Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS04465 and QEN71_RS04470 are separated by 71 nucleotides QEN71_RS04470 and QEN71_RS04475 overlap by 1 nucleotides QEN71_RS04475 and QEN71_RS04480 are separated by 72 nucleotides
QEN71_RS04465: QEN71_RS04465 - DNA recombination protein RmuC, at 981,611 to 983,095
_RS04465
QEN71_RS04470: QEN71_RS04470 - GNAT family N-acetyltransferase, at 983,167 to 983,655
_RS04470
QEN71_RS04475: QEN71_RS04475 - hypothetical protein, at 983,655 to 983,930
_RS04475
QEN71_RS04480: QEN71_RS04480 - molybdopterin-binding protein, at 984,003 to 985,298
_RS04480
Position (kb) 983
984 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.661 kb on + strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.662 kb on - strand, within QEN71_RS04465 at 982.678 kb on + strand, within QEN71_RS04465 at 982.678 kb on + strand, within QEN71_RS04465 at 982.679 kb on - strand, within QEN71_RS04465 at 982.679 kb on - strand, within QEN71_RS04465 at 982.679 kb on - strand, within QEN71_RS04465 at 982.721 kb on + strand, within QEN71_RS04465 at 982.721 kb on + strand, within QEN71_RS04465 at 982.721 kb on + strand, within QEN71_RS04465 at 982.721 kb on + strand, within QEN71_RS04465 at 982.721 kb on + strand, within QEN71_RS04465 at 982.722 kb on - strand, within QEN71_RS04465 at 982.722 kb on - strand, within QEN71_RS04465 at 982.722 kb on - strand, within QEN71_RS04465 at 982.722 kb on - strand, within QEN71_RS04465 at 982.722 kb on - strand, within QEN71_RS04465 at 982.722 kb on - strand, within QEN71_RS04465 at 982.773 kb on - strand, within QEN71_RS04465 at 983.093 kb on + strand at 983.094 kb on - strand at 983.094 kb on - strand at 983.094 kb on - strand at 983.126 kb on - strand at 983.132 kb on + strand at 983.132 kb on + strand at 983.132 kb on + strand at 983.149 kb on + strand at 983.149 kb on + strand at 983.223 kb on + strand, within QEN71_RS04470 at 983.223 kb on + strand, within QEN71_RS04470 at 983.224 kb on - strand, within QEN71_RS04470 at 983.224 kb on - strand, within QEN71_RS04470 at 983.262 kb on - strand, within QEN71_RS04470 at 983.262 kb on - strand, within QEN71_RS04470 at 983.262 kb on - strand, within QEN71_RS04470 at 983.262 kb on - strand, within QEN71_RS04470 at 983.293 kb on + strand, within QEN71_RS04470 at 983.294 kb on - strand, within QEN71_RS04470 at 983.396 kb on + strand, within QEN71_RS04470 at 983.396 kb on + strand, within QEN71_RS04470 at 983.396 kb on + strand, within QEN71_RS04470 at 983.396 kb on + strand, within QEN71_RS04470 at 983.396 kb on + strand, within QEN71_RS04470 at 983.396 kb on + strand, within QEN71_RS04470 at 983.397 kb on - strand, within QEN71_RS04470 at 983.397 kb on - strand, within QEN71_RS04470 at 983.397 kb on - strand, within QEN71_RS04470 at 983.397 kb on - strand, within QEN71_RS04470 at 983.397 kb