Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS23315 and QEN71_RS23320 are separated by 58 nucleotides QEN71_RS23320 and QEN71_RS23325 are separated by 134 nucleotides
QEN71_RS23315: QEN71_RS23315 - hypothetical protein, at 5,190,565 to 5,191,029
_RS23315
QEN71_RS23320: QEN71_RS23320 - peroxiredoxin, at 5,191,088 to 5,191,645
_RS23320
QEN71_RS23325: QEN71_RS23325 - EAL domain-containing protein, at 5,191,780 to 5,193,105
_RS23325
Position (kb) 5191
5192 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5190.240 kb on - strand at 5190.240 kb on - strand at 5190.240 kb on - strand at 5190.240 kb on - strand at 5190.240 kb on - strand at 5190.240 kb on - strand at 5190.298 kb on + strand at 5190.298 kb on + strand at 5190.298 kb on + strand at 5190.298 kb on + strand at 5190.530 kb on + strand at 5190.667 kb on - strand, within QEN71_RS23315 at 5190.735 kb on + strand, within QEN71_RS23315 at 5190.735 kb on + strand, within QEN71_RS23315 at 5190.736 kb on - strand, within QEN71_RS23315 at 5190.738 kb on - strand, within QEN71_RS23315 at 5190.847 kb on - strand, within QEN71_RS23315 at 5190.986 kb on + strand at 5190.986 kb on + strand at 5190.987 kb on - strand at 5190.987 kb on - strand at 5190.987 kb on - strand at 5191.023 kb on + strand at 5191.024 kb on - strand at 5191.024 kb on - strand at 5191.037 kb on - strand at 5191.037 kb on - strand at 5191.051 kb on + strand at 5191.051 kb on + strand at 5191.052 kb on - strand at 5191.052 kb on - strand at 5191.052 kb on - strand at 5191.052 kb on - strand at 5191.052 kb on - strand at 5191.089 kb on + strand at 5191.089 kb on + strand at 5191.089 kb on + strand at 5191.090 kb on - strand at 5191.090 kb on - strand at 5191.090 kb on - strand at 5191.090 kb on - strand at 5191.090 kb on - strand at 5191.093 kb on + strand at 5191.093 kb on + strand at 5191.093 kb on + strand at 5191.094 kb on - strand at 5191.094 kb on - strand at 5191.094 kb on - strand at 5191.094 kb on - strand at 5191.094 kb on - strand at 5191.094 kb on - strand at 5191.094 kb on - strand at 5191.164 kb on + strand, within QEN71_RS23320 at 5191.164 kb on + strand, within QEN71_RS23320 at 5191.165 kb on - strand, within QEN71_RS23320 at 5191.165 kb on - strand, within QEN71_RS23320 at 5191.165 kb on - strand, within QEN71_RS23320 at 5191.165 kb on - strand, within QEN71_RS23320 at 5191.170 kb on + strand, within QEN71_RS23320 at 5191.170 kb on + strand, within QEN71_RS23320 at 5191.170 kb on + strand, within QEN71_RS23320 at 5191.171 kb on - strand, within QEN71_RS23320 at 5191.171 kb on - strand, within QEN71_RS23320 at 5191.192 kb on + strand, within QEN71_RS23320 at 5191.192 kb on + strand, within QEN71_RS23320 at 5191.193 kb on - strand, within QEN71_RS23320 at 5191.193 kb on - strand, within QEN71_RS23320 at 5191.200 kb on + strand, within QEN71_RS23320 at 5191.200 kb on + strand, within QEN71_RS23320 at 5191.201 kb on - strand, within QEN71_RS23320 at 5191.201 kb on - strand, within QEN71_RS23320 at 5191.201 kb on - strand, within QEN71_RS23320 at 5191.201 kb on - strand, within QEN71_RS23320 at 5191.201 kb on - strand, within QEN71_RS23320 at 5191.201 kb on - strand, within QEN71_RS23320 at 5191.249 kb on - strand, within QEN71_RS23320 at 5191.371 kb on + strand, within QEN71_RS23320 at 5191.372 kb on - strand, within QEN71_RS23320 at 5191.372 kb on - strand, within QEN71_RS23320 at 5191.380 kb on + strand, within QEN71_RS23320 at 5191.380 kb on + strand, within QEN71_RS23320 at 5191.381 kb on - strand, within QEN71_RS23320 at 5191.381 kb on - strand, within QEN71_RS23320 at 5191.381 kb on - strand, within QEN71_RS23320 at 5191.447 kb on - strand, within QEN71_RS23320 at 5191.453 kb on - strand, within QEN71_RS23320 at 5191.453 kb on - strand, within QEN71_RS23320 at 5191.453 kb on - strand, within QEN71_RS23320 at 5191.453 kb on - strand, within QEN71_RS23320 at 5191.453 kb on - strand, within QEN71_RS23320 at 5191.453 kb on - strand, within QEN71_RS23320 at 5191.453 kb on - strand, within QEN71_RS23320 at 5191.453 kb on - strand, within QEN71_RS23320 at 5191.494 kb on + strand, within QEN71_RS23320 at 5191.494 kb on + strand, within QEN71_RS23320 at 5191.494 kb on + strand, within QEN71_RS23320 at 5191.494 kb on + strand, within QEN71_RS23320 at 5191.494 kb on + strand, within QEN71_RS23320 at 5191.495 kb on - strand, within QEN71_RS23320 at 5191.495 kb on - strand, within QEN71_RS23320 at 5191.495 kb on - strand, within QEN71_RS23320 at 5191.495 kb on - strand, within QEN71_RS23320 at 5191.495 kb on - strand, within QEN71_RS23320 at 5191.495 kb on - strand, within QEN71_RS23320 at 5191.495 kb on - strand, within QEN71_RS23320 at 5191.500 kb on + strand, within QEN71_RS23320 at 5191.500 kb on + strand, within QEN71_RS23320 at 5191.500 kb on + strand, within QEN71_RS23320 at 5191.500 kb on + strand, within QEN71_RS23320 at 5191.500 kb on + strand, within QEN71_RS23320 at 5191.500 kb on + strand, within QEN71_RS23320 at 5191.501 kb on - strand, within QEN71_RS23320 at 5191.501 kb on - strand, within QEN71_RS23320 at 5191.501 kb on - strand, within QEN71_RS23320 at 5191.675 kb on + strand at 5191.741 kb on + strand at 5191.742 kb on - strand at 5192.193 kb on - strand, within QEN71_RS23325 at 5192.193 kb on - strand, within QEN71_RS23325 at 5192.265 kb on + strand, within QEN71_RS23325 at 5192.459 kb on + strand, within QEN71_RS23325 at 5192.460 kb on - strand, within QEN71_RS23325 at 5192.460 kb on - strand, within QEN71_RS23325 at 5192.639 kb on + strand, within QEN71_RS23325 at 5192.639 kb on + strand, within QEN71_RS23325 at 5192.640 kb on - strand, within QEN71_RS23325
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 5,190,240 - +0.5 5,190,240 - +0.2 5,190,240 - +0.3 5,190,240 - +0.1 5,190,240 - -0.7 5,190,240 - -0.8 5,190,298 + +1.1 5,190,298 + -0.6 5,190,298 + +0.4 5,190,298 + -2.1 5,190,530 + +0.0 5,190,667 - QEN71_RS23315 0.22 -1.4 5,190,735 + QEN71_RS23315 0.37 -0.6 5,190,735 + QEN71_RS23315 0.37 +0.2 5,190,736 - QEN71_RS23315 0.37 -1.3 5,190,738 - QEN71_RS23315 0.37 +0.7 5,190,847 - QEN71_RS23315 0.61 -0.4 5,190,986 + -0.0 5,190,986 + +0.1 5,190,987 - -0.5 5,190,987 - -0.8 5,190,987 - -0.1 5,191,023 + +0.5 5,191,024 - -0.0 5,191,024 - +0.4 