Experiment: Motility_inner_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS12820 and QEN71_RS12825 are separated by 119 nucleotides QEN71_RS12825 and QEN71_RS12830 overlap by 2 nucleotides
QEN71_RS12820: QEN71_RS12820 - filamentous hemagglutinin N-terminal domain-containing protein, at 2,867,379 to 2,869,805
_RS12820
QEN71_RS12825: QEN71_RS12825 - hypothetical protein, at 2,869,925 to 2,870,215
_RS12825
QEN71_RS12830: QEN71_RS12830 - filamentous hemagglutinin N-terminal domain-containing protein, at 2,870,214 to 2,872,493
_RS12830
Position (kb)
2869
2870
2871 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2869.037 kb on - strand, within QEN71_RS12820 at 2869.037 kb on - strand, within QEN71_RS12820 at 2869.037 kb on - strand, within QEN71_RS12820 at 2869.037 kb on - strand, within QEN71_RS12820 at 2869.081 kb on - strand, within QEN71_RS12820 at 2869.091 kb on + strand, within QEN71_RS12820 at 2869.092 kb on - strand, within QEN71_RS12820 at 2869.438 kb on + strand, within QEN71_RS12820 at 2869.438 kb on + strand, within QEN71_RS12820 at 2869.438 kb on + strand, within QEN71_RS12820 at 2869.601 kb on + strand at 2869.602 kb on - strand at 2869.602 kb on - strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.805 kb on + strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.806 kb on - strand at 2869.881 kb on + strand at 2870.067 kb on + strand, within QEN71_RS12825 at 2870.067 kb on + strand, within QEN71_RS12825 at 2870.067 kb on + strand, within QEN71_RS12825 at 2870.153 kb on + strand, within QEN71_RS12825 at 2870.153 kb on + strand, within QEN71_RS12825 at 2870.153 kb on + strand, within QEN71_RS12825 at 2870.153 kb on + strand, within QEN71_RS12825 at 2870.153 kb on + strand, within QEN71_RS12825 at 2870.153 kb on + strand, within QEN71_RS12825 at 2870.153 kb on + strand, within QEN71_RS12825 at 2870.154 kb on - strand, within QEN71_RS12825 at 2870.154 kb on - strand, within QEN71_RS12825 at 2870.154 kb on - strand, within QEN71_RS12825 at 2870.154 kb on - strand, within QEN71_RS12825 at 2870.154 kb on - strand, within QEN71_RS12825 at 2870.154 kb on - strand, within QEN71_RS12825 at 2870.236 kb on + strand at 2870.375 kb on - strand at 2870.601 kb on + strand, within QEN71_RS12830 at 2870.601 kb on + strand, within QEN71_RS12830 at 2870.601 kb on + strand, within QEN71_RS12830 at 2870.601 kb on + strand, within QEN71_RS12830 at 2870.602 kb on - strand, within QEN71_RS12830 at 2870.602 kb on - strand, within QEN71_RS12830 at 2870.602 kb on - strand, within QEN71_RS12830 at 2870.774 kb on + strand, within QEN71_RS12830 at 2870.775 kb on - strand, within QEN71_RS12830 at 2871.000 kb on + strand, within QEN71_RS12830 at 2871.001 kb on - strand, within QEN71_RS12830 at 2871.001 kb on - strand, within QEN71_RS12830 at 2871.001 kb on - strand, within QEN71_RS12830 at 2871.001 kb on - strand, within QEN71_RS12830 at 2871.001 kb on - strand, within QEN71_RS12830 at 2871.064 kb on + strand, within QEN71_RS12830 at 2871.064 kb on + strand, within QEN71_RS12830 at 2871.064 kb on + strand, within QEN71_RS12830 at 2871.064 kb on + strand, within QEN71_RS12830 at 2871.064 kb on + strand, within QEN71_RS12830 at 2871.064 kb on + strand, within QEN71_RS12830 at 2871.065 kb on - strand, within QEN71_RS12830 at 2871.065 kb on - strand, within QEN71_RS12830 at 2871.065 kb on - strand, within QEN71_RS12830 at 2871.065 kb on - strand, within QEN71_RS12830 at 2871.065 kb on - strand, within QEN71_RS12830 at 2871.065 kb on - strand, within QEN71_RS12830 at 2871.065 kb on - strand, within QEN71_RS12830 at 2871.065 kb on - strand, within QEN71_RS12830