on - strand, within QEN71_RS04470 at 983.397 kb on - strand, within QEN71_RS04470 at 983.397 kb on - strand, within QEN71_RS04470 at 983.397 kb on - strand, within QEN71_RS04470 at 983.411 kb on + strand, within QEN71_RS04470 at 983.412 kb on - strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.441 kb on + strand, within QEN71_RS04470 at 983.442 kb on - strand, within QEN71_RS04470 at 983.442 kb on - strand, within QEN71_RS04470 at 983.442 kb on - strand, within QEN71_RS04470 at 983.442 kb on - strand, within QEN71_RS04470 at 983.442 kb on - strand, within QEN71_RS04470 at 983.442 kb on - strand, within QEN71_RS04470 at 983.442 kb on - strand, within QEN71_RS04470 at 983.445 kb on + strand, within QEN71_RS04470 at 983.445 kb on + strand, within QEN71_RS04470 at 983.445 kb on + strand, within QEN71_RS04470 at 983.445 kb on + strand, within QEN71_RS04470 at 983.446 kb on - strand, within QEN71_RS04470 at 983.446 kb on - strand, within QEN71_RS04470 at 983.446 kb on - strand, within QEN71_RS04470 at 983.446 kb on - strand, within QEN71_RS04470 at 983.594 kb on + strand, within QEN71_RS04470 at 983.594 kb on + strand, within QEN71_RS04470 at 983.594 kb on + strand, within QEN71_RS04470 at 983.594 kb on + strand, within QEN71_RS04470 at 983.594 kb on + strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.595 kb on - strand, within QEN71_RS04470 at 983.656 kb on + strand at 983.656 kb on + strand at 983.656 kb on + strand at 983.656 kb on + strand at 983.656 kb on + strand at 983.657 kb on - strand at 983.657 kb on - strand at 983.657 kb on - strand at 983.657 kb on - strand at 983.657 kb on - strand at 983.657 kb on - strand at 983.657 kb on - strand at 983.657 kb on - strand at 983.657 kb on - strand at 983.657 kb on - strand at 983.722 kb on + strand, within QEN71_RS04475 at 983.722 kb on + strand, within QEN71_RS04475 at 983.722 kb on + strand, within QEN71_RS04475 at 983.722 kb on + strand, within QEN71_RS04475 at 983.722 kb on + strand, within QEN71_RS04475 at 983.722 kb on + strand, within QEN71_RS04475 at 983.723 kb on - strand, within QEN71_RS04475 at 983.723 kb on - strand, within QEN71_RS04475 at 983.723 kb on - strand, within QEN71_RS04475 at 983.723 kb on - strand, within QEN71_RS04475 at 983.723 kb on - strand, within QEN71_RS04475 at 983.723 kb on - strand, within QEN71_RS04475 at 983.723 kb on - strand, within QEN71_RS04475 at 983.723 kb on - strand, within QEN71_RS04475 at 983.723 kb on - strand, within QEN71_RS04475 at 983.870 kb on - strand, within QEN71_RS04475 at 983.870 kb on - strand, within QEN71_RS04475 at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.932 kb on + strand at 983.933 kb on - strand at 983.933 kb on - strand at 983.933 kb on - strand at 983.933 kb on - strand at 983.933 kb on - strand at 983.933 kb on - strand at 983.933 kb on - strand