Experiment: Motility_inner_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS06830 and QEN71_RS06835 are separated by 131 nucleotides
QEN71_RS06830: QEN71_RS06830 - ParB/RepB/Spo0J family partition protein, at 1,510,963 to 1,513,209
_RS06830
QEN71_RS06835: QEN71_RS06835 - DUF932 domain-containing protein, at 1,513,341 to 1,514,174
_RS06835
Position (kb)
1513
1514
1515 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1512.368 kb on + strand, within QEN71_RS06830 at 1512.369 kb on - strand, within QEN71_RS06830 at 1512.369 kb on - strand, within QEN71_RS06830 at 1512.369 kb on - strand, within QEN71_RS06830 at 1512.428 kb on + strand, within QEN71_RS06830 at 1512.429 kb on - strand, within QEN71_RS06830 at 1512.546 kb on + strand, within QEN71_RS06830 at 1512.546 kb on + strand, within QEN71_RS06830 at 1512.546 kb on + strand, within QEN71_RS06830 at 1512.546 kb on + strand, within QEN71_RS06830 at 1512.669 kb on + strand, within QEN71_RS06830 at 1512.707 kb on + strand, within QEN71_RS06830 at 1513.035 kb on + strand at 1513.070 kb on + strand at 1513.071 kb on - strand at 1513.071 kb on - strand at 1513.224 kb on - strand at 1513.342 kb on + strand at 1513.343 kb on - strand at 1513.479 kb on + strand, within QEN71_RS06835 at 1513.480 kb on - strand, within QEN71_RS06835 at 1513.480 kb on - strand, within QEN71_RS06835 at 1513.499 kb on + strand, within QEN71_RS06835 at 1513.793 kb on + strand, within QEN71_RS06835 at 1513.816 kb on + strand, within QEN71_RS06835 at 1513.817 kb on - strand, within QEN71_RS06835 at 1513.830 kb on + strand, within QEN71_RS06835 at 1513.830 kb on + strand, within QEN71_RS06835 at 1513.831 kb on - strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.035 kb on + strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.036 kb on - strand, within QEN71_RS06835 at 1514.041 kb on + strand, within QEN71_RS06835 at 1514.041 kb on + strand, within QEN71_RS06835 at 1514.042 kb on - strand, within QEN71_RS06835 at 1514.602 kb on + strand at 1514.603 kb on - strand at 1514.603 kb on - strand at 1514.660 kb on + strand at 1514.660 kb on + strand at 1514.660 kb on + strand at 1514.660 kb on + strand at 1514.661 kb on - strand at 1514.661 kb on - strand at 1514.661 kb on - strand at 1514.661 kb on - strand at 1514.661 kb on - strand at 1514.661 kb on - strand at 1514.667 kb on + strand at 1514.668 kb on - strand at 1514.668 kb on - strand at 1514.668 kb on - strand at 1514.668 kb on - strand at 1514.668 kb on - strand at 1514.668 kb on - strand at 1514.741 kb on + strand at 1514.753 kb on - strand at 1514.768 kb on + strand at 1514.768 kb on + strand at 1514.768 kb on + strand at 1514.768 kb on + strand at 1514.768 kb on + strand at 1514.769 kb on - strand at 1514.835 kb on + strand at 1514.856 kb on + strand at 1514.857 kb on - strand at 1514.913 kb on + strand at 1514.913 kb on + strand at 1514.913 kb on + strand at 1514.995 kb on - strand at 1515.159 kb on + strand at 1515.160 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample_with_outgrowth