Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17160

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
3,773,045	+		LRK53_RS17150	0.63	+0.1
3,773,045	+		LRK53_RS17150	0.63	-0.4
3,773,045	+		LRK53_RS17150	0.63	+2.2
3,773,045	+		LRK53_RS17150	0.63	-0.4
3,773,045	+		LRK53_RS17150	0.63	-0.3
3,773,045	+		LRK53_RS17150	0.63	-0.3
3,773,045	+		LRK53_RS17150	0.63	+1.2
3,773,046	-		LRK53_RS17150	0.63	+0.7
3,773,046	-		LRK53_RS17150	0.63	-2.2
3,773,046	-		LRK53_RS17150	0.63	+1.9
3,773,046	-		LRK53_RS17150	0.63	+0.7
3,773,046	-		LRK53_RS17150	0.63	-1.1
3,773,046	-		LRK53_RS17150	0.63	-1.4
3,773,046	-		LRK53_RS17150	0.63	-0.8
3,773,579	+		LRK53_RS17155	0.60	+0.5
3,773,579	+		LRK53_RS17155	0.60	-0.6
3,773,579	+		LRK53_RS17155	0.60	-2.4
3,773,579	+		LRK53_RS17155	0.60	+0.1
3,773,579	+		LRK53_RS17155	0.60	-1.1
3,773,579	+		LRK53_RS17155	0.60	-1.2
3,773,579	+		LRK53_RS17155	0.60	-0.6
3,773,579	+		LRK53_RS17155	0.60	-0.5
3,773,579	+		LRK53_RS17155	0.60	+0.6
3,773,579	+		LRK53_RS17155	0.60	-1.6
3,773,579	+		LRK53_RS17155	0.60	+0.3
3,773,580	-		LRK53_RS17155	0.61	-0.2
3,773,580	-		LRK53_RS17155	0.61	-0.9
3,773,580	-		LRK53_RS17155	0.61	+1.6
3,773,580	-		LRK53_RS17155	0.61	+0.7
3,773,580	-		LRK53_RS17155	0.61	+0.6
3,773,580	-		LRK53_RS17155	0.61	-0.1
3,773,580	-		LRK53_RS17155	0.61	-0.9
3,773,580	-		LRK53_RS17155	0.61	-0.6
3,773,614	+		LRK53_RS17155	0.68	+0.1
3,773,614	+		LRK53_RS17155	0.68	-2.0
3,773,614	+		LRK53_RS17155	0.68	+0.1
3,773,614	+		LRK53_RS17155	0.68	-0.5
3,773,614	+		LRK53_RS17155	0.68	-0.9
3,773,614	+		LRK53_RS17155	0.68	+0.3
3,773,614	+		LRK53_RS17155	0.68	-0.8
3,773,614	+		LRK53_RS17155	0.68	-3.5
3,773,614	+		LRK53_RS17155	0.68	-0.5
3,773,614	+		LRK53_RS17155	0.68	-1.9
3,773,614	+		LRK53_RS17155	0.68	-1.6
3,773,614	+		LRK53_RS17155	0.68	-0.7
3,773,614	+		LRK53_RS17155	0.68	-0.3
3,773,615	-		LRK53_RS17155	0.68	-0.0
3,773,615	-		LRK53_RS17155	0.68	-0.9
3,773,615	-		LRK53_RS17155	0.68	+0.1
3,773,615	-		LRK53_RS17155	0.68	+0.8
3,773,615	-		LRK53_RS17155	0.68	-0.3
3,773,615	-		LRK53_RS17155	0.68	-0.4
3,773,615	-		LRK53_RS17155	0.68	+1.1
3,773,687	+		LRK53_RS17155	0.85	-1.0
3,773,687	+		LRK53_RS17155	0.85	+2.6
3,773,687	+		LRK53_RS17155	0.85	+2.5
3,773,687	+		LRK53_RS17155	0.85	+0.5
3,773,687	+		LRK53_RS17155	0.85	-0.3
3,773,687	+		LRK53_RS17155	0.85	+0.1
3,773,687	+		LRK53_RS17155	0.85	+0.3
3,773,687	+		LRK53_RS17155	0.85	-0.6
3,773,687	+		LRK53_RS17155	0.85	-1.3
3,773,687	+		LRK53_RS17155	0.85	-0.4
3,773,687	+		LRK53_RS17155	0.85	-1.1
3,773,687	+		LRK53_RS17155	0.85	-0.7
3,773,688	-		LRK53_RS17155	0.85	-0.0
3,773,688	-		LRK53_RS17155	0.85	-1.2
3,773,688	-		LRK53_RS17155	0.85	-1.2
3,773,688	-		LRK53_RS17155	0.85	-1.3
3,773,688	-		LRK53_RS17155	0.85	-1.3
3,773,688	-		LRK53_RS17155	0.85	-2.2
3,773,688	-		LRK53_RS17155	0.85	+1.0
3,773,688	-		LRK53_RS17155	0.85	-0.2
3,773,688	-		LRK53_RS17155	0.85	+0.4
3,773,688	-		LRK53_RS17155	0.85	+1.0
3,773,688	-		LRK53_RS17155	0.85	+0.1
3,773,688	-		LRK53_RS17155	0.85	-1.0
3,773,688	-		LRK53_RS17155	0.85	+0.7
