand, within QEN71_RS02385 at 535.091 kb on - strand, within QEN71_RS02385 at 535.105 kb on + strand, within QEN71_RS02385 at 535.105 kb on + strand, within QEN71_RS02385 at 535.105 kb on + strand, within QEN71_RS02385 at 535.106 kb on - strand, within QEN71_RS02385 at 535.106 kb on - strand, within QEN71_RS02385 at 535.106 kb on - strand, within QEN71_RS02385 at 535.106 kb on - strand, within QEN71_RS02385 at 535.159 kb on + strand, within QEN71_RS02385 at 535.159 kb on + strand, within QEN71_RS02385 at 535.159 kb on + strand, within QEN71_RS02385 at 535.159 kb on + strand, within QEN71_RS02385 at 535.159 kb on + strand, within QEN71_RS02385 at 535.159 kb on + strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.160 kb on - strand, within QEN71_RS02385 at 535.191 kb on - strand, within QEN71_RS02385 at 535.191 kb on - strand, within QEN71_RS02385 at 535.358 kb on + strand at 535.465 kb on + strand, within QEN71_RS02390 at 535.465 kb on + strand, within QEN71_RS02390 at 535.465 kb on + strand, within QEN71_RS02390 at 535.465 kb on + strand, within QEN71_RS02390 at 535.465 kb on + strand, within QEN71_RS02390 at 535.465 kb on + strand, within QEN71_RS02390 at 535.466 kb on - strand, within QEN71_RS02390 at 535.466 kb on - strand, within QEN71_RS02390 at 535.466 kb on - strand, within QEN71_RS02390 at 535.466 kb on - strand, within QEN71_RS02390 at 535.466 kb on - strand, within QEN71_RS02390 at 535.466 kb on - strand, within QEN71_RS02390 at 535.466 kb on - strand, within QEN71_RS02390 at 535.466 kb on - strand, within QEN71_RS02390 at 535.583 kb on + strand, within QEN71_RS02390 at 535.583 kb on + strand, within QEN71_RS02390 at 535.584 kb on - strand, within QEN71_RS02390 at 535.688 kb on + strand, within QEN71_RS02390 at 535.689 kb on - strand, within QEN71_RS02390 at 535.689 kb on - strand, within QEN71_RS02390 at 535.745 kb on + strand, within QEN71_RS02390 at 535.745 kb on + strand, within QEN71_RS02390 at 535.745 kb on + strand, within QEN71_RS02390 at 535.745 kb on + strand, within QEN71_RS02390 at 535.745 kb on + strand, within QEN71_RS02390 at 535.745 kb on + strand, within QEN71_RS02390 at 535.746 kb on - strand, within QEN71_RS02390 at 535.746 kb on - strand, within QEN71_RS02390 at 535.746 kb on - strand, within QEN71_RS02390 at 535.746 kb on - strand, within QEN71_RS02390 at 535.888 kb on + strand, within QEN71_RS02390 at 535.915 kb on - strand, within QEN71_RS02390 at 535.915 kb on - strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.973 kb on + strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 535.974 kb on - strand, within QEN71_RS02390 at 536.048 kb on + strand, within QEN71_RS02390 at 536.048 kb on + strand, within QEN71_RS02390 at 536.048 kb on + strand, within QEN71_RS02390 at 536.049 kb on - strand, within QEN71_RS02390 at 536.076 kb on - strand, within QEN71_RS02390 at 536.076 kb on - strand, within QEN71_RS02390 at 536.076 kb on - strand, within QEN71_RS02390 at 536.304 kb on - strand, within QEN71_RS02390 at 536.431 kb on - strand at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.617 kb on + strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.618 kb on - strand, within QEN71_RS02395 at 536.683 kb on + strand, within QEN71_RS02395 at 536.684 kb on - strand, within QEN71_RS02395 at 536.707 kb on + strand, within QEN71_RS02395 at 536.707 kb on + strand, within QEN71_RS02395 at 536.707 kb on + strand, within QEN71_RS02395 at 536.708 kb on - strand, within QEN71_RS02395 at 536.708 kb on - strand, within QEN71_RS02395 at 536.708 kb on - strand, within QEN71_RS02395 at 536.887 kb on + strand, within QEN71_RS02395 at 536.887 kb on + strand, within QEN71_RS02395 at 536.887 kb on + strand, within QEN71_RS02395 at 536.887 kb on + strand, within QEN71_RS02395 at 536.887 kb on + strand, within QEN71_RS02395 at 536.887 kb on + strand, within QEN71_RS02395 at 536.887 kb on + strand, within QEN71_RS02395 at 536.887 kb on + strand, within QEN71_RS02395 at 536.887 kb on + strand, within QEN71_RS02395 at 536.888 kb on - strand, within QEN71_RS02395 at 536.888 kb on - strand, within QEN71_RS02395 at 536.888 kb on - strand, within QEN71_RS02395 at 536.888 kb on - strand, within QEN71_RS02395 at 536.890 kb on + strand, within QEN71_RS02395 at 536.890 kb on + strand, within QEN71_RS02395 at 536.890 kb on + strand, within QEN71_RS02395 at 536.890 kb on + strand, within QEN71_RS02395 at 536.992 kb on + strand at 536.993 kb on - strand at 536.993 kb on - strand at 536.993 kb on - strand at 536.993 kb on - strand at 536.993 kb on - strand at 536.993 kb on - strand at 536.993 kb on - strand at 537.157 kb on + strand at 537.158 kb on - strand at 537.158 kb on - strand at 537.158 kb on - strand at 537.158 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 534,511 + QEN71_RS02380 0.87 -0.1 534,511 + QEN71_RS02380 0.87 -0.5 534,512 - QEN71_RS02380 0.87 +0.5 534,649 + +0.3 534,649 + -0.6 534,650 - -1.2 534,652 + -0.5 534,652 + +0.1 534,652 + -0.7 534,652 + +0.0 534,652 + +0.4 534,652 + -0.4 534,653 - +0.2 534,653 - +0.3 534,653 - +0.5 534,653 - +0.9 534,653 - -0.7 534,653 - -0.3 534,701 - +0.2 534,701 - +0.1 534,701 - +0.3 534,736 + +1.3 534,736 + +0.4 534,737 - -1.3 534,737 - -0.9 534,737 - +0.8 534,737 - -0.5 534,737 - -0.3 534,737 - -0.8 534,737 - +0.2 534,737 - -1.5 534,737 - -0.5 534,822 + QEN71_RS02385 0.14 +0.1 534,995 - QEN71_RS02385 0.43 +0.0 534,995 - QEN71_RS02385 0.43 -0.3 534,995 - QEN71_RS02385 0.43 +0.4 534,995 - QEN71_RS02385 0.43 -0.7 535,091 - QEN71_RS02385 0.59 -0.4 535,105 + QEN71_RS02385 0.61 +0.0 535,105 + QEN71_RS02385 0.61 +0.4 535,105 + QEN71_RS02385 0.61 +0.3 535,106 - QEN71_RS02385 0.62 +0.6 535,106 - QEN71_RS02385 0.62 -2.3 535,106 - QEN71_RS02385 0.62 -0.6 535,106 - QEN71_RS02385 0.62 -1.3 535,159 + QEN71_RS02385 0.70 -0.2 535,159 + QEN71_RS02385 0.70 -0.2 535,159 + QEN71_RS02385 0.70 +0.5 535,159 + QEN71_RS02385 0.70 +0.2 535,159 + QEN71_RS02385 0.70 +1.3 535,159 + QEN71_RS02385 0.70 -1.5 535,160 - QEN71_RS02385 0.70 -0.8 535,160 - QEN71_RS02385 0.70 +0.7 535,160 - QEN71_RS02385 0.70 +0.4 535,160 - QEN71_RS02385 0.70 +1.3 535,160 - QEN71_RS02385 0.70 -0.5 535,160 - QEN71_RS02385 0.70 +0.5 535,160 - QEN71_RS02385 0.70 -0.8 535,160 - QEN71_RS02385 0.70 -0.3 535,160 - QEN71_RS02385 0.70 +0.3 535,160 - QEN71_RS02385 0.70 +1.0 535,191 - QEN71_RS02385 0.76 -0.2 535,191 - QEN71_RS02385 0.76 -0.2 535,358 + -1.3 535,465 + QEN71_RS02390 0.12 -1.2 535,465 + QEN71_RS02390 0.12 -1.0 535,465 + QEN71_RS02390 0.12 +0.2 535,465 + QEN71_RS02390 0.12 -0.1 535,465 + QEN71_RS02390 0.12 +0.0 535,465 + QEN71_RS02390 0.12 +0.0 535,466 - QEN71_RS02390 0.12 -0.2 535,466 - QEN71_RS02390 0.12 +0.0 535,466 - QEN71_RS02390 0.12 -0.5 535,466 - QEN71_RS02390 0.12 -0.8 535,466 - QEN71_RS02390 0.12 +0.3 535,466 - QEN71_RS02390 0.12 -0.6 535,466 - QEN71_RS02390 0.12 +0.2 535,466 - QEN71_RS02390 0.12 -1.9 535,583 + QEN71_RS02390 0.23 +0.3 535,583 + QEN71_RS02390 0.23 -0.3 535,584 - QEN71_RS02390 0.23 +0.7 535,688 + QEN71_RS02390 0.33 +1.5 535,689 - QEN71_RS02390 0.33 +0.2 535,689 - QEN71_RS02390 0.33 +2.6 535,745 + QEN71_RS02390 0.38 -0.7 535,745 + QEN71_RS02390 0.38 +0.1 535,745 + QEN71_RS02390 0.38 +0.2 535,745 + QEN71_RS02390 0.38 +0.5 535,745 + QEN71_RS02390 0.38 -0.2 535,745 + QEN71_RS02390 0.38 +0.0 535,746 - QEN71_RS02390 0.38 +0.0 535,746 - QEN71_RS02390 0.38 -0.8 535,746 - QEN71_RS02390 0.38 -0.4 535,746 - QEN71_RS02390 0.38 +0.2 535,888 + QEN71_RS02390 0.51 -0.8 535,915 - QEN71_RS02390 0.54 +0.8 535,915 - QEN71_RS02390 0.54 -0.6 535,973 + QEN71_RS02390 0.59 -0.3 535,973 + QEN71_RS02390 0.59 -0.4 535,973 + QEN71_RS02390 0.59 -0.0 535,973 + QEN71_RS02390 0.59 +0.2 535,973 + QEN71_RS02390 0.59 -0.9 535,973 + QEN71_RS02390 0.59 -2.5 535,973 + QEN71_RS02390 0.59 +0.5 535,973 + QEN71_RS02390 0.59 -1.4 535,973 + QEN71_RS02390 0.59 -0.2 535,973 + QEN71_RS02390 0.59 +0.1 535,973 + QEN71_RS02390 0.59 -0.3 535,973 + QEN71_RS02390 0.59 +0.3 535,973 + QEN71_RS02390 0.59 -0.3 535,973 + QEN71_RS02390 0.59 -1.9 535,973 + QEN71_RS02390 0.59 -1.4 535,974 - QEN71_RS02390 0.59 +0.4 535,974 - QEN71_RS02390 0.59 +0.0 535,974 - QEN71_RS02390 0.59 -0.3 535,974 - QEN71_RS02390 0.59 +0.1 535,974 - QEN71_RS02390 0.59 -0.9 535,974 - QEN71_RS02390 0.59 -1.3 535,974 - QEN71_RS02390 0.59 -1.0 535,974 - QEN71_RS02390 0.59 -1.4 535,974 - QEN71_RS02390 0.59 +2.3 535,974 - QEN71_RS02390 0.59 -0.2 535,974 - QEN71_RS02390 0.59 +0.8 535,974 - QEN71_RS02390 0.59 -1.4 535,974 - QEN71_RS02390 0.59 +0.2 536,048 + QEN71_RS02390 0.66 -0.1 536,048 + QEN71_RS02390 0.66 -0.8 536,048 + QEN71_RS02390 0.66 -0.5 536,049 - QEN71_RS02390 0.66 +0.5 536,076 - QEN71_RS02390 0.69 -0.1 536,076 - QEN71_RS02390 0.69 -1.1 536,076 - QEN71_RS02390 0.69 +2.0 536,304 - QEN71_RS02390 0.89 +0.7 536,431 - -0.5 536,617 + QEN71_RS02395 0.27 +1.6 536,617 + QEN71_RS02395 0.27 +0.0 536,617 + QEN71_RS02395 0.27 +0.0 536,617 + QEN71_RS02395 0.27 +0.6 536,617 + QEN71_RS02395 0.27 +1.0 536,617 + QEN71_RS02395 0.27 +1.0 536,617 + QEN71_RS02395 0.27 +0.2 536,617 + QEN71_RS02395 0.27 +0.5 536,617 + QEN71_RS02395 0.27 -0.8 536,617 + QEN71_RS02395 0.27 -0.3 536,617 + QEN71_RS02395 0.27 -1.9 536,617 + QEN71_RS02395 0.27 -1.0 536,617 + QEN71_RS02395 0.27 -0.3 536,617 + QEN71_RS02395 0.27 -1.5 536,617 + QEN71_RS02395 0.27 -0.5 536,617 + QEN71_RS02395 0.27 -0.1 536,617 + QEN71_RS02395 0.27 +1.5 536,617 + QEN71_RS02395 0.27 +0.0 536,618 - QEN71_RS02395 0.27 -2.2 536,618 - QEN71_RS02395 0.27 +1.8 536,618 - QEN71_RS02395 0.27 -1.9 536,618 - QEN71_RS02395 0.27 -0.3 536,618 - QEN71_RS02395 0.27 +0.0 536,618 - QEN71_RS02395 0.27 +0.3 536,618 - QEN71_RS02395 0.27 -0.1 536,618 - QEN71_RS02395 0.27 -0.0 536,618 - QEN71_RS02395 0.27 -1.6 536,618 - QEN71_RS02395 0.27 -1.5 536,618 - QEN71_RS02395 0.27 -0.8 536,618 - QEN71_RS02395 0.27 -0.2 536,618 - QEN71_RS02395 0.27 -0.3 536,618 - QEN71_RS02395 0.27 -2.4 536,618 - QEN71_RS02395 0.27 -0.9 536,683 + QEN71_RS02395 0.42 -0.2 536,684 - QEN71_RS02395 0.42 -1.4 536,707 + QEN71_RS02395 0.47 +0.0 536,707 + QEN71_RS02395 0.47 -0.0 536,707 + QEN71_RS02395 0.47 -0.3 536,708 - QEN71_RS02395 0.47 -0.4 536,708 - QEN71_RS02395 0.47 -0.5 536,708 - QEN71_RS02395 0.47 +1.2 536,887 + QEN71_RS02395 0.87 -0.8 536,887 + QEN71_RS02395 0.87 -0.3 536,887 + QEN71_RS02395 0.87 +0.0 536,887 + QEN71_RS02395 0.87 -0.4 536,887 + QEN71_RS02395 0.87 -0.5 536,887 + QEN71_RS02395 0.87 -0.8 536,887 + QEN71_RS02395 0.87 -0.5 536,887 + QEN71_RS02395 0.87 +0.6 536,887 + QEN71_RS02395 0.87 -1.0 536,888 - QEN71_RS02395 0.88 +0.0 536,888 - QEN71_RS02395 0.88 -0.4 536,888 - QEN71_RS02395 0.88 +0.4 536,888 - QEN71_RS02395 0.88 -0.3 536,890 + QEN71_RS02395 0.88 -2.1 536,890 + QEN71_RS02395 0.88 +0.2 536,890 + QEN71_RS02395 0.88 -1.0 536,890 + QEN71_RS02395 0.88 -1.0 536,992 + +2.0 536,993 - -0.2 536,993 - +0.8 536,993 - -0.0 536,993 - -2.1 536,993 - -2.9 536,993 - +0.5 536,993 - -0.4 537,157 + -1.0 537,158 - -2.0 537,158 - -2.5 537,158 - -2.4 537,158 - -1.1
Or see this region's nucleotide sequence