Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS02555 and QEN71_RS02560 are separated by 12 nucleotides QEN71_RS02560 and QEN71_RS02565 are separated by 74 nucleotides QEN71_RS02565 and QEN71_RS02570 overlap by 8 nucleotides QEN71_RS02570 and QEN71_RS02575 overlap by 4 nucleotides
QEN71_RS02555: QEN71_RS02555 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 573,620 to 574,726
_RS02555
QEN71_RS02560: QEN71_RS02560 - S-formylglutathione hydrolase, at 574,739 to 575,584
_RS02560
QEN71_RS02565: QEN71_RS02565 - metal ABC transporter permease, at 575,659 to 576,450
_RS02565
QEN71_RS02570: QEN71_RS02570 - ABC transporter ATP-binding protein, at 576,443 to 577,384
_RS02570
QEN71_RS02575: QEN71_RS02575 - metal ABC transporter solute-binding protein, at 577,381 to 578,319
_RS02575
Position (kb) 575
576
577 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 574.721 kb on + strand at 574.721 kb on + strand at 574.721 kb on + strand at 574.721 kb on + strand at 574.721 kb on + strand at 574.722 kb on - strand at 574.722 kb on - strand at 574.722 kb on - strand at 574.722 kb on - strand at 574.722 kb on - strand at 574.722 kb on - strand at 574.722 kb on - strand at 574.724 kb on + strand at 574.724 kb on + strand at 574.724 kb on + strand at 574.725 kb on - strand at 574.725 kb on - strand at 574.725 kb on - strand at 574.725 kb on - strand at 574.786 kb on + strand at 574.786 kb on + strand at 574.786 kb on + strand at 574.787 kb on - strand at 574.787 kb on - strand at 574.787 kb on - strand at 574.787 kb on - strand at 574.790 kb on + strand at 574.790 kb on + strand at 574.790 kb on + strand at 574.790 kb on + strand at 574.790 kb on + strand at 574.790 kb on + strand at 574.791 kb on - strand at 574.791 kb on - strand at 574.791 kb on - strand at 574.791 kb on - strand at 574.791 kb on - strand at 574.791 kb on - strand at 574.791 kb on - strand at 574.883 kb on + strand, within QEN71_RS02560 at 574.884 kb on - strand, within QEN71_RS02560 at 574.884 kb on - strand, within QEN71_RS02560 at 574.884 kb on - strand, within QEN71_RS02560 at 575.051 kb on + strand, within QEN71_RS02560 at 575.051 kb on + strand, within QEN71_RS02560 at 575.051 kb on + strand, within QEN71_RS02560 at 575.051 kb on + strand, within QEN71_RS02560 at 575.051 kb on + strand, within QEN71_RS02560 at 575.052 kb on - strand, within QEN71_RS02560 at 575.052 kb on - strand, within QEN71_RS02560 at 575.052 kb on - strand, within QEN71_RS02560 at 575.052 kb on - strand, within QEN71_RS02560 at 575.052 kb on - strand, within QEN71_RS02560 at 575.096 kb on + strand, within QEN71_RS02560 at 575.096 kb on + strand, within QEN71_RS02560 at 575.097 kb on - strand, within QEN71_RS02560 at 575.097 kb on - strand, within QEN71_RS02560 at 575.097 kb on - strand, within QEN71_RS02560 at 575.097 kb on - strand, within QEN71_RS02560 at 575.097 kb on - strand, within QEN71_RS02560 at 575.097 kb on - strand, within QEN71_RS02560 at 575.097 kb on - strand, within QEN71_RS02560 at 575.097 kb on - strand, within QEN71_RS02560 at 575.102 kb on + strand, within QEN71_RS02560 at 575.102 kb on + strand, within QEN71_RS02560 at 575.102 kb on + strand, within QEN71_RS02560 at 575.102 kb on + strand, within QEN71_RS02560 at 575.102 kb on + strand, within QEN71_RS02560 at 575.102 kb on + strand, within QEN71_RS02560 at 575.102 kb on + strand, within QEN71_RS02560 at 575.102 kb on + strand, within QEN71_RS02560 at 575.103 kb on - strand, within QEN71_RS02560 at 575.103 kb on - strand, within QEN71_RS02560 at 575.103 kb on - strand, within QEN71_RS02560 at 575.103 kb on - strand, within QEN71_RS02560 at 575.103 kb on - strand, within QEN71_RS02560 at 575.103 kb on - strand, within QEN71_RS02560 at 575.103 kb on - strand, within QEN71_RS02560 at 575.103 kb on - strand, within QEN71_RS02560 at 575.103 kb on - strand, within QEN71_RS02560 at 575.339 kb on + strand, within QEN71_RS02560 at 575.339 kb on + strand, within QEN71_RS02560 at 575.339 kb on + strand, within QEN71_RS02560 at 575.339 kb on + strand, within QEN71_RS02560 at 575.339 kb on + strand, within QEN71_RS02560 at 575.339 kb on + strand, within QEN71_RS02560 at 575.339 kb on + strand, within QEN71_RS02560 at 575.340 kb on - strand, within QEN71_RS02560 at 575.340 kb on - strand, within QEN71_RS02560 at 575.340 kb on - strand, within QEN71_RS02560 at 575.340 kb on - strand, within QEN71_RS02560 at 575.340 kb on - strand, within QEN71_RS02560 at 575.340 kb on - strand, within QEN71_RS02560 at 575.507 kb on + strand at 575.507 kb on + strand at 575.519 kb on + strand at 575.519 kb on + strand at 575.520 kb on - strand at 575.605 kb on + strand at 575.605 kb on + strand at 575.628 kb on - strand at 575.628 kb on - strand at 575.649 kb on + strand at 575.655 kb on + strand at 575.655 kb on + strand at 575.655 kb on + strand at 575.655 kb on + strand at 575.655 kb on + strand at 575.656 kb on - strand at 575.656 kb on - strand at 575.656 kb on - strand at 575.656 kb on - strand at 575.656 kb on - strand at 575.696 kb on + strand at 575.746 kb on - strand, within QEN71_RS02565 at 575.747 kb on + strand, within QEN71_RS02565 at 575.747 kb on + strand, within QEN71_RS02565 at 575.748 kb on - strand, within QEN71_RS02565 at 575.748 kb on - strand, within QEN71_RS02565 at 575.878 kb on + strand, within QEN71_RS02565 at 575.878 kb on + strand, within QEN71_RS02565 at 575.878 kb on + strand, within QEN71_RS02565 at 575.878 kb on + strand, within QEN71_RS02565 at 576.128 kb on + strand, within QEN71_RS02565 at 576.128 kb on + strand, within QEN71_RS02565 at 576.129 kb on - strand, within QEN71_RS02565 at 576.129 kb on - strand, within QEN71_RS02565 at 576.374 kb on + strand at 576.440 kb on + strand at 576.441 kb on - strand at 576.441 kb on - strand at 576.651 kb on + strand, within QEN71_RS02570 at 576.651 kb on + strand, within QEN71_RS02570 at 576.651 kb on + strand, within QEN71_RS02570 at 576.652 kb on - strand, within QEN71_RS02570 at 576.652 kb on - strand, within QEN71_RS02570 at 576.707 kb on + strand, within QEN71_RS02570 at 576.723 kb on + strand, within QEN71_RS02570 at 576.723 kb on + strand, within QEN71_RS02570 at 576.723 kb on + strand, within QEN71_RS02570 at 576.723 kb on + strand, within QEN71_RS02570 at 576.723 kb on + strand, within QEN71_RS02570 at 576.723 kb on + strand, within