Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14905

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
3,259,357	+		LRK53_RS14900	0.53	-0.5
3,259,357	+		LRK53_RS14900	0.53	+1.8
3,259,357	+		LRK53_RS14900	0.53	+1.3
3,259,358	-		LRK53_RS14900	0.53	+0.1
3,259,358	-		LRK53_RS14900	0.53	-2.9
3,259,358	-		LRK53_RS14900	0.53	-1.5
3,259,358	-		LRK53_RS14900	0.53	-2.6
3,259,358	-		LRK53_RS14900	0.53	+1.8
3,259,358	-		LRK53_RS14900	0.53	-0.5
3,259,923	+				-1.2
3,260,261	+		LRK53_RS14905	0.30	-1.2
3,260,261	+		LRK53_RS14905	0.30	-1.0
3,260,261	+		LRK53_RS14905	0.30	-1.0
3,260,261	+		LRK53_RS14905	0.30	-0.9
3,260,261	+		LRK53_RS14905	0.30	+0.5
3,260,261	+		LRK53_RS14905	0.30	+0.7
3,260,261	+		LRK53_RS14905	0.30	-0.6
3,260,261	+		LRK53_RS14905	0.30	-0.3
3,260,262	-		LRK53_RS14905	0.30	+1.8
3,260,262	-		LRK53_RS14905	0.30	-0.9
3,260,262	-		LRK53_RS14905	0.30	-0.5
3,260,262	-		LRK53_RS14905	0.30	-0.3
3,260,262	-		LRK53_RS14905	0.30	+1.3
3,260,262	-		LRK53_RS14905	0.30	+0.1
3,260,262	-		LRK53_RS14905	0.30	+1.9
3,260,262	-		LRK53_RS14905	0.30	-0.2
3,260,262	-		LRK53_RS14905	0.30	+1.7
3,260,312	+		LRK53_RS14905	0.35	-0.4
3,260,312	+		LRK53_RS14905	0.35	-0.9
3,260,312	+		LRK53_RS14905	0.35	-0.7
3,260,312	+		LRK53_RS14905	0.35	+1.7
3,260,312	+		LRK53_RS14905	0.35	-1.1
3,260,312	+		LRK53_RS14905	0.35	+1.6
3,260,312	+		LRK53_RS14905	0.35	+0.7
3,260,312	+		LRK53_RS14905	0.35	-2.0
3,260,312	+		LRK53_RS14905	0.35	-1.3
3,260,312	+		LRK53_RS14905	0.35	+0.8
3,260,312	+		LRK53_RS14905	0.35	+0.3
3,260,312	+		LRK53_RS14905	0.35	-1.5
3,260,312	+		LRK53_RS14905	0.35	-0.5
3,260,312	+		LRK53_RS14905	0.35	-1.6
3,260,312	+		LRK53_RS14905	0.35	-1.9
3,260,312	+		LRK53_RS14905	0.35	-2.0
3,260,312	+		LRK53_RS14905	0.35	+1.1
3,260,312	+		LRK53_RS14905	0.35	+0.4
3,260,312	+		LRK53_RS14905	0.35	-1.2
3,260,313	-		LRK53_RS14905	0.35	-1.0
3,260,313	-		LRK53_RS14905	0.35	+0.9
3,260,313	-		LRK53_RS14905	0.35	-0.9
3,260,313	-		LRK53_RS14905	0.35	+0.9
3,260,313	-		LRK53_RS14905	0.35	-2.0
3,260,313	-		LRK53_RS14905	0.35	-0.2
3,260,313	-		LRK53_RS14905	0.35	-1.7
3,260,313	-		LRK53_RS14905	0.35	+1.0
3,260,313	-		LRK53_RS14905	0.35	-0.7
3,260,313	-		LRK53_RS14905	0.35	-1.2
3,260,313	-		LRK53_RS14905	0.35	-0.8
3,260,313	-		LRK53_RS14905	0.35	+0.2
3,260,313	-		LRK53_RS14905	0.35	-0.4
3,260,416	+		LRK53_RS14905	0.44	+0.4
3,260,416	+		LRK53_RS14905	0.44	+0.1
3,260,416	+		LRK53_RS14905	0.44	+1.6
3,260,416	+		LRK53_RS14905	0.44	-1.6
3,260,416	+		LRK53_RS14905	0.44	-0.0
3,260,416	+		LRK53_RS14905	0.44	-0.8
3,260,416	+		LRK53_RS14905	0.44	-0.9
3,260,417	-		LRK53_RS14905	0.44	-1.0
3,260,417	-		LRK53_RS14905	0.44	+1.1
3,260,417	-		LRK53_RS14905	0.44	-3.3
3,260,417	-		LRK53_RS14905	0.44	-1.0
3,261,001	+				-0.8
3,261,018	+				-1.3
3,261,018	+				-1.8
3,261,018	+				+0.9
3,261,018	+				-0.6
3,261,018	+				+1.3
3,261,018	+				-0.6
3,261,019	-				-1.4
3,261,019	-				+1.1
3,261,019	-				-2.3
3,261,019	-				+1.4
3,261,019	-				-1.0
3,261,154	+				-0.4
3,261,305	-		LRK53_RS14910	0.31	-0.6
3,261,454	+		LRK53_RS14910	0.54	-1.9
3,261,619	+		LRK53_RS14910	0.79	+0.6
3,261,619	+		LRK53_RS14910	0.79	-0.8
3,261,619	+		LRK53_RS14910	0.79	-1.5
3,261,619	+		LRK53_RS14910	0.79	-1.3
3,261,619	+		LRK53_RS14910	0.79	-0.8
3,261,619	+		LRK53_RS14910	0.79	-2.7
3,261,620	-		LRK53_RS14910	0.80	-1.1
3,261,620	-		LRK53_RS14910	0.80	-1.4
3,261,838	-		LRK53_RS14915	0.10	-1.2
3,261,865	-		LRK53_RS14915	0.13	+2.0
3,261,903	+		LRK53_RS14915	0.17	-0.6
3,261,903	+		LRK53_RS14915	0.17	-1.8
3,261,903	+		LRK53_RS14915	0.17	+0.1
3,261,903	+		LRK53_RS14915	0.17	-0.6
3,261,903	+		LRK53_RS14915	0.17	+1.2
3,261,903	+		LRK53_RS14915	0.17	-1.9
3,261,903	+		LRK53_RS14915	0.17	-0.0
3,261,903	+		LRK53_RS14915	0.17	+0.1
3,261,903	+		LRK53_RS14915	0.17	-0.6
3,261,903	+		LRK53_RS14915	0.17	+1.1
3,261,904	-		LRK53_RS14915	0.18	-1.0
3,261,904	-		LRK53_RS14915	0.18	-0.9
3,261,904	-		LRK53_RS14915	0.18	-3.1
3,261,904	-		LRK53_RS14915	0.18	-0.8
3,261,904	-		LRK53_RS14915	0.18	-0.8
3,261,904	-		LRK53_RS14915	0.18	-0.7
3,261,904	-		LRK53_RS14915	0.18	+0.1