Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17235

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
3,788,474	+		LRK53_RS17225	0.84	-1.1
3,788,475	-		LRK53_RS17225	0.84	+0.5
3,788,702	+				+0.1
3,788,702	+				-0.2
3,788,702	+				-1.6
3,788,702	+				-0.3
3,788,703	-				-0.6
3,788,703	-				+0.8
3,788,703	-				+0.4
3,788,825	+				-0.9
3,788,825	+				+1.6
3,788,825	+				+0.0
3,788,825	+				+0.8
3,788,826	-				-1.0
3,789,001	+				-2.1
3,789,001	+				-0.9
3,789,001	+				+1.6
3,789,001	+				+1.2
3,789,001	+				-1.3
3,789,001	+				+0.9
3,789,001	+				+0.0
3,789,001	+				-2.6
3,789,001	+				-1.8
3,789,001	+				-1.2
3,789,001	+				-0.3
3,789,001	+				-0.8
3,789,001	+				-1.1
3,789,001	+				-0.9
3,789,001	+				-0.7
3,789,001	+				-0.3
3,789,001	+				-0.1
3,789,001	+				-1.1
3,789,001	+				-1.4
3,789,001	+				-1.0
3,789,001	+				-1.0
3,789,001	+				-0.5
3,789,001	+				+0.6
3,789,001	+				-1.9
3,789,002	-				-1.4
3,789,002	-				+0.1
3,789,002	-				+0.7
3,789,002	-				-1.9
3,789,002	-				+0.3
3,789,002	-				-2.8
3,789,002	-				+1.3
3,789,002	-				-0.5
3,789,002	-				-1.7
3,789,002	-				-1.2
3,789,002	-				-0.5
3,789,002	-				-1.8
3,789,002	-				+0.3
3,789,002	-				+0.9
3,789,002	-				-1.4
3,789,002	-				+1.7
3,789,002	-				+1.0
3,789,002	-				-0.5
3,789,002	-				-1.6
3,789,002	-				-0.3
3,789,002	-				-0.6
3,789,002	-				-0.1
3,789,005	+				-1.3
3,789,005	+				+0.3
3,789,005	+				-1.1
3,789,006	-				+1.4
3,789,020	+				-0.3
3,789,020	+				+2.0
3,789,020	+				-0.8
3,789,020	+				-0.6
3,789,020	+				+0.5
3,789,020	+				-0.5
3,789,020	+				-2.5
3,789,020	+				+0.7
3,789,020	+				-1.7
3,789,020	+				+0.2
3,789,021	-				-0.9
3,789,021	-				-1.1
3,789,021	-				-1.9
3,789,113	+		LRK53_RS17230	0.26	+0.2
3,789,113	+		LRK53_RS17230	0.26	+0.9
3,789,113	+		LRK53_RS17230	0.26	-1.4
3,789,113	+		LRK53_RS17230	0.26	+1.4
3,789,113	+		LRK53_RS17230	0.26	+0.0
3,789,113	+		LRK53_RS17230	0.26	-1.2
3,789,113	+		LRK53_RS17230	0.26	-2.2
3,789,113	+		LRK53_RS17230	0.26	-2.3
3,789,113	+		LRK53_RS17230	0.26	-2.1
3,789,113	+		LRK53_RS17230	0.26	+1.1
3,789,113	+		LRK53_RS17230	0.26	-0.6
3,789,113	+		LRK53_RS17230	0.26	+1.6
3,789,113	+		LRK53_RS17230	0.26	-0.0
3,789,113	+		LRK53_RS17230	0.26	-1.7
3,789,113	+		LRK53_RS17230	0.26	-1.8
3,789,113	+		LRK53_RS17230	0.26	+1.3
3,789,113	+		LRK53_RS17230	0.26	-0.8
3,789,113	+		LRK53_RS17230	0.26	+0.9
3,789,113	+		LRK53_RS17230	0.26	-1.0