5,191,037 - +0.4 5,191,037 - +0.3 5,191,051 + +1.2 5,191,051 + +0.0 5,191,052 - -0.8 5,191,052 - -0.6 5,191,052 - -1.0 5,191,052 - -0.1 5,191,052 - -0.3 5,191,089 + -1.6 5,191,089 + -0.4 5,191,089 + +0.1 5,191,090 - -0.1 5,191,090 - +0.8 5,191,090 - -0.2 5,191,090 - -1.1 5,191,090 - +1.4 5,191,093 + +0.9 5,191,093 + +0.4 5,191,093 + -0.9 5,191,094 - -0.8 5,191,094 - +1.9 5,191,094 - -0.4 5,191,094 - +0.3 5,191,094 - -1.1 5,191,094 - -1.9 5,191,094 - -0.5 5,191,164 + QEN71_RS23320 0.14 -0.3 5,191,164 + QEN71_RS23320 0.14 -0.4 5,191,165 - QEN71_RS23320 0.14 +0.3 5,191,165 - QEN71_RS23320 0.14 -0.1 5,191,165 - QEN71_RS23320 0.14 -1.5 5,191,165 - QEN71_RS23320 0.14 +1.5 5,191,170 + QEN71_RS23320 0.15 +0.4 5,191,170 + QEN71_RS23320 0.15 -2.0 5,191,170 + QEN71_RS23320 0.15 -0.8 5,191,171 - QEN71_RS23320 0.15 +1.1 5,191,171 - QEN71_RS23320 0.15 -1.4 5,191,192 + QEN71_RS23320 0.19 +0.7 5,191,192 + QEN71_RS23320 0.19 -0.4 5,191,193 - QEN71_RS23320 0.19 +0.6 5,191,193 - QEN71_RS23320 0.19 -1.8 5,191,200 + QEN71_RS23320 0.20 +0.2 5,191,200 + QEN71_RS23320 0.20 -0.8 5,191,201 - QEN71_RS23320 0.20 +0.4 5,191,201 - QEN71_RS23320 0.20 -0.4 5,191,201 - QEN71_RS23320 0.20 -0.3 5,191,201 - QEN71_RS23320 0.20 -0.6 5,191,201 - QEN71_RS23320 0.20 -0.5 5,191,201 - QEN71_RS23320 0.20 +0.0 5,191,249 - QEN71_RS23320 0.29 -0.4 5,191,371 + QEN71_RS23320 0.51 -0.4 5,191,372 - QEN71_RS23320 0.51 -0.2 5,191,372 - QEN71_RS23320 0.51 -1.0 5,191,380 + QEN71_RS23320 0.52 -0.5 5,191,380 + QEN71_RS23320 0.52 -1.0 5,191,381 - QEN71_RS23320 0.53 -0.3 5,191,381 - QEN71_RS23320 0.53 -0.2 5,191,381 - QEN71_RS23320 0.53 -0.7 5,191,447 - QEN71_RS23320 0.64 +0.9 5,191,453 - QEN71_RS23320 0.65 -0.1 5,191,453 - QEN71_RS23320 0.65 +0.3 5,191,453 - QEN71_RS23320 0.65 -0.4 5,191,453 - QEN71_RS23320 0.65 +1.0 5,191,453 - QEN71_RS23320 0.65 -1.9 5,191,453 - QEN71_RS23320 0.65 +0.3 5,191,453 - QEN71_RS23320 0.65 -0.3 5,191,453 - QEN71_RS23320 0.65 -1.4 5,191,494 + QEN71_RS23320 0.73 +0.4 5,191,494 + QEN71_RS23320 0.73 -0.3 5,191,494 + QEN71_RS23320 0.73 -0.6 5,191,494 + QEN71_RS23320 0.73 +0.8 5,191,494 + QEN71_RS23320 0.73 -0.3 5,191,495 - QEN71_RS23320 0.73 +0.7 5,191,495 - QEN71_RS23320 0.73 +0.0 5,191,495 - QEN71_RS23320 0.73 -1.7 5,191,495 - QEN71_RS23320 0.73 +1.9 5,191,495 - QEN71_RS23320 0.73 -0.6 5,191,495 - QEN71_RS23320 0.73 -0.6 5,191,495 - QEN71_RS23320 0.73 -0.9 5,191,500 + QEN71_RS23320 0.74 -0.7 5,191,500 + QEN71_RS23320 0.74 +0.8 5,191,500 + QEN71_RS23320 0.74 -0.4 5,191,500 + QEN71_RS23320 0.74 -2.2 5,191,500 + QEN71_RS23320 0.74 -0.7 5,191,500 + QEN71_RS23320 0.74 -0.9 5,191,501 - QEN71_RS23320 0.74 -1.7 5,191,501 - QEN71_RS23320 0.74 -0.2 5,191,501 - QEN71_RS23320 0.74 -0.2 5,191,675 + +0.7 5,191,741 + -1.6 5,191,742 - -0.1 5,192,193 - QEN71_RS23325 0.31 -2.1 5,192,193 - QEN71_RS23325 0.31 -0.3 5,192,265 + QEN71_RS23325 0.37 -0.2 5,192,459 + QEN71_RS23325 0.51 -0.2 5,192,460 - QEN71_RS23325 0.51 +0.7 5,192,460 - QEN71_RS23325 0.51 -0.1 5,192,639 + QEN71_RS23325 0.65 +0.5 5,192,639 + QEN71_RS23325 0.65 -0.5 5,192,640 - QEN71_RS23325 0.65 -1.7
Or see this region's nucleotide sequence