Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS23905

Experiment: Motility_inner_sample_with_outgrowth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility_inner_sample_with_outgrowth
5,322,068	+		QEN71_RS23900	0.20	-1.5
5,322,068	+		QEN71_RS23900	0.20	+0.1
5,322,068	+		QEN71_RS23900	0.20	+0.9
5,322,068	+		QEN71_RS23900	0.20	-0.9
5,322,069	-		QEN71_RS23900	0.20	+0.6
5,322,069	-		QEN71_RS23900	0.20	-0.2
5,322,181	-		QEN71_RS23900	0.31	-0.8
5,322,197	+		QEN71_RS23900	0.33	-0.4
5,322,197	+		QEN71_RS23900	0.33	+0.1
5,322,198	-		QEN71_RS23900	0.33	+0.3
5,322,198	-		QEN71_RS23900	0.33	+0.2
5,322,198	-		QEN71_RS23900	0.33	-0.2
5,322,229	+		QEN71_RS23900	0.36	+0.4
5,322,229	+		QEN71_RS23900	0.36	-1.9
5,322,229	+		QEN71_RS23900	0.36	+1.2
5,322,229	+		QEN71_RS23900	0.36	+0.2
5,322,230	-		QEN71_RS23900	0.36	+1.0
5,322,230	-		QEN71_RS23900	0.36	+0.8
5,322,230	-		QEN71_RS23900	0.36	-0.4
5,322,617	+		QEN71_RS23900	0.73	-1.2
5,322,617	+		QEN71_RS23900	0.73	-1.0
5,322,617	+		QEN71_RS23900	0.73	-0.1
5,322,618	-		QEN71_RS23900	0.73	+0.8
5,322,618	-		QEN71_RS23900	0.73	+0.1
5,322,755	+		QEN71_RS23900	0.86	+0.1
5,322,755	+		QEN71_RS23900	0.86	-0.0
5,322,755	+		QEN71_RS23900	0.86	-0.1
5,322,755	+		QEN71_RS23900	0.86	+1.2
5,322,755	+		QEN71_RS23900	0.86	+0.4
5,322,755	+		QEN71_RS23900	0.86	-1.0
5,322,755	+		QEN71_RS23900	0.86	-1.3
5,322,755	+		QEN71_RS23900	0.86	-0.1
5,322,755	+		QEN71_RS23900	0.86	-2.5
5,322,755	+		QEN71_RS23900	0.86	-0.7
5,322,756	-		QEN71_RS23900	0.87	+1.8
5,322,756	-		QEN71_RS23900	0.87	-0.4
5,322,756	-		QEN71_RS23900	0.87	-0.1
5,322,756	-		QEN71_RS23900	0.87	-0.2
5,322,758	+		QEN71_RS23900	0.87	+1.1
5,322,758	+		QEN71_RS23900	0.87	+1.8
5,322,758	+		QEN71_RS23900	0.87	-0.2
5,322,758	+		QEN71_RS23900	0.87	-0.1
5,322,758	+		QEN71_RS23900	0.87	-1.8
5,322,758	+		QEN71_RS23900	0.87	-0.6
5,322,758	+		QEN71_RS23900	0.87	-1.1
5,322,758	+		QEN71_RS23900	0.87	+0.2
5,322,759	-		QEN71_RS23900	0.87	+0.7
5,322,759	-		QEN71_RS23900	0.87	-1.5
5,322,759	-		QEN71_RS23900	0.87	-0.5
5,322,759	-		QEN71_RS23900	0.87	+2.3
5,322,841	+				-2.1
5,322,841	+				-0.6
5,322,841	+				-1.2
5,322,842	-				+1.8
5,322,842	-				-1.6
5,322,888	+				-0.1
5,322,888	+				+0.1
5,322,888	+				-1.1
5,322,888	+				+0.2
5,322,888	+				-0.7
5,322,889	-				+0.4
5,322,941	+				-0.7
5,322,956	+				-1.5
5,322,956	+				+0.6
5,322,956	+				+0.8
5,322,956	+				+0.7
5,322,957	-				+0.4
5,322,957	-				+0.4
5,322,957	-				-0.6
5,323,028	-				+0.3
5,323,028	-				+0.3
5,323,028	-				+0.2
5,323,028	-				+0.6
