Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS44135 and QEN71_RS44140 are separated by 684 nucleotides
QEN71_RS44135: QEN71_RS44135 - ParB/RepB/Spo0J family partition protein, at 303,597 to 304,586
_RS44135
QEN71_RS44140: QEN71_RS44140 - hypothetical protein, at 305,271 to 306,143
_RS44140
Position (kb) 305
306
307 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 304.584 kb on + strand at 304.584 kb on + strand at 304.585 kb on - strand at 304.585 kb on - strand at 304.622 kb on + strand at 304.622 kb on + strand at 304.628 kb on + strand at 304.628 kb on + strand at 304.628 kb on + strand at 304.629 kb on - strand at 304.629 kb on - strand at 304.629 kb on - strand at 304.629 kb on - strand at 304.741 kb on + strand at 304.741 kb on + strand at 304.741 kb on + strand at 304.742 kb on - strand at 304.742 kb on - strand at 304.742 kb on - strand at 304.742 kb on - strand at 304.742 kb on - strand at 304.742 kb on - strand at 304.742 kb on - strand at 304.744 kb on + strand at 304.744 kb on + strand at 304.744 kb on + strand at 304.745 kb on - strand at 304.760 kb on + strand at 304.761 kb on - strand at 304.761 kb on - strand at 304.783 kb on + strand at 304.830 kb on + strand at 304.830 kb on + strand at 304.831 kb on - strand at 304.831 kb on - strand at 304.831 kb on - strand at 304.832 kb on + strand at 304.832 kb on + strand at 304.832 kb on + strand at 304.832 kb on + strand at 304.833 kb on - strand at 304.833 kb on - strand at 304.833 kb on - strand at 304.833 kb on - strand at 304.833 kb on - strand at 304.846 kb on + strand at 304.849 kb on + strand at 304.883 kb on - strand at 304.982 kb on + strand at 304.982 kb on + strand at 304.982 kb on + strand at 304.982 kb on + strand at 304.982 kb on + strand at 305.019 kb on + strand at 305.128 kb on + strand at 305.128 kb on + strand at 305.128 kb on + strand at 305.128 kb on + strand at 305.128 kb on + strand at 305.129 kb on - strand at 305.129 kb on - strand at 305.190 kb on - strand at 305.192 kb on + strand at 305.192 kb on + strand at 305.192 kb on + strand at 305.192 kb on + strand at 305.192 kb on + strand at 305.192 kb on + strand at 305.192 kb on + strand at 305.192 kb on + strand at 305.192 kb on + strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.193 kb on - strand at 305.196 kb on + strand at 305.196 kb on + strand at 305.196 kb on + strand at 305.196 kb on + strand at 305.196 kb on + strand at 305.196 kb on + strand at 305.196 kb on + strand at 305.196 kb on + strand at 305.196 kb on + strand at 305.197 kb on - strand at 305.197 kb on - strand at 305.197 kb on - strand at 305.197 kb on - strand at 305.234 kb on + strand at 305.234 kb on + strand at 305.235 kb on - strand at 305.235 kb on - strand at 305.238 kb on + strand at 305.238 kb on + strand at 305.238 kb on + strand at 305.238 kb on + strand at 305.279 kb on + strand at 305.279 kb on + strand at 305.301 kb on + strand at 305.302 kb on - strand at 305.302 kb on - strand at 305.309 kb on + strand at 305.309 kb on + strand at 305.310 kb on - strand at 305.324 kb on + strand at 305.324 kb on + strand at 305.324 kb on + strand at 305.324 kb on + strand at 305.324 kb on + strand at 305.325 kb on - strand at 305.325 kb on - strand at 305.325 kb on - strand at 305.325 kb on - strand at 305.325 kb on - strand at 305.325 kb