Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14385

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
3,150,950	+				-0.6
3,150,950	+				-0.9
3,150,950	+				-0.1
3,150,950	+				-1.3
3,150,950	+				+0.5
3,150,950	+				+1.2
3,150,950	+				+0.6
3,150,950	+				-0.7
3,150,950	+				+0.9
3,150,951	-				-1.9
3,150,951	-				-1.9
3,150,951	-				+1.1
3,151,121	+				-3.0
3,151,122	-				-0.4
3,151,206	+				-1.1
3,151,206	+				-1.1
3,151,206	+				-0.9
3,151,206	+				-1.4
3,151,206	+				-2.0
3,151,206	+				-0.4
3,151,206	+				+0.6
3,151,207	-				-1.5
3,151,207	-				-0.4
3,151,207	-				-1.7
3,151,207	-				-1.6
3,151,867	+				-0.9
3,151,867	+				+0.1
3,151,867	+				+1.3
3,151,867	+				-1.1
3,151,867	+				-1.7
3,151,867	+				+1.6
3,151,867	+				-2.6
3,151,868	-				-1.0
3,151,868	-				-1.2
3,151,868	-				-3.4
3,151,868	-				-1.7
3,151,868	-				-2.2
3,151,868	-				+0.3
3,151,868	-				-1.1
3,151,868	-				+0.6
3,151,884	+				-2.1
3,151,884	+				-1.4
3,151,884	+				+1.3
3,151,884	+				-2.2
3,151,884	+				-1.0
3,151,884	+				-0.6
3,151,885	-				-2.0
3,151,885	-				-0.8
3,151,885	-				-1.1
3,151,885	-				+1.6
3,151,885	-				+0.2
3,152,078	+		LRK53_RS14385	0.22	-2.4
3,152,078	+		LRK53_RS14385	0.22	-1.4
3,152,079	-		LRK53_RS14385	0.22	-1.3
3,152,079	-		LRK53_RS14385	0.22	-2.1
3,152,336	+		LRK53_RS14385	0.56	-0.4
3,152,336	+		LRK53_RS14385	0.56	-1.1
3,152,336	+		LRK53_RS14385	0.56	+0.1
3,152,336	+		LRK53_RS14385	0.56	-1.1
3,152,337	-		LRK53_RS14385	0.56	-0.6
3,152,369	+		LRK53_RS14385	0.60	-2.4
3,152,369	+		LRK53_RS14385	0.60	-0.8
3,152,369	+		LRK53_RS14385	0.60	-2.0
3,152,369	+		LRK53_RS14385	0.60	-0.4
3,152,370	-		LRK53_RS14385	0.60	-1.9
3,152,370	-		LRK53_RS14385	0.60	+0.9
3,152,370	-		LRK53_RS14385	0.60	-1.0
3,152,370	-		LRK53_RS14385	0.60	-0.7
3,152,423	+		LRK53_RS14385	0.67	-0.4
3,152,600	+				-1.3
3,152,600	+				-1.8
3,152,600	+				-2.4
3,152,600	+				+0.4
3,152,600	+				+1.2
3,152,600	+				-1.2
3,152,600	+				+2.2
3,152,600	+				+0.3
3,152,600	+				-0.2
3,152,600	+				+1.5
3,152,600	+				-0.4
3,152,600	+				+0.8
3,152,600	+				-0.4
3,152,600	+				-1.3
3,152,600	+				-2.2
3,152,600	+				-0.0
3,152,600	+				+0.6
3,152,601	-				-1.1
3,152,601	-				-0.9
3,152,601	-				-2.1
3,152,601	-				-1.1
3,152,601	-				-2.2
3,152,601	-				-0.4
3,152,601	-				-2.8
3,152,601	-				-0.9
3,152,601	-				+1.7
3,152,601	-				-1.2
3,152,601	-				-1.3
3,152,601	-				-1.2
3,152,601	-				-0.2
3,152,601	-				+0.8
3,152,601	-				+0.3
3,152,660	+				-2.3
3,152,660	+				-0.2
3,152,661	-				-0.2
3,152,661	-				-1.0
3,152,711	+				-0.7
3,152,711	+				+0.9
3,152,711	+				+0.7
3,152,711	+				-1.0
3,152,711	+				-0.7
3,152,711	+				-0.4
3,152,711	+				+0.8
3,152,711	+				-1.3
3,152,711	+				+1.9
3,152,711	+				+0.2
3,152,712	-				-0.9
3,152,712	-				-1.6
3,152,712	-				-1.0
3,152,712	-				-1.5
3,152,712	-				-0.4
3,152,712	-				+2.1
3,152,712	-				-1.0
3,152,712	-				-1.3
3,152,712	-				+0.1
3,152,712	-				-0.8
3,152,712	-				-0.6
3,152,712	-				-1.7
3,152,740	+				-0.2
