Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15250

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
3,326,242	+				-0.2
3,326,242	+				-0.7
3,326,242	+				-2.4
3,326,242	+				-2.0
3,326,242	+				-1.2
3,326,242	+				-0.5
3,326,242	+				+1.0
3,326,242	+				-0.8
3,326,242	+				+0.5
3,326,242	+				-0.7
3,326,242	+				-0.1
3,326,242	+				-1.4
3,326,242	+				-1.2
3,326,242	+				-0.7
3,326,242	+				+0.7
3,326,242	+				-0.5
3,326,242	+				-2.9
3,326,242	+				-1.3
3,326,242	+				-0.7
3,326,242	+				-1.2
3,326,242	+				-1.5
3,326,242	+				-0.3
3,326,242	+				-0.9
3,326,242	+				-0.5
3,326,242	+				-1.6
3,326,242	+				+0.6
3,326,242	+				+0.6
3,326,242	+				-1.5
3,326,242	+				-0.6
3,326,242	+				-1.3
3,326,242	+				+1.6
3,326,242	+				-1.4
3,326,242	+				+1.1
3,326,242	+				-0.5
3,326,242	+				-1.3
3,326,242	+				-1.7
3,326,242	+				-0.3
3,326,242	+				+0.0
3,326,242	+				-1.5
3,326,242	+				-0.9
3,326,242	+				+0.7
3,326,242	+				-0.4
3,326,243	-				-0.7
3,326,243	-				-0.8
3,326,243	-				-0.9
3,326,243	-				+0.3
3,326,243	-				-2.4
3,326,243	-				-1.0
3,326,243	-				-2.6
3,326,243	-				-0.2
3,326,243	-				-1.7
3,326,243	-				-0.5
3,326,243	-				-0.4
3,326,243	-				-2.5
3,326,243	-				-0.9
3,326,243	-				-1.2
3,326,243	-				-1.0
3,326,243	-				-1.5
3,326,243	-				+0.3
3,326,243	-				+0.4
3,326,243	-				+0.4
3,326,243	-				-1.1
3,326,243	-				-0.2
3,326,243	-				-1.6
3,326,243	-				-1.2
3,326,243	-				-3.4
3,326,243	-				-1.9
3,326,243	-				-0.7
3,326,243	-				-0.5
3,326,243	-				-1.3
3,326,243	-				-1.4
3,326,243	-				+0.1
3,326,243	-				+0.4
3,326,243	-				-0.7
3,326,244	+				-1.2
3,326,244	+				-0.4
3,326,244	+				-1.2
3,326,244	+				+0.8
3,326,244	+				-0.1
3,326,244	+				-1.2
3,326,244	+				-0.5
3,326,244	+				-2.1
3,326,244	+				-1.3
3,326,244	+				+0.3
3,326,244	+				-1.7
3,326,244	+				-1.9
3,326,245	-				-0.2
3,326,245	-				-0.6
3,326,245	-				-1.3
3,326,245	-				+1.8
3,326,245	-				-1.2
3,326,245	-				-0.3
3,326,245	-				-0.9
3,326,245	-				+1.1
3,326,448	+		LRK53_RS15250	0.27	-0.7
3,326,448	+		LRK53_RS15250	0.27	-1.8
3,326,448	+		LRK53_RS15250	0.27	-0.9
3,326,448	+		LRK53_RS15250	0.27	+0.0
3,326,448	+		LRK53_RS15250	0.27	-0.7
3,326,448	+		LRK53_RS15250	0.27	-0.9
3,326,448	+		LRK53_RS15250	0.27	-2.3
3,326,448	+		LRK53_RS15250	0.27	-0.8
3,326,448	+		LRK53_RS15250	0.27	-0.2
3,326,448	+		LRK53_RS15250	0.27	-0.1
3,326,448	+		LRK53_RS15250	0.27	-2.4
3,326,448	+		LRK53_RS15250	0.27	-1.2
3,326,449	-		LRK53_RS15250	0.27	-1.0
