Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37125 and QEN71_RS37130 are separated by 109 nucleotides QEN71_RS37130 and QEN71_RS37135 are separated by 42 nucleotides QEN71_RS37135 and QEN71_RS37140 are separated by 184 nucleotides QEN71_RS37140 and QEN71_RS37145 are separated by 132 nucleotides
QEN71_RS37125: QEN71_RS37125 - porin, at 1,697,232 to 1,698,395
_RS37125
QEN71_RS37130: QEN71_RS37130 - HAD family phosphatase, at 1,698,505 to 1,699,188
_RS37130
QEN71_RS37135: QEN71_RS37135 - HDOD domain-containing protein, at 1,699,231 to 1,700,697
_RS37135
QEN71_RS37140: QEN71_RS37140 - DUF3331 domain-containing protein, at 1,700,882 to 1,701,277
_RS37140
QEN71_RS37145: QEN71_RS37145 - TetR family transcriptional regulator, at 1,701,410 to 1,702,069
_RS37145
Position (kb) 1699
1700
1701 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1698.237 kb on + strand, within QEN71_RS37125 at 1698.237 kb on + strand, within QEN71_RS37125 at 1698.238 kb on - strand, within QEN71_RS37125 at 1698.238 kb on - strand, within QEN71_RS37125 at 1698.238 kb on - strand, within QEN71_RS37125 at 1698.252 kb on + strand, within QEN71_RS37125 at 1698.252 kb on + strand, within QEN71_RS37125 at 1698.253 kb on - strand, within QEN71_RS37125 at 1698.393 kb on + strand at 1698.393 kb on + strand at 1698.393 kb on + strand at 1698.394 kb on - strand at 1698.394 kb on - strand at 1698.394 kb on - strand at 1698.419 kb on + strand at 1698.420 kb on - strand at 1698.473 kb on - strand at 1698.473 kb on - strand at 1698.551 kb on + strand at 1698.552 kb on - strand at 1698.579 kb on + strand, within QEN71_RS37130 at 1698.898 kb on + strand, within QEN71_RS37130 at 1698.898 kb on + strand, within QEN71_RS37130 at 1698.899 kb on - strand, within QEN71_RS37130 at 1698.899 kb on - strand, within QEN71_RS37130 at 1698.961 kb on + strand, within QEN71_RS37130 at 1698.961 kb on + strand, within QEN71_RS37130 at 1698.961 kb on + strand, within QEN71_RS37130 at 1698.961 kb on + strand, within QEN71_RS37130 at 1698.961 kb on + strand, within QEN71_RS37130 at 1698.962 kb on - strand, within QEN71_RS37130 at 1698.962 kb on - strand, within QEN71_RS37130 at 1698.962 kb on - strand, within QEN71_RS37130 at 1699.361 kb on + strand at 1699.361 kb on + strand at 1699.361 kb on + strand at 1699.608 kb on - strand, within QEN71_RS37135 at 1699.904 kb on + strand, within QEN71_RS37135 at 1699.904 kb on + strand, within QEN71_RS37135 at 1699.904 kb on + strand, within QEN71_RS37135 at 1699.905 kb on - strand, within QEN71_RS37135 at 1699.905 kb on - strand, within QEN71_RS37135 at 1699.905 kb on - strand, within QEN71_RS37135 at 1699.905 kb on - strand, within QEN71_RS37135 at 1699.988 kb