QEN71_RS02570 at 576.724 kb on - strand, within QEN71_RS02570 at 576.724 kb on - strand, within QEN71_RS02570 at 576.724 kb on - strand, within QEN71_RS02570 at 576.724 kb on - strand, within QEN71_RS02570 at 577.120 kb on + strand, within QEN71_RS02570 at 577.120 kb on + strand, within QEN71_RS02570 at 577.120 kb on + strand, within QEN71_RS02570 at 577.120 kb on + strand, within QEN71_RS02570 at 577.120 kb on + strand, within QEN71_RS02570 at 577.120 kb on + strand, within QEN71_RS02570 at 577.120 kb on + strand, within QEN71_RS02570 at 577.121 kb on - strand, within QEN71_RS02570 at 577.121 kb on - strand, within QEN71_RS02570 at 577.121 kb on - strand, within QEN71_RS02570 at 577.121 kb on - strand, within QEN71_RS02570 at 577.121 kb on - strand, within QEN71_RS02570 at 577.121 kb on - strand, within QEN71_RS02570 at 577.121 kb on - strand, within QEN71_RS02570 at 577.122 kb on + strand, within QEN71_RS02570 at 577.122 kb on + strand, within QEN71_RS02570 at 577.122 kb on + strand, within QEN71_RS02570 at 577.122 kb on + strand, within QEN71_RS02570 at 577.122 kb on + strand, within QEN71_RS02570 at 577.123 kb on - strand, within QEN71_RS02570 at 577.123 kb on - strand, within QEN71_RS02570 at 577.123 kb on - strand, within QEN71_RS02570 at 577.123 kb on - strand, within QEN71_RS02570 at 577.123 kb on - strand, within QEN71_RS02570 at 577.123 kb on - strand, within QEN71_RS02570 at 577.123 kb on - strand, within QEN71_RS02570 at 577.123 kb on - strand, within QEN71_RS02570
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 574,721 + -0.6 574,721 + -0.1 574,721 + -0.3 574,721 + -0.3 574,721 + -0.6 574,722 - +0.2 574,722 - -0.1 574,722 - -1.5 574,722 - -0.2 574,722 - -0.5 574,722 - -0.4 574,722 - +0.1 574,724 + +0.1 574,724 + -0.8 574,724 + +0.6 574,725 - -0.3 574,725 - -0.5 574,725 - -1.8 574,725 - -0.2 574,786 + -1.6 574,786 + +1.0 574,786 + -0.1 574,787 - -1.4 574,787 - +0.2 574,787 - +1.8 574,787 - +0.2 574,790 + +0.2 574,790 + +1.0 574,790 + +1.2 574,790 + +0.2 574,790 + -0.2 574,790 + +1.0 574,791 - -1.0 574,791 - -0.7 574,791 - +0.6 574,791 - -0.9 574,791 - +0.8 574,791 - -1.0 574,791 - -1.8 574,883 + QEN71_RS02560 0.17 +0.2 574,884 - QEN71_RS02560 0.17 +0.3 574,884 - QEN71_RS02560 0.17 -0.1 574,884 - QEN71_RS02560 0.17 +0.9 575,051 + QEN71_RS02560 0.37 -1.4 575,051 + QEN71_RS02560 0.37 -1.5 575,051 + QEN71_RS02560 0.37 -0.5 575,051 + QEN71_RS02560 0.37 +0.5 575,051 + QEN71_RS02560 0.37 -1.1 575,052 - QEN71_RS02560 0.37 +0.6 575,052 - QEN71_RS02560 0.37 -0.6 575,052 - QEN71_RS02560 0.37 +0.0 575,052 - QEN71_RS02560 0.37 +1.9 575,052 - QEN71_RS02560 0.37 +0.3 575,096 + QEN71_RS02560 0.42 -0.3 575,096 + QEN71_RS02560 0.42 -0.4 575,097 - QEN71_RS02560 0.42 +0.2 575,097 - QEN71_RS02560 0.42 -1.0 575,097 - QEN71_RS02560 0.42 +0.6 575,097 - QEN71_RS02560 0.42 +0.4 575,097 - QEN71_RS02560 0.42 -0.7 575,097 - QEN71_RS02560 0.42 -1.6 575,097 - QEN71_RS02560 0.42 +0.4 575,097 - QEN71_RS02560 0.42 -1.0 575,102 + QEN71_RS02560 0.43 -1.0 575,102 + QEN71_RS02560 0.43 -0.0 575,102 + QEN71_RS02560 0.43 +0.3 575,102 + QEN71_RS02560 0.43 +0.8 575,102 + QEN71_RS02560 0.43 +0.6 575,102 + QEN71_RS02560 