5,323,028	-				+1.5
5,323,066	+				-0.6
5,323,066	+				+0.2
5,323,067	-				-0.7
5,323,067	-				+0.2
5,323,084	+				-1.7
5,323,084	+				+0.9
5,323,085	-				+0.2
5,323,085	-				+0.4
5,323,085	-				-0.5
5,323,085	-				+0.7
5,323,085	-				+0.4
5,323,085	-				-0.1
5,323,118	-		QEN71_RS23905	0.15	-0.6
5,323,118	-		QEN71_RS23905	0.15	-1.0
5,323,148	+		QEN71_RS23905	0.24	+0.3
5,323,148	+		QEN71_RS23905	0.24	+1.8
5,323,148	+		QEN71_RS23905	0.24	+0.2
5,323,148	+		QEN71_RS23905	0.24	+0.2
5,323,148	+		QEN71_RS23905	0.24	-0.0
5,323,148	+		QEN71_RS23905	0.24	+0.0
5,323,149	-		QEN71_RS23905	0.24	-1.4
5,323,149	-		QEN71_RS23905	0.24	+0.3
5,323,149	-		QEN71_RS23905	0.24	-1.8
5,323,149	-		QEN71_RS23905	0.24	+0.2
5,323,149	-		QEN71_RS23905	0.24	+0.2
5,323,150	+		QEN71_RS23905	0.24	-0.7
5,323,150	+		QEN71_RS23905	0.24	-0.2
5,323,150	+		QEN71_RS23905	0.24	-0.9
5,323,150	+		QEN71_RS23905	0.24	+0.3
5,323,150	+		QEN71_RS23905	0.24	-0.1
5,323,150	+		QEN71_RS23905	0.24	-1.3
5,323,150	+		QEN71_RS23905	0.24	-0.9
5,323,150	+		QEN71_RS23905	0.24	-0.3
5,323,150	+		QEN71_RS23905	0.24	-0.3
5,323,150	+		QEN71_RS23905	0.24	+0.0
5,323,150	+		QEN71_RS23905	0.24	-1.1
5,323,151	-		QEN71_RS23905	0.25	-0.2
5,323,151	-		QEN71_RS23905	0.25	-0.0
5,323,151	-		QEN71_RS23905	0.25	-0.6
5,323,151	-		QEN71_RS23905	0.25	-0.5
5,323,151	-		QEN71_RS23905	0.25	+1.0
5,323,151	-		QEN71_RS23905	0.25	+0.6
5,323,151	-		QEN71_RS23905	0.25	-0.5
5,323,151	-		QEN71_RS23905	0.25	-0.6
5,323,151	-		QEN71_RS23905	0.25	-0.9
5,323,151	-		QEN71_RS23905	0.25	-1.4
5,323,151	-		QEN71_RS23905	0.25	-0.2
5,323,151	-		QEN71_RS23905	0.25	-0.3
5,323,165	+		QEN71_RS23905	0.28	+0.2
5,323,165	+		QEN71_RS23905	0.28	-0.2
5,323,165	+		QEN71_RS23905	0.28	+0.7
5,323,165	+		QEN71_RS23905	0.28	+0.1
5,323,165	+		QEN71_RS23905	0.28	+0.0
5,323,165	+		QEN71_RS23905	0.28	-0.2
5,323,165	+		QEN71_RS23905	0.28	-0.6
5,323,165	+		QEN71_RS23905	0.28	+0.1
5,323,165	+		QEN71_RS23905	0.28	+1.2
5,323,165	+		QEN71_RS23905	0.28	-0.0
5,323,166	-		QEN71_RS23905	0.29	+1.3
5,323,166	-		QEN71_RS23905	0.29	-0.1
5,323,166	-		QEN71_RS23905	0.29	+1.0
5,323,166	-		QEN71_RS23905	0.29	+0.3
5,323,166	-		QEN71_RS23905	0.29	-0.1
5,323,166	-		QEN71_RS23905	0.29	+0.3
5,323,166	-		QEN71_RS23905	0.29	-1.2
5,323,166	-		QEN71_RS23905	0.29	+0.0
5,323,166	-		QEN71_RS23905	0.29	+0.4
5,323,434	+				-0.7
5,323,434	+				-0.2
5,323,434	+				+0.0
5,323,434	+				-1.7
5,323,434	+				-0.3
5,323,434	+				-0.2
5,323,434	+				+0.6
5,323,434	+				+0.5
5,323,435	-				-1.6
5,323,435	-				-2.1