on + strand, within QEN71_RS37135 at 1699.988 kb on + strand, within QEN71_RS37135 at 1699.988 kb on + strand, within QEN71_RS37135 at 1699.988 kb on + strand, within QEN71_RS37135 at 1699.989 kb on - strand, within QEN71_RS37135 at 1699.989 kb on - strand, within QEN71_RS37135 at 1699.989 kb on - strand, within QEN71_RS37135 at 1699.989 kb on - strand, within QEN71_RS37135 at 1699.989 kb on - strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.014 kb on + strand, within QEN71_RS37135 at 1700.015 kb on - strand, within QEN71_RS37135 at 1700.015 kb on - strand, within QEN71_RS37135 at 1700.015 kb on - strand, within QEN71_RS37135 at 1700.015 kb on - strand, within QEN71_RS37135 at 1700.015 kb on - strand, within QEN71_RS37135 at 1700.015 kb on - strand, within QEN71_RS37135 at 1700.015 kb on - strand, within QEN71_RS37135 at 1700.015 kb on - strand, within QEN71_RS37135 at 1700.015 kb on - strand, within QEN71_RS37135 at 1700.216 kb on + strand, within QEN71_RS37135 at 1700.216 kb on + strand, within QEN71_RS37135 at 1700.216 kb on + strand, within QEN71_RS37135 at 1700.217 kb on + strand, within QEN71_RS37135 at 1700.469 kb on + strand, within QEN71_RS37135 at 1700.469 kb on + strand, within QEN71_RS37135 at 1700.469 kb on + strand, within QEN71_RS37135 at 1700.469 kb on + strand, within QEN71_RS37135 at 1700.470 kb on - strand, within QEN71_RS37135 at 1700.470 kb on - strand, within QEN71_RS37135 at 1700.489 kb on + strand, within QEN71_RS37135 at 1700.489 kb on + strand, within QEN71_RS37135 at 1700.489 kb on + strand, within QEN71_RS37135 at 1700.489 kb on + strand, within QEN71_RS37135 at 1700.489 kb on + strand, within QEN71_RS37135 at 1700.489 kb on + strand, within QEN71_RS37135 at 1700.489 kb on + strand, within QEN71_RS37135 at 1700.489 kb on + strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.490 kb on - strand, within QEN71_RS37135 at 1700.584 kb on - strand at 1700.719 kb on + strand at 1700.720 kb on - strand at 1700.720 kb on - strand at 1700.720 kb on - strand at 1700.720 kb on - strand at 1700.752 kb on + strand at 1700.752 kb on + strand at 1700.792 kb on + strand at 1700.792 kb on + strand at 1700.792 kb on + strand at 1700.792 kb on + strand at 1700.792 kb on + strand at 1700.793 kb on - strand at 1700.793 kb on - strand at 1700.793 kb on - strand at 1700.793 kb on - strand at 1700.834 kb on + strand at 1700.834 kb on + strand at 1700.834 kb on + strand at 1700.835 kb on - strand at 1700.835 kb on - strand at 1700.835 kb on - strand at 1700.870 kb on + strand at 1700.870 kb on + strand at 1700.870 kb on + strand at 1700.870 kb on + strand at 1700.870 kb on + strand at 1700.870 kb on + strand at 1700.870 kb on + strand at 1700.870 kb on + strand at 1700.870 kb on + strand at 1700.870 kb on + strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.871 kb on - strand at 1700.893 kb on + strand at 1700.894 kb on - strand at 1700.955 kb on + strand, within QEN71_RS37140 at 1700.956 kb on - strand, within QEN71_RS37140 at 1700.956 kb on - strand, within QEN71_RS37140 at 1700.956 kb on - strand, within QEN71_RS37140 at 1700.956 kb on - strand, within QEN71_RS37140 at 1701.281 kb on + strand at 1701.282 kb on - strand at 1701.282 kb on - strand at 1701.300 kb on + strand at 1701.312 kb on - strand at 1701.312 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 1,698,237 + QEN71_RS37125 0.86 -0.4 1,698,237 + QEN71_RS37125 0.86 -0.6 1,698,238 - QEN71_RS37125 0.86 -0.5 1,698,238 - QEN71_RS37125 0.86 +0.4 1,698,238 - QEN71_RS37125 0.86 -2.1 1,698,252 + QEN71_RS37125 0.88 +0.6 1,698,252 + QEN71_RS37125 0.88 -0.4 1,698,253 - QEN71_RS37125 0.88 -0.0 1,698,393 + +0.4 1,698,393 + -0.1 1,698,393 + -1.3 1,698,394 - +0.8 1,698,394 - -1.3 1,698,394 - -0.2 1,698,419 + -0.2 1,698,420 - -1.0 1,698,473 - -0.8 1,698,473 - +0.4 1,698,551 + +0.3 1,698,552 - +0.1 1,698,579 + QEN71_RS37130 0.11 -0.6 1,698,898 + QEN71_RS37130 0.57 -0.7 1,698,898 + QEN71_RS37130 0.57 -0.5 1,698,899 - QEN71_RS37130 0.58 -0.4 1,698,899 - QEN71_RS37130 0.58 -0.2 1,698,961 + QEN71_RS37130 0.67 -1.4 1,698,961 + QEN71_RS37130 0.67 +0.8 1,698,961 + QEN71_RS37130 0.67 +0.1 1,698,961 + QEN71_RS37130 0.67 +0.4 1,698,961 + QEN71_RS37130 0.67 +0.5 1,698,962 - QEN71_RS37130 0.67 +0.8 1,698,962 - QEN71_RS37130 0.67 +0.5 1,698,962 - QEN71_RS37130 0.67 +0.2 1,699,361 + -1.0 1,699,361 + +0.7 1,699,361 + -1.0 1,699,608 - QEN71_RS37135 0.26 -0.1 1,699,904 + QEN71_RS37135 0.46 -2.2 1,699,904 + QEN71_RS37135 0.46 +0.3 1,699,904 + QEN71_RS37135 0.46 -0.9 1,699,905 - QEN71_RS37135 0.46 -1.4 1,699,905 - QEN71_RS37135 0.46 -1.8 1,699,905 - QEN71_RS37135 0.46 -1.0 1,699,905 - QEN71_RS37135 0.46 +1.2 1,699,988 + QEN71_RS37135 0.52 -1.2 1,699,988 + QEN71_RS37135 0.52 -0.4 1,699,988 + QEN71_RS37135 0.52 -0.5 1,699,988 + QEN71_RS37135 0.52 -1.0 1,699,989 - QEN71_RS37135 0.52 -0.3 1,699,989 - QEN71_RS37135 0.52 -0.2 1,699,989 - QEN71_RS37135 0.52 +0.9 1,699,989 - QEN71_RS37135 0.52 -0.5 1,699,989 - QEN71_RS37135 0.52 -1.0 1,700,014 + QEN71_RS37135 0.53 -0.1 1,700,014 + QEN71_RS37135 0.53 -1.1 1,700,014 + QEN71_RS37135 0.53 +0.3 1,700,014 + QEN71_RS37135 0.53 +0.3 1,700,014 + QEN71_RS37135 0.53 +0.1 1,700,014 + QEN71_RS37135 0.53 -1.8 1,700,014 + QEN71_RS37135 0.53 -0.9 1,700,014 + QEN71_RS37135 0.53 -0.1 1,700,014 + QEN71_RS37135 0.53 -0.0 1,700,014 + QEN71_RS37135 0.53 -0.9 1,700,015 - QEN71_RS37135 0.53 -0.6 1,700,015 - QEN71_RS37135 0.53 -1.2 1,700,015 - QEN71_RS37135 0.53 -1.7 1,700,015 - QEN71_RS37135 0.53 -0.6 1,700,015 - QEN71_RS37135 0.53 -0.9 1,700,015 - QEN71_RS37135 0.53 -0.4 1,700,015 - QEN71_RS37135 0.53 -0.4 1,700,015 - QEN71_RS37135 0.53 -0.3 1,700,015 - QEN71_RS37135 0.53 -1.0 1,700,216 + QEN71_RS37135 0.67 -2.2 1,700,216 + QEN71_RS37135 0.67 +0.6 1,700,216 + QEN71_RS37135 0.67 -2.8 1,700,217 + QEN71_RS37135 0.67 -0.0 1,700,469 + QEN71_RS37135 0.84 -1.8 1,700,469 + QEN71_RS37135 0.84 +0.8 1,700,469 + QEN71_RS37135 0.84 -1.4 1,700,469 + QEN71_RS37135 0.84 -1.4 1,700,470 - QEN71_RS37135 0.84 +0.2 1,700,470 - QEN71_RS37135 0.84 -0.3 1,700,489 + QEN71_RS37135 0.86 -1.1 1,700,489 + QEN71_RS37135 0.86 -0.7 1,700,489 + QEN71_RS37135 0.86 -0.2 1,700,489 + QEN71_RS37135 0.86 -1.2 1,700,489 + QEN71_RS37135 0.86 -1.9 1,700,489 + QEN71_RS37135 0.86 -0.2 1,700,489 + QEN71_RS37135 0.86 -0.9 1,700,489 + QEN71_RS37135 0.86 +0.1 1,700,490 - QEN71_RS37135 0.86 -0.1 1,700,490 - QEN71_RS37135 0.86 -0.8 1,700,490 - QEN71_RS37135 0.86 +0.2 1,700,490 - QEN71_RS37135 0.86 -0.5 1,700,490 - QEN71_RS37135 0.86 -0.2 1,700,490 - QEN71_RS37135 0.86 -0.9 1,700,490 - QEN71_RS37135 0.86 -1.1 1,700,490 - QEN71_RS37135 0.86 -0.2 1,700,490 - QEN71_RS37135 0.86 +0.3 1,700,490 - QEN71_RS37135 0.86 -1.0 1,700,490 - QEN71_RS37135 0.86 +0.1 1,700,490 - QEN71_RS37135 0.86 -0.5 1,700,490 - QEN71_RS37135 0.86 -1.4 1,700,490 - QEN71_RS37135 0.86 -0.6 1,700,490 - QEN71_RS37135 0.86 -1.5 1,700,490 - QEN71_RS37135 0.86 -1.4 1,700,490 - QEN71_RS37135 0.86 -0.3 1,700,584 - +0.3 1,700,719 + -0.0 1,700,720 - -1.7 1,700,720 - +1.9 1,700,720 - -0.8 1,700,720 - +1.9 1,700,752 + -0.9 1,700,752 + -0.0 1,700,792 + -0.8 1,700,792 + -0.7 1,700,792 + -1.0 1,700,792 + +0.5 1,700,792 + -0.2 1,700,793 - -0.6 1,700,793 - +0.1 1,700,793 - -1.1 1,700,793 - +0.5 1,700,834 + -1.6 1,700,834 + +1.2 1,700,834 + +0.3 1,700,835 - -0.8 1,700,835 - -0.5 1,700,835 - -1.2 1,700,870 + -0.2 1,700,870 + +0.5 1,700,870 + +0.4 1,700,870 + -0.1 1,700,870 + -0.8 1,700,870 + +1.5 1,700,870 + -0.1 1,700,870 + -2.2 1,700,870 + -0.1 1,700,870 + +1.7 1,700,871 - +0.7 1,700,871 - -0.5 1,700,871 - +0.7 1,700,871 - +0.3 1,700,871 - -0.3 1,700,871 - +0.1 1,700,871 - -0.4 1,700,871 - -0.1 1,700,871 - -0.5 1,700,871 - -0.1 1,700,871 - -1.3 1,700,871 - -1.4 1,700,871 - -2.0 1,700,871 - -0.4 1,700,893 + -1.1 1,700,894 - -0.9 1,700,955 + QEN71_RS37140 0.18 +0.7 1,700,956 - QEN71_RS37140 0.19 -1.9 1,700,956 - QEN71_RS37140 0.19 -0.6 1,700,956 - QEN71_RS37140 0.19 +0.1 1,700,956 - QEN71_RS37140 0.19 +1.3 1,701,281 + -0.7 1,701,282 - -0.8 1,701,282 - -0.2 1,701,300 + -0.4 1,701,312 - -0.0 1,701,312 - -1.2
Or see this region's nucleotide sequence