0.43 -0.6 575,102 + QEN71_RS02560 0.43 +0.7 575,102 + QEN71_RS02560 0.43 +0.0 575,103 - QEN71_RS02560 0.43 -0.2 575,103 - QEN71_RS02560 0.43 -2.0 575,103 - QEN71_RS02560 0.43 -0.4 575,103 - QEN71_RS02560 0.43 -0.6 575,103 - QEN71_RS02560 0.43 -0.0 575,103 - QEN71_RS02560 0.43 +0.7 575,103 - QEN71_RS02560 0.43 +0.1 575,103 - QEN71_RS02560 0.43 +0.2 575,103 - QEN71_RS02560 0.43 +0.4 575,339 + QEN71_RS02560 0.71 -0.1 575,339 + QEN71_RS02560 0.71 +0.1 575,339 + QEN71_RS02560 0.71 +0.2 575,339 + QEN71_RS02560 0.71 +1.0 575,339 + QEN71_RS02560 0.71 +0.4 575,339 + QEN71_RS02560 0.71 +0.2 575,339 + QEN71_RS02560 0.71 +0.0 575,340 - QEN71_RS02560 0.71 -0.3 575,340 - QEN71_RS02560 0.71 -0.2 575,340 - QEN71_RS02560 0.71 -0.4 575,340 - QEN71_RS02560 0.71 +0.7 575,340 - QEN71_RS02560 0.71 +0.2 575,340 - QEN71_RS02560 0.71 -0.8 575,507 + -0.3 575,507 + +0.6 575,519 + +1.0 575,519 + -1.0 575,520 - +0.4 575,605 + +0.6 575,605 + +0.4 575,628 - -0.2 575,628 - -0.6 575,649 + -1.0 575,655 + +0.0 575,655 + -0.1 575,655 + -0.6 575,655 + +0.4 575,655 + +0.6 575,656 - +0.3 575,656 - +0.3 575,656 - +1.2 575,656 - +0.1 575,656 - -0.2 575,696 + -1.0 575,746 - QEN71_RS02565 0.11 +1.7 575,747 + QEN71_RS02565 0.11 +0.0 575,747 + QEN71_RS02565 0.11 -0.3 575,748 - QEN71_RS02565 0.11 -0.2 575,748 - QEN71_RS02565 0.11 -0.4 575,878 + QEN71_RS02565 0.28 -1.0 575,878 + QEN71_RS02565 0.28 -0.6 575,878 + QEN71_RS02565 0.28 -1.0 575,878 + QEN71_RS02565 0.28 -1.3 576,128 + QEN71_RS02565 0.59 -2.2 576,128 + QEN71_RS02565 0.59 +0.9 576,129 - QEN71_RS02565 0.59 +0.3 576,129 - QEN71_RS02565 0.59 -0.2 576,374 + -1.6 576,440 + -1.4 576,441 - -0.2 576,441 - -2.3 576,651 + QEN71_RS02570 0.22 -0.9 576,651 + QEN71_RS02570 0.22 -0.2 576,651 + QEN71_RS02570 0.22 +0.8 576,652 - QEN71_RS02570 0.22 -1.8 576,652 - QEN71_RS02570 0.22 -2.9 576,707 + QEN71_RS02570 0.28 +0.0 576,723 + QEN71_RS02570 0.30 -0.7 576,723 + QEN71_RS02570 0.30 -0.3 576,723 + QEN71_RS02570 0.30 +0.0 576,723 + QEN71_RS02570 0.30 +0.0 576,723 + QEN71_RS02570 0.30 -1.6 576,723 + QEN71_RS02570 0.30 -1.8 576,724 - QEN71_RS02570 0.30 +0.8 576,724 - QEN71_RS02570 0.30 -0.4 576,724 - QEN71_RS02570 0.30 +0.2 576,724 - QEN71_RS02570 0.30 +0.6 577,120 + QEN71_RS02570 0.72 +0.0 577,120 + QEN71_RS02570 0.72 +0.1 577,120 + QEN71_RS02570 0.72 -0.2 577,120 + QEN71_RS02570 0.72 +0.7 577,120 + QEN71_RS02570 0.72 -1.2 577,120 + QEN71_RS02570 0.72 -0.3 577,120 + QEN71_RS02570 0.72 -1.8 577,121 - QEN71_RS02570 0.72 -2.8 577,121 - QEN71_RS02570 0.72 -2.1 577,121 - QEN71_RS02570 0.72 +0.0 577,121 - QEN71_RS02570 0.72 -0.1 577,121 - QEN71_RS02570 0.72 -1.8 577,121 - QEN71_RS02570 0.72 -1.0 577,121 - QEN71_RS02570 0.72 +0.7 577,122 + QEN71_RS02570 0.72 -1.3 577,122 + QEN71_RS02570 0.72 -2.3 577,122 + QEN71_RS02570 0.72 -1.0 577,122 + QEN71_RS02570 0.72 -0.2 577,122 + QEN71_RS02570 0.72 -0.6 577,123 - QEN71_RS02570 0.72 -0.9 577,123 - QEN71_RS02570 0.72 -0.3 577,123 - QEN71_RS02570 0.72 -2.7 577,123 - QEN71_RS02570 0.72 -0.2 577,123 - QEN71_RS02570 0.72 -1.0 577,123 - QEN71_RS02570 0.72 -2.0 577,123 - QEN71_RS02570 0.72 -1.0 577,123 - QEN71_RS02570 0.72 -0.2
Or see this region's nucleotide sequence