on - strand at 305.325 kb on - strand at 305.325 kb on - strand at 305.325 kb on - strand at 305.325 kb on - strand at 305.330 kb on + strand at 305.330 kb on + strand at 305.331 kb on - strand at 305.364 kb on + strand, within QEN71_RS44140 at 305.364 kb on + strand, within QEN71_RS44140 at 305.365 kb on - strand, within QEN71_RS44140 at 305.397 kb on + strand, within QEN71_RS44140 at 305.397 kb on + strand, within QEN71_RS44140 at 305.397 kb on + strand, within QEN71_RS44140 at 305.397 kb on + strand, within QEN71_RS44140 at 305.398 kb on - strand, within QEN71_RS44140 at 305.438 kb on - strand, within QEN71_RS44140 at 305.438 kb on - strand, within QEN71_RS44140 at 305.438 kb on - strand, within QEN71_RS44140 at 305.438 kb on - strand, within QEN71_RS44140 at 305.438 kb on - strand, within QEN71_RS44140 at 305.444 kb on - strand, within QEN71_RS44140 at 305.444 kb on - strand, within QEN71_RS44140 at 305.444 kb on - strand, within QEN71_RS44140 at 305.444 kb on - strand, within QEN71_RS44140 at 305.506 kb on + strand, within QEN71_RS44140 at 305.506 kb on + strand, within QEN71_RS44140 at 305.507 kb on - strand, within QEN71_RS44140 at 305.507 kb on - strand, within QEN71_RS44140 at 305.510 kb on + strand, within QEN71_RS44140 at 305.510 kb on + strand, within QEN71_RS44140 at 305.511 kb on - strand, within QEN71_RS44140 at 305.654 kb on + strand, within QEN71_RS44140 at 305.654 kb on + strand, within QEN71_RS44140 at 305.685 kb on + strand, within QEN71_RS44140 at 305.685 kb on + strand, within QEN71_RS44140 at 305.686 kb on - strand, within QEN71_RS44140 at 305.686 kb on - strand, within QEN71_RS44140 at 305.686 kb on - strand, within QEN71_RS44140 at 305.686 kb on - strand, within QEN71_RS44140 at 305.715 kb on + strand, within QEN71_RS44140 at 305.715 kb on + strand, within QEN71_RS44140 at 305.715 kb on + strand, within QEN71_RS44140 at 305.715 kb on + strand, within QEN71_RS44140 at 305.715 kb on + strand, within QEN71_RS44140 at 305.715 kb on + strand, within QEN71_RS44140 at 305.715 kb on + strand, within QEN71_RS44140 at 305.716 kb on - strand, within QEN71_RS44140 at 305.716 kb on - strand, within QEN71_RS44140 at 305.716 kb on - strand, within QEN71_RS44140 at 305.716 kb on - strand, within QEN71_RS44140 at 305.716 kb on - strand, within QEN71_RS44140 at 305.717 kb on + strand, within QEN71_RS44140 at 305.717 kb on + strand, within QEN71_RS44140 at 305.717 kb on + strand, within QEN71_RS44140 at 305.717 kb on + strand, within QEN71_RS44140 at 305.717 kb on + strand, within QEN71_RS44140 at 305.717 kb on + strand, within QEN71_RS44140 at 305.717 kb on + strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.718 kb on - strand, within QEN71_RS44140 at 305.750 kb on + strand, within QEN71_RS44140 at 305.750 kb on + strand, within QEN71_RS44140 at 305.750 kb on + strand, within QEN71_RS44140 at 305.751 kb on - strand, within QEN71_RS44140 at 305.751 kb on - strand, within QEN71_RS44140 at 305.944 kb on + strand, within QEN71_RS44140 at 305.944 kb on + strand, within QEN71_RS44140 at 305.944 kb on + strand, within QEN71_RS44140 at 305.945 kb on - strand, within QEN71_RS44140 at 305.945 kb on - strand, within QEN71_RS44140 at 305.945 kb on - strand, within QEN71_RS44140 at 306.052 kb on - strand, within QEN71_RS44140 at 306.052 kb on - strand, within