3,152,740	+				-0.6
3,152,740	+				-1.1
3,152,740	+				-1.4
3,152,740	+				+0.5
3,152,740	+				+0.0
3,152,740	+				-0.3
3,152,741	-				+0.2
3,152,741	-				+0.3
3,152,741	-				-0.4
3,152,741	-				-0.6
3,152,800	-		LRK53_RS14390	0.23	-0.7
3,152,800	-		LRK53_RS14390	0.23	-2.0
3,152,838	+		LRK53_RS14390	0.32	-1.1
3,152,838	+		LRK53_RS14390	0.32	-1.5
3,152,839	-		LRK53_RS14390	0.32	-1.3
3,152,839	-		LRK53_RS14390	0.32	+0.3
3,152,839	-		LRK53_RS14390	0.32	+0.5
3,152,839	-		LRK53_RS14390	0.32	-1.8
3,152,839	-		LRK53_RS14390	0.32	+2.0
3,152,839	-		LRK53_RS14390	0.32	-1.5
3,152,874	+		LRK53_RS14390	0.40	-1.4
3,152,874	+		LRK53_RS14390	0.40	-1.1
3,152,874	+		LRK53_RS14390	0.40	+0.2
3,152,874	+		LRK53_RS14390	0.40	-1.7
3,152,874	+		LRK53_RS14390	0.40	-2.7
3,152,875	-		LRK53_RS14390	0.40	-0.5
3,152,875	-		LRK53_RS14390	0.40	-2.2
3,152,875	-		LRK53_RS14390	0.40	-0.3
3,152,875	-		LRK53_RS14390	0.40	-1.0
3,152,875	-		LRK53_RS14390	0.40	-0.6
3,152,875	-		LRK53_RS14390	0.40	-1.4
3,152,875	-		LRK53_RS14390	0.40	-1.2
3,152,875	-		LRK53_RS14390	0.40	+0.1
3,152,907	+		LRK53_RS14390	0.47	+2.6
3,152,907	+		LRK53_RS14390	0.47	-0.1
3,152,907	+		LRK53_RS14390	0.47	-4.1
3,152,907	+		LRK53_RS14390	0.47	-0.5
3,152,907	+		LRK53_RS14390	0.47	+1.7
3,152,907	+		LRK53_RS14390	0.47	-2.1
3,152,907	+		LRK53_RS14390	0.47	-0.0
3,152,907	+		LRK53_RS14390	0.47	-1.2
3,152,907	+		LRK53_RS14390	0.47	-0.9
3,152,907	+		LRK53_RS14390	0.47	+1.9
3,152,907	+		LRK53_RS14390	0.47	-0.2
3,152,908	-		LRK53_RS14390	0.47	-1.2
3,152,908	-		LRK53_RS14390	0.47	-0.7
3,152,908	-		LRK53_RS14390	0.47	-0.2
3,152,908	-		LRK53_RS14390	0.47	-0.7
3,152,908	-		LRK53_RS14390	0.47	-1.4
3,152,908	-		LRK53_RS14390	0.47	-1.4
3,152,908	-		LRK53_RS14390	0.47	+0.4
3,152,908	-		LRK53_RS14390	0.47	-0.8
3,152,908	-		LRK53_RS14390	0.47	+1.0
3,152,908	-		LRK53_RS14390	0.47	-2.5
3,152,908	-		LRK53_RS14390	0.47	-0.8
3,152,908	-		LRK53_RS14390	0.47	-0.6
3,152,908	-		LRK53_RS14390	0.47	-0.8
3,152,908	-		LRK53_RS14390	0.47	-0.9
3,152,985	+		LRK53_RS14390	0.65	+0.3
3,153,373	+				+2.6
3,153,373	+				-1.1
3,153,374	-				+0.5
3,153,374	-				-2.0
3,153,374	-				-0.4
3,153,374	-				-0.3
3,153,374	-				-1.0
3,153,374	-				-1.6
3,153,422	+				-1.5
3,153,423	-				-0.0
3,153,423	-				-1.9
3,153,457	+		LRK53_RS14395	0.11	+1.0
3,153,457	+		LRK53_RS14395	0.11	-1.1
3,153,457	+		LRK53_RS14395	0.11	-0.3
3,153,457	+		LRK53_RS14395	0.11	+0.3
3,153,457	+		LRK53_RS14395	0.11	-0.4
3,153,457	+		LRK53_RS14395	0.11	-0.4
3,153,458	-		LRK53_RS14395	0.11	-1.5
3,153,458	-		LRK53_RS14395	0.11	-0.9
3,153,458	-		LRK53_RS14395	0.11	-0.5
3,153,458	-		LRK53_RS14395	0.11	+0.7
3,153,458	-		LRK53_RS14395	0.11	+1.6
3,153,458	-		LRK53_RS14395	0.11	+1.0
3,153,458	-		LRK53_RS14395	0.11	+0.3
3,153,458	-		LRK53_RS14395	0.11	+0.9
3,153,458	-		LRK53_RS14395	0.11	-1.0
3,153,458	-		LRK53_RS14395	0.11	-0.4
3,153,458	-		LRK53_RS14395	0.11	-0.3
3,153,458	-		LRK53_RS14395	0.11	-1.2
3,153,516	-		LRK53_RS14395	0.13	-1.9
3,153,516	-		LRK53_RS14395	0.13	-1.6