3,326,449	-		LRK53_RS15250	0.27	-0.6
3,326,449	-		LRK53_RS15250	0.27	-1.8
3,326,449	-		LRK53_RS15250	0.27	-1.0
3,326,449	-		LRK53_RS15250	0.27	-0.6
3,326,449	-		LRK53_RS15250	0.27	-2.3
3,326,449	-		LRK53_RS15250	0.27	-0.9
3,326,449	-		LRK53_RS15250	0.27	-2.0
3,326,449	-		LRK53_RS15250	0.27	+0.6
3,326,449	-		LRK53_RS15250	0.27	+0.3
3,326,449	-		LRK53_RS15250	0.27	-1.6
3,326,449	-		LRK53_RS15250	0.27	-1.6
3,326,449	-		LRK53_RS15250	0.27	-1.1
3,326,914	+		LRK53_RS15250	0.70	-1.2
3,326,914	+		LRK53_RS15250	0.70	-0.8
3,326,915	-		LRK53_RS15250	0.70	-0.9
3,326,915	-		LRK53_RS15250	0.70	+0.1
3,326,915	-		LRK53_RS15250	0.70	-2.1
3,326,915	-		LRK53_RS15250	0.70	-1.0
3,327,333	+				-0.2
3,327,334	-				-1.3
3,327,340	+		LRK53_RS15255	0.10	+1.3
3,327,340	+		LRK53_RS15255	0.10	-1.6
3,327,340	+		LRK53_RS15255	0.10	-2.3
3,327,340	+		LRK53_RS15255	0.10	-0.7
3,327,340	+		LRK53_RS15255	0.10	-1.6
3,327,341	-		LRK53_RS15255	0.10	+0.1
3,327,341	-		LRK53_RS15255	0.10	-0.2
3,327,393	+		LRK53_RS15255	0.15	-1.4
3,327,394	-		LRK53_RS15255	0.15	-0.3
3,327,394	-		LRK53_RS15255	0.15	-0.5
3,327,394	-		LRK53_RS15255	0.15	-0.9
3,327,486	+		LRK53_RS15255	0.24	+0.2
3,327,486	+		LRK53_RS15255	0.24	-0.7
3,327,487	-		LRK53_RS15255	0.24	+0.5
3,327,487	-		LRK53_RS15255	0.24	-0.9
3,327,487	-		LRK53_RS15255	0.24	+1.3
3,327,487	-		LRK53_RS15255	0.24	-0.3
3,327,487	-		LRK53_RS15255	0.24	-0.9
3,327,489	+		LRK53_RS15255	0.24	+1.0
3,327,489	+		LRK53_RS15255	0.24	+0.8
3,327,489	+		LRK53_RS15255	0.24	+0.1
3,327,489	+		LRK53_RS15255	0.24	-0.9
3,327,489	+		LRK53_RS15255	0.24	-0.9
3,327,489	+		LRK53_RS15255	0.24	-0.1
3,327,489	+		LRK53_RS15255	0.24	-0.4
3,327,490	-		LRK53_RS15255	0.24	-1.8
3,327,490	-		LRK53_RS15255	0.24	-1.9
3,327,702	+		LRK53_RS15255	0.44	-0.5
3,327,703	-		LRK53_RS15255	0.44	-1.3
3,327,780	+		LRK53_RS15255	0.51	-0.7
3,327,780	+		LRK53_RS15255	0.51	-0.6
3,327,780	+		LRK53_RS15255	0.51	+0.6
3,327,780	+		LRK53_RS15255	0.51	-1.6
3,327,780	+		LRK53_RS15255	0.51	-1.3
3,327,780	+		LRK53_RS15255	0.51	-0.4
3,327,780	+		LRK53_RS15255	0.51	-1.2
3,327,780	+		LRK53_RS15255	0.51	-1.9
3,327,781	-		LRK53_RS15255	0.51	+1.0
3,327,781	-		LRK53_RS15255	0.51	+0.7
3,327,781	-		LRK53_RS15255	0.51	-2.4
3,327,781	-		LRK53_RS15255	0.51	-1.8
3,327,781	-		LRK53_RS15255	0.51	+1.0
3,327,781	-		LRK53_RS15255	0.51	+0.3
3,327,895	+		LRK53_RS15255	0.62	-0.6
3,327,895	+		LRK53_RS15255	0.62	-0.9
3,327,895	+		LRK53_RS15255	0.62	-2.5
3,328,132	-		LRK53_RS15255	0.84	+2.0
3,328,193	+				+0.4