Experiment: Motility_inner_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS01310 and QEN71_RS01315 are separated by 98 nucleotides QEN71_RS01315 and QEN71_RS01320 are separated by 73 nucleotides QEN71_RS01320 and QEN71_RS01325 are separated by 13 nucleotides
QEN71_RS01310: QEN71_RS01310 - transcriptional regulator GcvA, at 294,427 to 295,431
_RS01310
QEN71_RS01315: QEN71_RS01315 - DUF2917 domain-containing protein, at 295,530 to 295,856
_RS01315
QEN71_RS01320: QEN71_RS01320 - lipoyl(octanoyl) transferase LipB, at 295,930 to 296,697
_RS01320
QEN71_RS01325: QEN71_RS01325 - lipoyl synthase, at 296,711 to 297,712
_RS01325
Position (kb) 295
296
297 Strain fitness (log2 ratio) -2
-1
0
1 at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.337 kb on + strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.338 kb on - strand at 295.414 kb on + strand at 295.414 kb on + strand at 295.414 kb on + strand at 295.415 kb on - strand at 295.449 kb on - strand at 295.475 kb on - strand at 295.499 kb on + strand at 295.547 kb on + strand at 295.547 kb on + strand at 295.548 kb on - strand at 295.568 kb on - strand, within QEN71_RS01315 at 295.665 kb on + strand, within QEN71_RS01315 at 295.665 kb on + strand, within QEN71_RS01315 at 295.666 kb on - strand, within QEN71_RS01315 at 295.877 kb on + strand at 295.877 kb on + strand at 295.877 kb on + strand at 295.877 kb on + strand at 295.877 kb on + strand at 295.877 kb on + strand at 295.877 kb on + strand at 295.877 kb on + strand at 295.877 kb on + strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand at 295.878 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample_with_outgrowth remove 295,337 + -0.9 295,337 + +1.3 295,337 + -0.2 295,337 + +0.3 295,337 + +0.3 295,337 + -0.3 295,337 + +0.2 295,337 + -0.6 295,337 + -0.5 295,337 + -0.5 295,337 + -0.0 295,337 + -0.2 295,338 - +1.4 295,338 - -0.1 295,338 - -0.7 295,338 - +1.3 295,338 - -0.8 295,338 - +0.3 295,338 - +0.7 295,338 - +0.4 295,338 - -0.3 295,338 - -2.2 295,338 - +0.3 295,338 - +0.4 295,338 - +0.8 295,414 + +0.5 295,414 + -0.1 295,414 + +0.2 295,415 - +0.3 295,449 - -0.1 295,475 - +0.1 295,499 + -0.6 295,547 + +0.9 295,547 + +0.1 295,548 - +0.5 295,568 - QEN71_RS01315 0.12 -0.1 295,665 + QEN71_RS01315 0.41 -0.7 295,665 + QEN71_RS01315 0.41 +0.8 295,666 - QEN71_RS01315 0.42 +1.0 295,877 + -0.5 295,877 + +0.2 295,877 + +0.3 295,877 + +0.8 295,877 + -0.7 295,877 + -1.0 295,877 + +0.3 295,877 + +0.6 295,877 + -0.9 295,878 - +0.8 295,878 - -0.5 295,878 - -0.7 295,878 - +0.2 295,878 - +1.3 295,878 - -1.7 295,878 - +0.2 295,878 - -0.3 295,878 - -0.4 295,878 - +0.1 295,878 - +0.1 295,878 - +0.2
Or see this region's nucleotide sequence