3,789,113	+		LRK53_RS17230	0.26	-1.6
3,789,114	-		LRK53_RS17230	0.26	+1.1
3,789,114	-		LRK53_RS17230	0.26	-1.7
3,789,114	-		LRK53_RS17230	0.26	-1.8
3,789,114	-		LRK53_RS17230	0.26	+0.7
3,789,114	-		LRK53_RS17230	0.26	+0.1
3,789,114	-		LRK53_RS17230	0.26	-0.9
3,789,114	-		LRK53_RS17230	0.26	-3.5
3,789,114	-		LRK53_RS17230	0.26	-1.4
3,789,114	-		LRK53_RS17230	0.26	-0.7
3,789,114	-		LRK53_RS17230	0.26	-1.7
3,789,114	-		LRK53_RS17230	0.26	-0.1
3,789,114	-		LRK53_RS17230	0.26	-1.4
3,789,114	-		LRK53_RS17230	0.26	-2.0
3,789,114	-		LRK53_RS17230	0.26	+1.1
3,789,114	-		LRK53_RS17230	0.26	-0.1
3,789,359	+		LRK53_RS17230	0.84	-0.1
3,789,359	+		LRK53_RS17230	0.84	-0.2
3,789,359	+		LRK53_RS17230	0.84	+0.1
3,789,359	+		LRK53_RS17230	0.84	-0.9
3,789,359	+		LRK53_RS17230	0.84	+0.5
3,789,359	+		LRK53_RS17230	0.84	-0.7
3,789,359	+		LRK53_RS17230	0.84	-1.0
3,789,360	-		LRK53_RS17230	0.84	+0.5
3,789,360	-		LRK53_RS17230	0.84	+2.5
3,789,360	-		LRK53_RS17230	0.84	-1.0
3,789,360	-		LRK53_RS17230	0.84	-2.5
3,789,360	-		LRK53_RS17230	0.84	-0.1
3,789,360	-		LRK53_RS17230	0.84	-0.9
3,789,432	+				-0.9
3,789,432	+				-2.4
3,789,432	+				+0.2
3,789,432	+				+0.3
3,789,433	-				+0.5
3,789,433	-				-0.7
3,789,463	+				+2.2
3,789,464	-				-2.5
3,789,513	+		LRK53_RS17235	0.21	+0.7
3,789,513	+		LRK53_RS17235	0.21	-2.3
3,789,513	+		LRK53_RS17235	0.21	-0.9
3,789,513	+		LRK53_RS17235	0.21	+0.5
3,789,513	+		LRK53_RS17235	0.21	-0.3
3,789,513	+		LRK53_RS17235	0.21	-1.2
3,789,513	+		LRK53_RS17235	0.21	-1.2
3,789,513	+		LRK53_RS17235	0.21	-2.8
3,789,514	-		LRK53_RS17235	0.21	-0.4
3,789,514	-		LRK53_RS17235	0.21	+0.2
3,789,514	-		LRK53_RS17235	0.21	+1.6
3,789,582	+		LRK53_RS17235	0.38	+0.9
3,789,582	+		LRK53_RS17235	0.38	-0.5
3,789,582	+		LRK53_RS17235	0.38	-1.5
3,789,582	+		LRK53_RS17235	0.38	-0.5
3,789,582	+		LRK53_RS17235	0.38	-0.3
3,789,582	+		LRK53_RS17235	0.38	+0.2
3,789,582	+		LRK53_RS17235	0.38	-0.6
3,789,582	+		LRK53_RS17235	0.38	-1.3
3,789,582	+		LRK53_RS17235	0.38	-1.5
3,789,583	-		LRK53_RS17235	0.39	-2.4
3,789,583	-		LRK53_RS17235	0.39	+1.6
3,789,583	-		LRK53_RS17235	0.39	-1.0
3,789,583	-		LRK53_RS17235	0.39	-3.1
3,789,657	+		LRK53_RS17235	0.58	-1.4
3,789,657	+		LRK53_RS17235	0.58	-1.5
3,789,657	+		LRK53_RS17235	0.58	-1.1
3,789,657	+		LRK53_RS17235	0.58	+0.3
3,789,657	+		LRK53_RS17235	0.58	-2.2
3,789,657	+		LRK53_RS17235	0.58	-1.5