3,773,753	+				-0.5
3,773,753	+				-1.6
3,773,753	+				-0.7
3,773,753	+				-0.4
3,773,753	+				+1.3
3,773,914	+		LRK53_RS17160	0.14	-0.9
3,773,914	+		LRK53_RS17160	0.14	-2.3
3,773,915	-		LRK53_RS17160	0.14	+0.5
3,774,037	+		LRK53_RS17160	0.44	-0.5
3,774,038	-		LRK53_RS17160	0.44	-2.1
3,774,038	-		LRK53_RS17160	0.44	-0.6
3,774,169	+		LRK53_RS17160	0.76	-1.0
3,774,170	-		LRK53_RS17160	0.76	-2.2
3,774,170	-		LRK53_RS17160	0.76	-1.0
3,774,170	-		LRK53_RS17160	0.76	+0.3
3,774,170	-		LRK53_RS17160	0.76	-0.3
3,774,199	+		LRK53_RS17160	0.83	+0.9
3,774,199	+		LRK53_RS17160	0.83	-1.4
3,774,199	+		LRK53_RS17160	0.83	-1.3
3,774,199	+		LRK53_RS17160	0.83	-0.8
3,774,200	-		LRK53_RS17160	0.83	+0.7
3,774,200	-		LRK53_RS17160	0.83	+1.3
3,774,200	-		LRK53_RS17160	0.83	-0.2
3,774,200	-		LRK53_RS17160	0.83	-0.9
3,774,200	-		LRK53_RS17160	0.83	+1.8
3,774,200	-		LRK53_RS17160	0.83	+0.3
3,774,200	-		LRK53_RS17160	0.83	+3.6
3,774,200	-		LRK53_RS17160	0.83	-0.5
3,774,200	-		LRK53_RS17160	0.83	-0.5
3,774,200	-		LRK53_RS17160	0.83	-0.1
3,774,265	+				-0.9
3,774,265	+				-2.2
3,774,265	+				-0.1
3,774,266	-				-0.2
3,774,266	-				-0.2
3,774,266	-				-1.5
3,774,304	+				+0.5
3,774,304	+				-1.8
3,774,304	+				-2.3
3,774,305	-				+0.8
3,774,305	-				-0.0
3,774,305	-				-1.1
3,774,305	-				-0.3
3,774,305	-				+1.0
3,774,427	+		LRK53_RS17165	0.30	-3.2
3,774,427	+		LRK53_RS17165	0.30	-1.5
3,774,427	+		LRK53_RS17165	0.30	+1.0
3,774,427	+		LRK53_RS17165	0.30	-1.3
3,774,427	+		LRK53_RS17165	0.30	-1.0
3,774,428	-		LRK53_RS17165	0.30	-1.7
3,774,428	-		LRK53_RS17165	0.30	-1.3
3,774,600	+		LRK53_RS17165	0.65	-0.2
3,774,600	+		LRK53_RS17165	0.65	-0.0
3,774,600	+		LRK53_RS17165	0.65	-0.3
3,774,600	+		LRK53_RS17165	0.65	-1.5
3,774,600	+		LRK53_RS17165	0.65	-0.4
3,774,600	+		LRK53_RS17165	0.65	+0.9
3,774,600	+		LRK53_RS17165	0.65	+2.5
3,774,600	+		LRK53_RS17165	0.65	+1.3
3,774,600	+		LRK53_RS17165	0.65	-0.7
3,774,601	-		LRK53_RS17165	0.65	+0.6
3,774,601	-		LRK53_RS17165	0.65	-0.6
3,774,601	-		LRK53_RS17165	0.65	-0.3
3,774,804	+				-1.0
3,774,804	+				-0.1
3,774,804	+				+0.3
3,774,804	+				-0.4
3,774,804	+				-0.9
3,774,804	+				-2.1
3,774,804	+				+0.4
3,774,804	+				-0.4
3,774,804	+				+0.1
3,774,804	+				+0.2
3,774,804	+				-0.4
3,774,804	+				-1.8
3,774,805	-				+1.3
3,774,805	-				+0.9
3,774,805	-				-1.8
3,774,805	-				-1.4
3,774,805	-				+0.6
3,774,805	-				-0.3
3,774,805	-				-2.3
3,774,805	-				+0.2
3,774,805	-				-0.9
3,774,810	+				+0.1
3,774,810	+				-0.8
3,774,810	+				-0.7
3,774,810	+				-2.2
3,774,810	+				+0.5
3,774,810	+				-1.4
3,774,810	+				-2.2
3,774,810	+				+0.5
3,774,810	+				-1.7
3,774,810	+				-0.3
3,774,810	+				+0.5
3,774,810	+				+0.5
3,774,811	-				-1.3
3,774,811	-				-0.1
3,774,811	-				-1.2
3,774,811	-				-0.9
3,774,811	-				-1.0
3,774,811	-				-0.5
3,774,811	-				-0.3
3,774,811	-				-0.1
3,774,811	-				-0.9
3,774,811	-				-0.1
3,774,811	-				-0.7
3,774,811	-				-1.5
3,774,811	-				-1.5
3,775,227	+				+0.1
3,775,228	-				+0.2
3,775,228	-				-0.2
3,775,228	-				-1.7