QEN71_RS44140 at 306.052 kb on - strand, within QEN71_RS44140 at 306.052 kb on - strand, within QEN71_RS44140 at 306.058 kb on + strand at 306.059 kb on - strand at 306.059 kb on - strand at 306.137 kb on + strand at 306.138 kb on - strand at 306.138 kb on - strand at 306.138 kb on - strand at 306.138 kb on - strand at 306.138 kb on - strand at 306.141 kb on + strand at 306.141 kb on + strand at 306.141 kb on + strand at 306.142 kb on - strand at 306.142 kb on - strand at 306.142 kb on - strand at 306.142 kb on - strand at 306.142 kb on - strand at 306.147 kb on + strand at 306.147 kb on + strand at 306.147 kb on + strand at 306.147 kb on + strand at 306.147 kb on + strand at 306.147 kb on + strand at 306.147 kb on + strand at 306.147 kb on + strand at 306.148 kb on - strand at 306.148 kb on - strand at 306.148 kb on - strand at 306.148 kb on - strand at 306.148 kb on - strand at 306.148 kb on - strand at 306.148 kb on - strand at 306.151 kb on + strand at 306.151 kb on + strand at 306.151 kb on + strand at 306.151 kb on + strand at 306.152 kb on - strand at 306.240 kb on + strand at 306.240 kb on + strand at 306.240 kb on + strand at 306.240 kb on + strand at 306.241 kb on - strand at 306.241 kb on - strand at 306.241 kb on - strand at 306.241 kb on - strand at 306.307 kb on + strand at 306.308 kb on - strand at 306.342 kb on + strand at 306.342 kb on + strand at 306.342 kb on + strand at 306.342 kb on + strand at 306.342 kb on + strand at 306.342 kb on + strand at 306.342 kb on + strand at 306.343 kb on - strand at 306.343 kb on - strand at 306.343 kb on - strand at 306.566 kb on + strand at 306.566 kb on + strand at 306.566 kb on + strand at 306.567 kb on - strand at 306.567 kb on - strand at 306.604 kb on + strand at 306.604 kb on + strand at 306.604 kb on + strand at 306.604 kb on + strand at 306.604 kb on + strand at 306.605 kb on - strand at 306.605 kb on - strand at 306.605 kb on - strand at 306.605 kb on - strand at 306.605 kb on - strand at 306.605 kb on - strand at 306.605 kb on - strand at 306.605 kb on - strand at 306.605 kb on - strand at 306.605 kb on - strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.607 kb on + strand at 306.608 kb on - strand at 306.608 kb on - strand at 306.608 kb on - strand at 306.608 kb on - strand at 306.608 kb on - strand at 306.830 kb on - strand at 306.830 kb on - strand at 306.865 kb on + strand at 306.865 kb on + strand at 306.865 kb on + strand at 306.865 kb on + strand at 306.865 kb on + strand at 306.866 kb on - strand at 306.866 kb on - strand at 306.866 kb on - strand at 306.866 kb on - strand at 306.866 kb on - strand at 306.877 kb on - strand at 306.877 kb on - strand at 306.877 kb on - strand at 306.877 kb on - strand at 306.989 kb on + strand at 306.990 kb on - strand at 306.990 kb on - strand at 306.990 kb on - strand at 306.990 kb on - strand at 306.990 kb on - strand at 306.996 kb on - strand at 307.043 kb on + strand at 307.043 kb on + strand at 307.043 kb on + strand at 307.043 kb on + strand at 307.044 kb on - strand at 307.044 kb on - strand at 307.044 kb on - strand at 307.044 kb on - strand at 307.044 kb on - strand at 307.044 kb on - strand at 307.108 kb on + strand at 307.108 kb on + strand at 307.109 kb on - strand at 307.109 kb on - strand at 307.109 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 