5,323,435	-				+0.2
5,323,435	-				+0.5
5,323,435	-				-0.4
5,323,435	-				+0.1
5,323,435	-				-0.7
5,323,463	+				-0.6
5,323,463	+				+0.6
5,323,463	+				+0.3
5,323,463	+				+0.1
5,323,463	+				+0.7
5,323,463	+				-0.1
5,323,463	+				-0.6
5,323,463	+				+1.1
5,323,463	+				+0.8
5,323,463	+				+0.6
5,323,463	+				+0.9
5,323,463	+				+0.1
5,323,463	+				-1.1
5,323,463	+				-0.2
5,323,463	+				+1.8
5,323,463	+				+0.4
5,323,463	+				+0.3
5,323,464	-				+1.0
5,323,464	-				+0.4
5,323,464	-				+0.0
5,323,464	-				-0.3
5,323,464	-				+0.6
5,323,464	-				+0.1
5,323,464	-				-0.1
5,323,464	-				+0.1
5,323,464	-				-2.2
5,323,464	-				+0.5
5,323,464	-				+0.9
5,323,464	-				-3.2
5,323,464	-				-1.2
5,323,464	-				-0.8
5,323,464	-				+0.2
5,323,464	-				-0.5
5,323,464	-				-0.7
5,323,464	-				+0.5
5,323,464	-				-1.4
5,323,464	-				-0.1
5,323,478	+				-0.8
5,323,478	+				+0.8
5,323,479	-				-0.2
5,323,479	-				+0.9
5,323,479	-				-0.6
5,323,491	+				-0.8
5,323,510	+				-0.8
5,323,510	+				-0.5
5,323,612	+				+0.6
5,323,613	-				-0.9
5,323,613	-				+2.0
5,323,613	-				+0.0
5,323,618	-				-0.2
5,323,618	-				-0.6
5,323,618	-				+0.3
5,323,618	-				+0.6
5,323,618	-				-0.1
5,323,618	-				-1.2
5,323,618	-				+0.4
5,323,618	-				-0.6
5,323,618	-				+0.4
5,323,627	-				+0.0
5,323,693	-		QEN71_RS23910	0.52	+0.6
5,323,693	-		QEN71_RS23910	0.52	-1.1
5,323,709	-		QEN71_RS23910	0.63	-0.1
5,323,709	-		QEN71_RS23910	0.63	-1.9
5,323,709	-		QEN71_RS23910	0.63	+0.6
5,323,709	-		QEN71_RS23910	0.63	-0.7
5,323,767	+				+0.6
5,323,767	+				-0.8
5,323,768	-				+1.1
5,323,768	-				-0.8
5,323,768	-				-0.8
5,323,768	-				-0.9
5,323,768	-				-0.7
5,323,768	-				-1.1
5,323,768	-				+2.1
5,323,787	-				-0.5
5,323,840	+				+0.2
5,323,842	+				-0.4
5,323,842	+				+0.6
5,323,842	+				-0.4
5,323,843	-				-0.8
5,323,843	-				-0.4
5,323,843	-				+0.4
5,323,862	-				-1.1
5,323,916	+				+0.6
5,323,978	+				-1.6
5,323,978	+				-1.2
5,323,978	+				+0.1
5,323,978	+				+0.8
5,323,978	+				-0.1
5,323,979	-				-0.2
5,323,979	-				+1.0
5,323,979	-				-0.5
5,323,989	-				-0.7
5,324,355	+		QEN71_RS23915	0.74	-0.4
5,324,355	+		QEN71_RS23915	0.74	+0.5
5,324,355	+		QEN71_RS23915	0.74	+0.9
5,324,412	+		QEN71_RS23915	0.87	+0.3
5,324,412	+		QEN71_RS23915	0.87	-0.2
5,324,412	+		QEN71_RS23915	0.87	+0.6
5,324,413	-		QEN71_RS23915	0.87	-0.2
5,324,413	-		QEN71_RS23915	0.87	-0.2
5,324,413	-		QEN71_RS23915	0.87	-0.1
5,324,413	-		QEN71_RS23915	0.87	-0.1
5,324,413	-		QEN71_RS23915	0.87	-0.2
5,324,415	+		QEN71_RS23915	0.87	-0.1