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample_with_outgrowth remove 2,869,037 - QEN71_RS12820 0.68 +0.5 2,869,037 - QEN71_RS12820 0.68 +0.4 2,869,037 - QEN71_RS12820 0.68 -0.3 2,869,037 - QEN71_RS12820 0.68 -0.5 2,869,081 - QEN71_RS12820 0.70 +0.4 2,869,091 + QEN71_RS12820 0.71 +0.5 2,869,092 - QEN71_RS12820 0.71 -1.3 2,869,438 + QEN71_RS12820 0.85 +0.3 2,869,438 + QEN71_RS12820 0.85 -0.0 2,869,438 + QEN71_RS12820 0.85 +0.1 2,869,601 + -0.5 2,869,602 - -0.7 2,869,602 - +1.8 2,869,805 + -0.9 2,869,805 + -0.2 2,869,805 + -1.1 2,869,805 + +1.4 2,869,805 + +0.6 2,869,805 + -0.1 2,869,805 + +0.4 2,869,805 + -0.4 2,869,805 + +0.2 2,869,805 + +0.8 2,869,805 + -2.4 2,869,805 + +0.4 2,869,805 + -0.9 2,869,805 + -0.5 2,869,806 - -0.4 2,869,806 - -1.1 2,869,806 - +0.4 2,869,806 - +0.1 2,869,806 - -1.1 2,869,806 - +0.5 2,869,806 - -0.6 2,869,806 - +1.4 2,869,806 - -0.9 2,869,806 - +1.4 2,869,806 - -0.7 2,869,806 - +1.4 2,869,806 - +0.2 2,869,806 - -0.5 2,869,806 - +0.3 2,869,806 - -0.5 2,869,881 + -0.6 2,870,067 + QEN71_RS12825 0.49 -0.2 2,870,067 + QEN71_RS12825 0.49 +0.1 2,870,067 + QEN71_RS12825 0.49 -0.6 2,870,153 + QEN71_RS12825 0.78 +0.2 2,870,153 + QEN71_RS12825 0.78 -0.5 2,870,153 + QEN71_RS12825 0.78 +0.8 2,870,153 + QEN71_RS12825 0.78 +0.2 2,870,153 + QEN71_RS12825 0.78 -0.9 2,870,153 + QEN71_RS12825 0.78 -1.5 2,870,153 + QEN71_RS12825 0.78 +0.6 2,870,154 - QEN71_RS12825 0.79 -2.4 2,870,154 - QEN71_RS12825 0.79 -0.3 2,870,154 - QEN71_RS12825 0.79 -0.5 2,870,154 - QEN71_RS12825 0.79 +0.4 2,870,154 - QEN71_RS12825 0.79 -0.3 2,870,154 - QEN71_RS12825 0.79 -0.4 2,870,236 + -0.7 2,870,375 - -0.2 2,870,601 + QEN71_RS12830 0.17 -0.7 2,870,601 + QEN71_RS12830 0.17 +0.9 2,870,601 + QEN71_RS12830 0.17 +0.6 2,870,601 + QEN71_RS12830 0.17 +0.7 2,870,602 - QEN71_RS12830 0.17 -0.9 2,870,602 - QEN71_RS12830 0.17 -0.3 2,870,602 - QEN71_RS12830 0.17 -1.7 2,870,774 + QEN71_RS12830 0.25 -0.7 2,870,775 - QEN71_RS12830 0.25 +0.7 2,871,000 + QEN71_RS12830 0.34 -0.6 2,871,001 - QEN71_RS12830 0.35 +0.0 2,871,001 - QEN71_RS12830 0.35 -0.1 2,871,001 - QEN71_RS12830 0.35 +0.0 2,871,001 - QEN71_RS12830 0.35 +0.7 2,871,001 - QEN71_RS12830 0.35 +0.3 2,871,064 + QEN71_RS12830 0.37 +0.2 2,871,064 + QEN71_RS12830 0.37 -0.1 2,871,064 + QEN71_RS12830 0.37 -0.1 2,871,064 + QEN71_RS12830 0.37 -1.7 2,871,064 + QEN71_RS12830 0.37 +0.5 2,871,064 + QEN71_RS12830 0.37 -0.9 2,871,065 - QEN71_RS12830 0.37 +0.8 2,871,065 - QEN71_RS12830 0.37 +0.3 2,871,065 - QEN71_RS12830 0.37 +0.3 2,871,065 - QEN71_RS12830 0.37 +0.5 2,871,065 - QEN71_RS12830 0.37 -0.6 2,871,065 - QEN71_RS12830 0.37 +1.1 2,871,065 - QEN71_RS12830 0.37 -0.1 2,871,065 - QEN71_RS12830 0.37 -0.5
Or see this region's nucleotide sequence