remove 1,512,368 + QEN71_RS06830 0.63 -0.2 1,512,369 - QEN71_RS06830 0.63 +0.9 1,512,369 - QEN71_RS06830 0.63 -0.3 1,512,369 - QEN71_RS06830 0.63 -1.7 1,512,428 + QEN71_RS06830 0.65 +0.6 1,512,429 - QEN71_RS06830 0.65 +1.1 1,512,546 + QEN71_RS06830 0.70 -0.3 1,512,546 + QEN71_RS06830 0.70 -0.9 1,512,546 + QEN71_RS06830 0.70 -0.2 1,512,546 + QEN71_RS06830 0.70 -2.3 1,512,669 + QEN71_RS06830 0.76 -0.5 1,512,707 + QEN71_RS06830 0.78 -0.3 1,513,035 + +0.6 1,513,070 + -0.3 1,513,071 - +1.3 1,513,071 - +0.2 1,513,224 - -1.3 1,513,342 + +0.1 1,513,343 - +0.5 1,513,479 + QEN71_RS06835 0.17 -1.6 1,513,480 - QEN71_RS06835 0.17 -0.6 1,513,480 - QEN71_RS06835 0.17 +0.9 1,513,499 + QEN71_RS06835 0.19 +0.2 1,513,793 + QEN71_RS06835 0.54 -0.7 1,513,816 + QEN71_RS06835 0.57 -1.4 1,513,817 - QEN71_RS06835 0.57 -0.3 1,513,830 + QEN71_RS06835 0.59 +0.2 1,513,830 + QEN71_RS06835 0.59 -0.5 1,513,831 - QEN71_RS06835 0.59 -0.3 1,514,035 + QEN71_RS06835 0.83 +0.5 1,514,035 + QEN71_RS06835 0.83 +0.6 1,514,035 + QEN71_RS06835 0.83 -0.3 1,514,035 + QEN71_RS06835 0.83 -1.6 1,514,035 + QEN71_RS06835 0.83 -0.1 1,514,035 + QEN71_RS06835 0.83 +1.4 1,514,035 + QEN71_RS06835 0.83 +0.1 1,514,035 + QEN71_RS06835 0.83 -0.6 1,514,035 + QEN71_RS06835 0.83 +0.2 1,514,035 + QEN71_RS06835 0.83 -0.1 1,514,035 + QEN71_RS06835 0.83 +0.6 1,514,035 + QEN71_RS06835 0.83 +0.4 1,514,035 + QEN71_RS06835 0.83 -0.1 1,514,035 + QEN71_RS06835 0.83 +0.7 1,514,035 + QEN71_RS06835 0.83 +0.8 1,514,035 + QEN71_RS06835 0.83 +0.4 1,514,035 + QEN71_RS06835 0.83 -0.2 1,514,035 + QEN71_RS06835 0.83 +1.0 1,514,035 + QEN71_RS06835 0.83 -0.3 1,514,035 + QEN71_RS06835 0.83 -0.6 1,514,036 - QEN71_RS06835 0.83 +0.1 1,514,036 - QEN71_RS06835 0.83 +0.5 1,514,036 - QEN71_RS06835 0.83 +1.1 1,514,036 - QEN71_RS06835 0.83 -0.3 1,514,036 - QEN71_RS06835 0.83 +0.4 1,514,036 - QEN71_RS06835 0.83 +0.9 1,514,036 - QEN71_RS06835 0.83 +0.3 1,514,036 - QEN71_RS06835 0.83 -0.1 1,514,036 - QEN71_RS06835 0.83 +1.7 1,514,036 - QEN71_RS06835 0.83 -0.8 1,514,036 - QEN71_RS06835 0.83 -0.8 1,514,036 - QEN71_RS06835 0.83 +1.5 1,514,036 - QEN71_RS06835 0.83 -0.6 1,514,036 - QEN71_RS06835 0.83 -0.9 1,514,036 - QEN71_RS06835 0.83 -0.1 1,514,036 - QEN71_RS06835 0.83 -0.6 1,514,036 - QEN71_RS06835 0.83 -0.1 1,514,041 + QEN71_RS06835 0.84 -0.2 1,514,041 + QEN71_RS06835 0.84 -0.1 1,514,042 - QEN71_RS06835 0.84 +0.2 1,514,602 + -1.6 1,514,603 - -0.3 1,514,603 - +0.5 1,514,660 + +0.5 1,514,660 + -1.0 1,514,660 + -0.3 1,514,660 + +1.0 1,514,661 - +0.9 1,514,661 - -0.1 1,514,661 - -1.3 1,514,661 - -0.4 1,514,661 - +0.2 1,514,661 - -0.8 1,514,667 + +0.2 1,514,668 - +0.7 1,514,668 - -0.8 1,514,668 - -0.1 1,514,668 - +0.5 1,514,668 - +0.3 1,514,668 - -0.6 1,514,741 + -0.8 1,514,753 - +2.4 1,514,768 + -0.8 1,514,768 + -2.1 1,514,768 + +1.4 1,514,768 + +0.3 1,514,768 + -0.8 1,514,769 - +0.5 1,514,835 + -0.2 1,514,856 + -0.4 1,514,857 - +0.7 1,514,913 + +0.7 1,514,913 + -0.5 1,514,913 + -0.3 1,514,995 - -1.4 1,515,159 + +0.4 1,515,160 - +0.2
Or see this region's nucleotide sequence