304,584 + -0.1 304,584 + -0.6 304,585 - -0.1 304,585 - -0.9 304,622 + -0.9 304,622 + -1.7 304,628 + -0.4 304,628 + +0.5 304,628 + +0.1 304,629 - -0.2 304,629 - +0.8 304,629 - -0.9 304,629 - -0.1 304,741 + -0.2 304,741 + +0.3 304,741 + -1.6 304,742 - +0.7 304,742 - +0.1 304,742 - -0.5 304,742 - +0.7 304,742 - -0.0 304,742 - +0.2 304,742 - -0.8 304,744 + +0.1 304,744 + -0.8 304,744 + -0.3 304,745 - +0.2 304,760 + -0.0 304,761 - +0.3 304,761 - -0.1 304,783 + -0.1 304,830 + +0.5 304,830 + -1.4 304,831 - -1.7 304,831 - -1.3 304,831 - -0.5 304,832 + -0.7 304,832 + -0.5 304,832 + +0.2 304,832 + +1.3 304,833 - +0.6 304,833 - -0.1 304,833 - -0.1 304,833 - +0.3 304,833 - -0.5 304,846 + -0.0 304,849 + +0.3 304,883 - -0.0 304,982 + -0.3 304,982 + +0.3 304,982 + -0.6 304,982 + -0.4 304,982 + -0.4 305,019 + -0.7 305,128 + -0.3 305,128 + -2.1 305,128 + -1.1 305,128 + -0.1 305,128 + -1.5 305,129 - -0.9 305,129 - -0.7 305,190 - -0.4 305,192 + +0.4 305,192 + +0.9 305,192 + +2.2 305,192 + -1.5 305,192 + +2.6 305,192 + +0.0 305,192 + -1.3 305,192 + +0.3 305,192 + +0.7 305,193 - -0.7 305,193 - -0.6 305,193 - +2.1 305,193 - -1.0 305,193 - +2.6 305,193 - -0.6 305,193 - +0.1 305,193 - -1.4 305,193 - +0.1 305,193 - -1.9 305,193 - -0.3 305,196 + +1.1 305,196 + -0.7 305,196 + +0.3 305,196 + +0.7 305,196 + +0.7 305,196 + -0.0 305,196 + -0.3 305,196 + +0.7 305,196 + -0.3 305,197 - -1.1 305,197 - +2.6 305,197 - -0.5 305,197 - +0.1 305,234 + +1.4 305,234 + +0.6 305,235 - -0.7 305,235 - -0.6 305,238 + +0.1 305,238 + +0.3 305,238 + -0.5 305,238 + +0.1 305,279 + +0.4 305,279 + -0.2 305,301 + -0.5 305,302 - -0.9 305,302 - -0.8 305,309 + -0.4 305,309 + +1.2 305,310 - -1.3 305,324 + +0.4 305,324 + -1.1 305,324 + -1.1 305,324 + -0.9 305,324 + -0.5 305,325 - -1.0 305,325 - -1.1 305,325 - -0.7 305,325 - +0.1 305,325 - -0.9 305,325 - +0.3 305,325 - +0.6 305,325 - -0.2 305,325 - -0.7 305,325 - +0.1 305,330 + -0.4 305,330 + +0.8 305,331 - +0.1 305,364 + QEN71_RS44140 0.11 -0.1 305,364 + QEN71_RS44140 0.11 +1.3 305,365 - QEN71_RS44140 0.11 -0.8 305,397 + QEN71_RS44140 0.14 +0.1 305,397 + QEN71_RS44140 0.14 -0.7 305,397 + QEN71_RS44140 0.14 +0.9 305,397 + QEN71_RS44140 0.14 -0.2 305,398 - QEN71_RS44140 0.15 -0.8 305,438 - QEN71_RS44140 0.19 -0.7 305,438 - QEN71_RS44140 0.19 -0.7 305,438 - QEN71_RS44140 0.19 -0.9 305,438 - QEN71_RS44140 0.19 +1.1 305,438 - QEN71_RS44140 0.19 -0.7 305,444 - QEN71_RS44140 0.20 -0.7 305,444 - QEN71_RS44140 0.20 +0.1 305,444 - QEN71_RS44140 0.20 +0.5 305,444 - QEN71_RS44140 0.20 -1.4 305,506 + QEN71_RS44140 0.27 -0.5 305,506 + QEN71_RS44140 0.27 -0.8 305,507 - QEN71_RS44140 0.27 -1.6 305,507 - QEN71_RS44140 0.27 -0.2 305,510 + QEN71_RS44140 0.27 +0.1 305,510 + QEN71_RS44140 0.27 +0.1 305,511 - QEN71_RS44140 0.27 -1.1 305,654 + QEN71_RS44140 0.44 +0.1 305,654 + QEN71_RS44140 0.44 +0.2 305,685 + QEN71_RS44140 0.47 -0.0 305,685 + QEN71_RS44140 0.47 -0.0 305,686 - QEN71_RS44140 0.48 -1.1 305,686 - QEN71_RS44140 0.48 -0.0 305,686 - QEN71_RS44140 0.48 -1.6 305,686 - QEN71_RS44140 0.48 -0.7 305,715 + QEN71_RS44140 0.51 -0.7 305,715 + QEN71_RS44140 0.51 -1.0 305,715 + QEN71_RS44140 0.51 -2.3 305,715 + QEN71_RS44140 0.51 -0.1 305,715 + QEN71_RS44140 0.51 +0.1 305,715 + QEN71_RS44140 0.51 -1.0 305,715 + QEN71_RS44140 0.51 -0.4 305,716 - QEN71_RS44140 0.51 -0.4 305,716 - QEN71_RS44140 0.51 -1.9 305,716 - QEN71_RS44140 0.51 -1.1 305,716 - QEN71_RS44140 0.51 +0.0 305,716 - QEN71_RS44140 0.51 -0.3 305,717 + QEN71_RS44140 0.51 -1.4 305,717 + QEN71_RS44140 0.51 -0.3 305,717 + QEN71_RS44140 0.51 +1.3 305,717 + QEN71_RS44140 0.51 +2.3 305,717 + QEN71_RS44140 0.51 -0.7 305,717 + QEN71_RS44140 0.51 -0.2 305,717 + QEN71_RS44140 0.51 -1.6 305,718 - QEN71_RS44140 0.51 -1.2 305,718 - QEN71_RS44140 0.51 -1.1 305,718 - QEN71_RS44140 0.51 -0.1 305,718 - QEN71_RS44140 0.51 -1.1 305,718 - QEN71_RS44140 0.51 -1.3 305,718 - QEN71_RS44140 0.51 +0.1 305,718 - QEN71_RS44140 0.51 -1.6 305,718 - QEN71_RS44140 0.51 -0.6 305,718 - QEN71_RS44140 0.51 -0.5 305,718 - QEN71_RS44140 0.51 -0.2 305,718 - QEN71_RS44140 0.51 -0.3 305,718 - QEN71_RS44140 0.51 -0.6 305,750 + QEN71_RS44140 0.55 +0.1 305,750 + QEN71_RS44140 0.55 -0.4 305,750 + QEN71_RS44140 0.55 +0.8 305,751 - QEN71_RS44140 0.55 -0.7 305,751 - QEN71_RS44140 0.55 -0.3 305,944 + QEN71_RS44140 0.77 -0.2 305,944 + QEN71_RS44140 0.77 -0.6 305,944 + QEN71_RS44140 0.77 +0.1 305,945 - QEN71_RS44140 0.77 -2.1 305,945 - QEN71_RS44140 0.77 +0.3 305,945 - QEN71_RS44140 0.77 -0.3 306,052 - QEN71_RS44140 0.89 +0.7 306,052 - QEN71_RS44140 0.89 -2.9 306,052 - QEN71_RS44140 0.89 +0.1 306,052 - QEN71_RS44140 0.89 +0.7 306,058 + -0.9 306,059 - -0.5 306,059 - -0.9 306,137 + +0.5 306,138 - -0.9 306,138 - -0.7 306,138 - -1.5 306,138 - -1.6 306,138 - +0.3 306,141 + -0.3 306,141 + -0.9 306,141 + -0.3 306,142 - -0.6 306,142 - -0.5 306,142 - -1.3 306,142 - +0.0 306,142 - -0.7 306,147 + -1.0 306,147 + +0.5 306,147 + -2.2 306,147 + +0.1 306,147 + -0.4 306,147 + +0.2 306,147 + -2.5 306,147 + -1.1 306,148 - -0.1 306,148 - -0.5 306,148 - -0.4 306,148 - -1.6 306,148 - +0.0 306,148 - -0.2 306,148 - +0.7 306,151 + +0.2 306,151 + -1.4 306,151 + +0.3 306,151 + -1.6 306,152 - -0.9 306,240 + -1.1 306,240 + +0.1 306,240 + -2.3 306,240 + -0.5 306,241 - -0.3 306,241 - -0.6 306,241 - +0.1 306,241 - +0.6 306,307 + +0.6 306,308 - +0.4 306,342 + -1.5 306,342 + +1.7 306,342 + -0.6 306,342 + -2.6 306,342 + +0.2 306,342 + -0.3 306,342 + -0.5 306,343 - +0.8 306,343 - -1.3 306,343 - -0.3 306,566 + +0.5 306,566 + -0.1 306,566 + -0.0 306,567 - +1.6 306,567 - -1.3 306,604 + -1.5 306,604 + -0.3 306,604 + +0.1 306,604 + -0.5 306,604 + +0.4 306,605 - -0.5 306,605 - -0.2 306,605 - -0.0 306,605 - -0.2 306,605 - -0.1 306,605 - +0.1 306,605 - -0.1 306,605 - -0.7 306,605 - +0.0 306,605 - +0.2 306,607 + -0.3 306,607 + +0.5 306,607 + +0.3 306,607 + -0.2 306,607 + +0.1 306,607 + -0.2 306,607 + -1.2 306,607 + -0.5 306,607 + -0.1 306,607 + +0.1 306,607 + +0.3 306,607 + -1.0 306,607 + +1.1 306,608 - -0.2 306,608 - -0.3 306,608 - -1.3 306,608 - -1.1 306,608 - -0.3 306,830 - +0.4 306,830 - -0.1 306,865 + -1.5 306,865 + +0.7 306,865 + +0.5 306,865 + -0.5 306,865 + -0.2 306,866 - -0.8 306,866 - -0.4 306,866 - +0.8 306,866 - -0.7 306,866 - -0.7 306,877 - -0.3 306,877 - -0.7 306,877 - +0.1 306,877 - -0.5 306,989 + +0.1 306,990 - -0.1 306,990 - -0.0 306,990 - +0.5 306,990 - -0.6 306,990 - -0.2 306,996 - +0.7 307,043 + -0.5 307,043 + -0.1 307,043 + -0.7 307,043 + +0.3 307,044 - +0.6 307,044 - -0.9 307,044 - +0.4 307,044 - -1.5 307,044 - -0.4 307,044 - +0.1 307,108 + -0.5 307,108 + -0.2 307,109 - +0.8 307,109 - -0.0 307,109 - +0.1
Or see this region's nucleotide sequence