3,789,657	+		LRK53_RS17235	0.58	-0.1
3,789,657	+		LRK53_RS17235	0.58	-0.1
3,789,657	+		LRK53_RS17235	0.58	-0.7
3,789,657	+		LRK53_RS17235	0.58	-0.3
3,789,657	+		LRK53_RS17235	0.58	-1.1
3,789,657	+		LRK53_RS17235	0.58	-0.7
3,789,657	+		LRK53_RS17235	0.58	-2.9
3,789,657	+		LRK53_RS17235	0.58	-0.4
3,789,657	+		LRK53_RS17235	0.58	-1.2
3,789,657	+		LRK53_RS17235	0.58	-0.8
3,789,657	+		LRK53_RS17235	0.58	-0.6
3,789,657	+		LRK53_RS17235	0.58	-0.5
3,789,657	+		LRK53_RS17235	0.58	-0.7
3,789,657	+		LRK53_RS17235	0.58	+0.4
3,789,657	+		LRK53_RS17235	0.58	-0.8
3,789,657	+		LRK53_RS17235	0.58	-0.8
3,789,657	+		LRK53_RS17235	0.58	+0.9
3,789,657	+		LRK53_RS17235	0.58	-0.9
3,789,657	+		LRK53_RS17235	0.58	-0.3
3,789,657	+		LRK53_RS17235	0.58	-0.8
3,789,657	+		LRK53_RS17235	0.58	-0.4
3,789,657	+		LRK53_RS17235	0.58	+0.1
3,789,657	+		LRK53_RS17235	0.58	+0.1
3,789,657	+		LRK53_RS17235	0.58	+0.7
3,789,657	+		LRK53_RS17235	0.58	+0.5
3,789,657	+		LRK53_RS17235	0.58	-0.2
3,789,657	+		LRK53_RS17235	0.58	-1.4
3,789,658	-		LRK53_RS17235	0.58	-1.4
3,789,658	-		LRK53_RS17235	0.58	-0.7
3,789,658	-		LRK53_RS17235	0.58	-0.3
3,789,658	-		LRK53_RS17235	0.58	-1.2
3,789,658	-		LRK53_RS17235	0.58	-0.2
3,789,658	-		LRK53_RS17235	0.58	-1.7
3,789,658	-		LRK53_RS17235	0.58	+0.5
3,789,658	-		LRK53_RS17235	0.58	-0.1
3,789,658	-		LRK53_RS17235	0.58	-0.5
3,789,658	-		LRK53_RS17235	0.58	-1.0
3,789,658	-		LRK53_RS17235	0.58	-1.8
3,789,658	-		LRK53_RS17235	0.58	-0.5
3,789,658	-		LRK53_RS17235	0.58	-0.5
3,789,658	-		LRK53_RS17235	0.58	-2.1
3,789,658	-		LRK53_RS17235	0.58	-1.0
3,789,658	-		LRK53_RS17235	0.58	-1.2
3,789,658	-		LRK53_RS17235	0.58	+0.3
3,789,658	-		LRK53_RS17235	0.58	+0.3
3,789,658	-		LRK53_RS17235	0.58	-0.4
3,789,658	-		LRK53_RS17235	0.58	-0.1
3,789,658	-		LRK53_RS17235	0.58	-3.6
3,789,777	+		LRK53_RS17235	0.88	-0.3
3,789,777	+		LRK53_RS17235	0.88	-0.7
3,789,777	+		LRK53_RS17235	0.88	-0.7
3,789,777	+		LRK53_RS17235	0.88	-2.1
3,789,778	-		LRK53_RS17235	0.88	-2.4
3,789,778	-		LRK53_RS17235	0.88	-2.0
3,789,778	-		LRK53_RS17235	0.88	-0.7
3,789,778	-		LRK53_RS17235	0.88	-0.3
3,789,778	-		LRK53_RS17235	0.88	+1.5
3,789,778	-		LRK53_RS17235	0.88	-0.5
3,789,778	-		LRK53_RS17235	0.88	-1.1
3,789,778	-		LRK53_RS17235	0.88	+0.5
3,790,104	+		LRK53_RS17240	0.37	-0.3
3,790,104	+		LRK53_RS17240	0.37	-1.5
3,790,105	-		LRK53_RS17240	0.37	-0.1
3,790,105	-		LRK53_RS17240	0.37	-0.8