at 983.933 kb on - strand at 983.945 kb on + strand at 983.945 kb on + strand at 983.945 kb on + strand at 983.945 kb on + strand at 983.945 kb on + strand at 983.945 kb on + strand at 983.945 kb on + strand at 983.945 kb on + strand at 983.945 kb on + strand at 983.946 kb on - strand at 983.946 kb on - strand at 983.946 kb on - strand at 983.946 kb on - strand at 983.946 kb on - strand at 983.946 kb on - strand at 983.946 kb on - strand at 983.952 kb on + strand at 983.952 kb on + strand at 983.953 kb on - strand at 983.953 kb on - strand at 984.029 kb on + strand at 984.029 kb on + strand at 984.030 kb on - strand at 984.080 kb on + strand at 984.459 kb on + strand, within QEN71_RS04480 at 984.459 kb on + strand, within QEN71_RS04480 at 984.459 kb on + strand, within QEN71_RS04480 at 984.459 kb on + strand, within QEN71_RS04480 at 984.459 kb on + strand, within QEN71_RS04480 at 984.459 kb on + strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.460 kb on - strand, within QEN71_RS04480 at 984.634 kb on + strand, within QEN71_RS04480 at 984.634 kb on + strand, within QEN71_RS04480 at 984.635 kb on - strand, within QEN71_RS04480 at 984.635 kb on - strand, within QEN71_RS04480 at 984.635 kb on - strand, within QEN71_RS04480 at 984.635 kb on - strand, within QEN71_RS04480 at 984.649 kb on + strand, within QEN71_RS04480 at 984.649 kb on + strand, within QEN71_RS04480 at 984.650 kb on - strand, within QEN71_RS04480 at 984.650 kb on - strand, within QEN71_RS04480 at 984.860 kb on + strand, within QEN71_RS04480 at 984.860 kb on + strand, within QEN71_RS04480 at 984.861 kb on - strand, within QEN71_RS04480 at 984.861 kb on - strand, within QEN71_RS04480
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 982,661 + QEN71_RS04465 0.71 +0.2 982,661 + QEN71_RS04465 0.71 -0.2 982,661 + QEN71_RS04465 0.71 -0.4 982,661 + QEN71_RS04465 0.71 +0.2 982,661 + QEN71_RS04465 0.71 +0.7 982,661 + QEN71_RS04465 0.71 +0.1 982,661 + QEN71_RS04465 0.71 -1.1 982,661 + QEN71_RS04465 0.71 -0.1 982,661 + QEN71_RS04465 0.71 -2.2 982,661 + QEN71_RS04465 0.71 -0.8 982,661 + QEN71_RS04465 0.71 -0.6 982,661 + QEN71_RS04465 0.71 -1.2 982,661 + QEN71_RS04465 0.71 -1.9 982,661 + QEN71_RS04465 0.71 -0.6 982,661 + QEN71_RS04465 0.71 +0.9 982,662 - QEN71_RS04465 0.71 -1.2 982,662 - QEN71_RS04465 0.71 +1.6 982,662 - QEN71_RS04465 0.71 +0.2 982,662 - QEN71_RS04465 0.71 -2.1 982,662 - QEN71_RS04465 0.71 +0.0 982,662 - QEN71_RS04465 0.71 -0.5 982,662 - QEN71_RS04465 0.71 -1.0 982,662 - QEN71_RS04465 0.71 +0.6 982,662 - QEN71_RS04465 0.71 +1.2 982,662 - QEN71_RS04465 0.71 -0.7 982,662 - QEN71_RS04465 0.71 +0.1 982,662 - QEN71_RS04465 0.71 -0.8 982,662 - QEN71_RS04465 0.71 -3.1 982,662 - QEN71_RS04465 0.71 +0.0 982,678 + QEN71_RS04465 0.72 -0.2 982,678 + QEN71_RS04465 0.72 +0.1 982,679 - QEN71_RS04465 0.72 -2.1 982,679 - QEN71_RS04465 0.72 -2.0 982,679 - QEN71_RS04465 0.72 +0.1 982,721 + QEN71_RS04465 0.75 -0.8 982,721 + QEN71_RS04465 0.75 -0.6 982,721 + QEN71_RS04465 0.75 -2.1 982,721 + QEN71_RS04465 0.75 +1.0 982,721 + QEN71_RS04465 0.75 +0.4 982,722 - QEN71_RS04465 0.75 -0.8 982,722 - QEN71_RS04465 0.75 +0.2 982,722 - QEN71_RS04465 0.75 -0.8 982,722 - QEN71_RS04465 0.75 -0.2 982,722 - QEN71_RS04465 0.75 -0.4 982,722 - QEN71_RS04465 0.75 +0.7 982,773 - QEN71_RS04465 0.78 +0.3 983,093 + +1.6 983,094 - +0.3 983,094 - -0.8 983,094 - +0.3 983,126 - -1.2 983,132 + +0.3 983,132 + +0.6 983,132 + -0.4 983,149 + -0.9 983,149 + +1.2 983,223 + QEN71_RS04470 0.11 +0.7 983,223 + QEN71_RS04470 0.11 -0.3 983,224 - QEN71_RS04470 0.12 -0.3 983,224 - QEN71_RS04470 0.12 -1.6 983,262 - QEN71_RS04470 0.19 -0.8 983,262 - QEN71_RS04470 0.19 +0.5 983,262 - QEN71_RS04470 0.19 -1.2 983,262 - QEN71_RS04470 0.19 -2.2 983,293 + QEN71_RS04470 0.26 -0.6 983,294 - QEN71_RS04470 0.26 -0.1 983,396 + QEN71_RS04470 0.47 -0.4 983,396 + QEN71_RS04470 0.47 -0.9 983,396 + QEN71_RS04470 0.47 -0.6 983,396 + QEN71_RS04470 0.47 +0.1 983,396 + QEN71_RS04470 0.47 +0.2 983,396 + QEN71_RS04470 0.47 +1.6 983,397 - QEN71_RS04470 0.47 -0.1 983,397 - QEN71_RS04470 0.47 +1.0 983,397 - QEN71_RS04470 0.47 +0.1 983,397 - QEN71_RS04470 0.47 +0.1 983,397 - QEN71_RS04470 0.47 +1.8 983,397 - QEN71_RS04470 0.47 +0.2 983,397 - QEN71_RS04470 0.47 +1.7 983,397 - QEN71_RS04470 0.47 -0.2 983,411 + QEN71_RS04470 0.50 +0.1 983,412 - QEN71_RS04470 0.50 +0.2 983,441 + QEN71_RS04470 0.56 +2.2 983,441 + QEN71_RS04470 0.56 -0.0 983,441 + QEN71_RS04470 0.56 -0.2 983,441 + QEN71_RS04470 0.56 -0.7 983,441 + QEN71_RS04470 0.56 -0.6 983,441 + QEN71_RS04470 0.56 -0.3 983,441 + QEN71_RS04470 0.56 +0.7 983,441 + QEN71_RS04470 0.56 -0.5 983,441 + QEN71_RS04470 0.56 -0.1 983,441 + QEN71_RS04470 0.56 +0.4 983,441 + QEN71_RS04470 0.56 +2.2 983,442 - QEN71_RS04470 0.56 -1.8 983,442 - QEN71_RS04470 0.56 -0.9 983,442 - QEN71_RS04470 0.56 +1.1 983,442 - QEN71_RS04470 0.56 +0.5 983,442 - QEN71_RS04470 0.56 +0.6 983,442 - QEN71_RS04470 0.56 +0.9 983,442 - QEN71_RS04470 0.56 -0.3 983,445 + QEN71_RS04470 0.57 +0.3 983,445 + QEN71_RS04470 0.57 -0.2 983,445 + QEN71_RS04470 0.57 +2.3 983,445 + QEN71_RS04470 0.57 -0.3 983,446 - QEN71_RS04470 0.57 +0.0 983,446 - QEN71_RS04470 0.57 +0.6 983,446 - QEN71_RS04470 0.57 +0.7 983,446 - QEN71_RS04470 0.57 -0.8 983,594 + QEN71_RS04470 0.87 +1.0 983,594 + QEN71_RS04470 0.87 -1.5 983,594 + QEN71_RS04470 0.87 +0.9 983,594 + QEN71_RS04470 0.87 +0.2 983,594 + QEN71_RS04470 0.87 +1.4 983,595 - QEN71_RS04470 0.88 +0.4 983,595 - QEN71_RS04470 0.88 -0.3 983,595 - QEN71_RS04470 0.88 +2.6 983,595 - QEN71_RS04470 0.88 -0.8 983,595 - QEN71_RS04470 0.88 +0.0 983,595 - QEN71_RS04470 0.88 -0.3 983,595 - QEN71_RS04470 0.88 -0.4 983,595 - QEN71_RS04470 0.88 -0.2 983,595 - QEN71_RS04470 0.88 +0.1 983,595 - QEN71_RS04470 0.88 -0.4 983,595 - QEN71_RS04470 0.88 +0.5 983,595 - QEN71_RS04470 0.88 +0.3 983,595 - QEN71_RS04470 0.88 -2.1 983,656 + +0.5 983,656 + +1.6 983,656 + -1.0 983,656 + +1.0 983,656 + +0.4 983,657 - -0.2 983,657 - -0.8 983,657 - +1.2 983,657 - -0.0 983,657 - -0.0 983,657 - +0.4 983,657 - -0.5 983,657 - -0.0 983,657 - +0.3 983,657 - +0.2 983,722 + QEN71_RS04475 0.24 -0.5 983,722 + QEN71_RS04475 0.24 -1.3 983,722 + QEN71_RS04475 0.24 -0.6 983,722 + QEN71_RS04475 0.24 -0.3 983,722 + QEN71_RS04475 0.24 +1.1 983,722 + QEN71_RS04475 0.24 -0.7 983,723 - QEN71_RS04475 0.25 -0.6 983,723 - QEN71_RS04475 0.25 -3.0 983,723 - QEN71_RS04475 0.25 -0.3 983,723 - QEN71_RS04475 0.25 +1.4 983,723 - QEN71_RS04475 0.25 -1.3 983,723 - QEN71_RS04475 0.25 -0.0 983,723 - QEN71_RS04475 0.25 -0.6 983,723 - QEN71_RS04475 0.25 +0.4 983,723 - QEN71_RS04475 0.25 -1.9 983,870 - QEN71_RS04475 0.78 -1.3 983,870 - QEN71_RS04475 0.78 -0.8 983,932 + -1.0 983,932 + -0.4 983,932 + +1.1 983,932 + +0.4 983,932 + -0.2 983,932 + +2.2 983,932 + -0.3 983,932 + -0.1 983,932 + +1.4 983,932 + +0.6 983,932 + -0.1 983,932 + +0.2 983,932 + +1.7 983,933 - +0.9 983,933 - -0.1 983,933 - -1.5 983,933 - -0.5 983,933 - +0.2 983,933 - +0.3 983,933 - -0.9 983,933 - +1.0 983,945 + +1.2 983,945 + +0.7 983,945 + +0.1 983,945 + +0.3 983,945 + -1.3 983,945 + -0.2 983,945 + -0.3 983,945 + -0.6 983,945 + -1.5 983,946 - -0.7 983,946 - -0.3 983,946 - +0.8 983,946 - -0.7 983,946 - -0.8 983,946 - +0.4 983,946 - -0.3 983,952 + +0.8 983,952 + -2.1 983,953 - -0.8 983,953 - -0.4 984,029 + -0.1 984,029 + +0.9 984,030 - -0.5 984,080 + -0.2 984,459 + QEN71_RS04480 0.35 -0.2 984,459 + QEN71_RS04480 0.35 -0.0 984,459 + QEN71_RS04480 0.35 +1.6 984,459 + QEN71_RS04480 0.35 +1.4 984,459 + QEN71_RS04480 0.35 -0.6 984,459 + QEN71_RS04480 0.35 -1.2 984,460 - QEN71_RS04480 0.35 +0.1 984,460 - QEN71_RS04480 0.35 -0.6 984,460 - QEN71_RS04480 0.35 -0.4 984,460 - QEN71_RS04480 0.35 +1.0 984,460 - QEN71_RS04480 0.35 -0.5 984,460 - QEN71_RS04480 0.35 +0.4 984,460 - QEN71_RS04480 0.35 +1.0 984,460 - QEN71_RS04480 0.35 -0.6 984,460 - QEN71_RS04480 0.35 -0.1 984,460 - QEN71_RS04480 0.35 -0.9 984,460 - QEN71_RS04480 0.35 +0.9 984,460 - QEN71_RS04480 0.35 -1.7 984,460 - QEN71_RS04480 0.35 -0.8 984,460 - QEN71_RS04480 0.35 -0.8 984,634 + QEN71_RS04480 0.49 -0.2 984,634 + QEN71_RS04480 0.49 -0.8 984,635 - QEN71_RS04480 0.49 -0.2 984,635 - QEN71_RS04480 0.49 -0.9 984,635 - QEN71_RS04480 0.49 +0.6 984,635 - QEN71_RS04480 0.49 -0.9 984,649 + QEN71_RS04480 0.50 +1.2 984,649 + QEN71_RS04480 0.50 -0.8 984,650 - QEN71_RS04480 0.50 -1.2 984,650 - QEN71_RS04480 0.50 -0.2 984,860 + QEN71_RS04480 0.66 -1.2 984,860 + QEN71_RS04480 0.66 +0.4 984,861 - QEN71_RS04480 0.66 -0.3 984,861 - QEN71_RS04480 0.66 -1.5
Or see this region's nucleotide sequence