3,790,105	-		LRK53_RS17240	0.37	+1.0
3,790,105	-		LRK53_RS17240	0.37	-0.5
3,790,200	+		LRK53_RS17240	0.50	+0.4
3,790,201	-		LRK53_RS17240	0.50	-1.0
3,790,201	-		LRK53_RS17240	0.50	-0.5
3,790,266	+		LRK53_RS17240	0.59	+0.1
3,790,464	+		LRK53_RS17240	0.85	-0.8
3,790,464	+		LRK53_RS17240	0.85	-2.4
3,790,464	+		LRK53_RS17240	0.85	-0.7
3,790,464	+		LRK53_RS17240	0.85	+0.3
3,790,464	+		LRK53_RS17240	0.85	-0.1
3,790,464	+		LRK53_RS17240	0.85	+1.2
3,790,464	+		LRK53_RS17240	0.85	-0.5
3,790,464	+		LRK53_RS17240	0.85	-0.6
3,790,464	+		LRK53_RS17240	0.85	-0.7
3,790,464	+		LRK53_RS17240	0.85	+1.4
3,790,464	+		LRK53_RS17240	0.85	-3.1
3,790,464	+		LRK53_RS17240	0.85	-0.0
3,790,464	+		LRK53_RS17240	0.85	-1.7
3,790,464	+		LRK53_RS17240	0.85	-0.5
3,790,464	+		LRK53_RS17240	0.85	-0.7
3,790,464	+		LRK53_RS17240	0.85	+0.0
3,790,464	+		LRK53_RS17240	0.85	-1.6
3,790,464	+		LRK53_RS17240	0.85	-1.3
3,790,464	+		LRK53_RS17240	0.85	-0.4
3,790,464	+		LRK53_RS17240	0.85	-1.2
3,790,464	+		LRK53_RS17240	0.85	+0.4
3,790,464	+		LRK53_RS17240	0.85	-1.0
3,790,464	+		LRK53_RS17240	0.85	+0.2
3,790,464	+		LRK53_RS17240	0.85	-1.9
3,790,464	+		LRK53_RS17240	0.85	-0.8
3,790,464	+		LRK53_RS17240	0.85	-1.1
3,790,464	+		LRK53_RS17240	0.85	+0.5
3,790,464	+		LRK53_RS17240	0.85	-0.2
3,790,464	+		LRK53_RS17240	0.85	-1.1
3,790,464	+		LRK53_RS17240	0.85	+0.7
3,790,464	+		LRK53_RS17240	0.85	-1.3
3,790,464	+		LRK53_RS17240	0.85	-0.9
3,790,464	+		LRK53_RS17240	0.85	-2.6
3,790,465	-		LRK53_RS17240	0.85	+0.7
3,790,465	-		LRK53_RS17240	0.85	-0.7
3,790,465	-		LRK53_RS17240	0.85	+0.3
3,790,465	-		LRK53_RS17240	0.85	+0.3
3,790,465	-		LRK53_RS17240	0.85	-0.0
3,790,465	-		LRK53_RS17240	0.85	-0.7
3,790,465	-		LRK53_RS17240	0.85	-0.7
3,790,465	-		LRK53_RS17240	0.85	-0.9
3,790,465	-		LRK53_RS17240	0.85	+0.3
3,790,465	-		LRK53_RS17240	0.85	-1.1
3,790,465	-		LRK53_RS17240	0.85	-2.7
3,790,465	-		LRK53_RS17240	0.85	-1.9
3,790,465	-		LRK53_RS17240	0.85	-0.5
3,790,465	-		LRK53_RS17240	0.85	-0.5
3,790,465	-		LRK53_RS17240	0.85	-0.0
3,790,465	-		LRK53_RS17240	0.85	+0.7
3,790,465	-		LRK53_RS17240	0.85	-2.2
3,790,503	+				-1.7
3,790,509	+				-0.3
3,790,509	+				-2.4
3,790,509	+				-1.4
3,790,509	+				+0.1
3,790,509	+				-0.3
3,790,510	-				-0.4
3,790,510	-				-1.5
3,790,628	-				-1.7
3,790,628	-				-0.0
3,790,796	+				+0.3
3,790,796	+				+0.6
3,790,796	+				-1.0
3,790,796	+				-0.5
3,790,797	-				-2.0
3,790,797	-				+0.7