Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12470

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
2,764,159	-		LRK53_RS12460	0.81	-1.6
2,764,159	-		LRK53_RS12460	0.81	+0.0
2,764,218	+		LRK53_RS12460	0.89	-0.7
2,764,218	+		LRK53_RS12460	0.89	-1.4
2,764,218	+		LRK53_RS12460	0.89	-1.4
2,764,218	+		LRK53_RS12460	0.89	-1.0
2,764,218	+		LRK53_RS12460	0.89	+0.5
2,764,218	+		LRK53_RS12460	0.89	-1.5
2,764,218	+		LRK53_RS12460	0.89	-1.5
2,764,219	-		LRK53_RS12460	0.89	-1.4
2,764,219	-		LRK53_RS12460	0.89	+1.4
2,764,219	-		LRK53_RS12460	0.89	+0.7
2,764,219	-		LRK53_RS12460	0.89	-1.4
2,764,219	-		LRK53_RS12460	0.89	-1.1
2,764,219	-		LRK53_RS12460	0.89	-1.0
2,764,219	-		LRK53_RS12460	0.89	-1.6
2,764,219	-		LRK53_RS12460	0.89	+0.6
2,764,219	-		LRK53_RS12460	0.89	-0.2
2,764,219	-		LRK53_RS12460	0.89	-0.1
2,764,266	+				-1.5
2,764,267	-				+0.0
2,764,267	-				+0.5
2,764,267	-				-1.1
2,764,267	-				-0.8
2,764,323	+				-0.0
2,764,324	-				-1.7
2,764,367	-				-2.2
2,764,367	-				-0.1
2,764,404	+				+0.1
2,764,404	+				-2.0
2,764,404	+				-0.8
2,764,404	+				-0.5
2,764,404	+				-1.3
2,764,405	-				-1.5
2,764,405	-				-2.0
2,764,405	-				-0.3
2,764,462	+				-1.3
2,764,462	+				+0.6
2,764,462	+				-1.5
2,764,462	+				-0.6
2,764,462	+				-2.3
2,764,462	+				-2.5
2,764,462	+				-0.7
2,764,462	+				-2.2
2,764,462	+				-0.0
2,764,462	+				-1.7
2,764,462	+				-1.7
2,764,462	+				-1.6
2,764,462	+				-3.4
2,764,462	+				+0.1
2,764,462	+				-0.2
2,764,462	+				-0.6
2,764,462	+				+0.4
2,764,463	-				-0.0
2,764,463	-				-0.2
2,764,463	-				-1.5
2,764,463	-				+0.0
2,764,463	-				+1.5
2,764,463	-				-0.7
2,764,463	-				+0.4
2,764,463	-				-0.6
2,764,463	-				-1.3
2,764,463	-				-2.5
2,764,463	-				+0.8
2,764,463	-				-1.6
2,764,463	-				+0.3
2,764,463	-				-0.3
2,764,463	-				-1.7
2,764,463	-				-2.7
2,764,481	+				-0.3
2,764,481	+				+1.0
2,764,482	-				-1.0
2,764,482	-				-2.0
2,764,482	-				+0.5
2,764,574	+				+0.4
2,764,574	+				-0.4
2,764,574	+				+0.9
2,764,574	+				-1.4
2,764,826	+		LRK53_RS12465	0.73	-0.7
2,764,827	-		LRK53_RS12465	0.74	-0.6
2,764,827	-		LRK53_RS12465	0.74	-1.2
2,764,919	+				-0.3
2,764,920	-				-1.9
2,764,954	+				+0.8
2,764,954	+				-0.6
2,764,954	+				-0.6
2,764,954	+				-1.1
2,764,954	+				-0.8
2,764,954	+				-1.5
2,764,954	+				-0.8
2,764,954	+				-1.2
2,764,955	-				-1.2
2,764,955	-				-1.3
2,764,955	-				-1.3
2,764,955	-				-2.7
2,764,955	-				-1.6
2,764,955	-				-0.5
2,764,955	-				-0.1
2,764,955	-				+0.1
2,764,955	-				-1.1
2,764,955	-				+0.1
2,764,955	-				-0.1
2,764,955	-				+2.5
2,764,955	-				-1.2
2,764,955	-				-2.1
2,764,955	-				+0.6
2,764,999	+		LRK53_RS12470	0.13	-2.4
2,764,999	+		LRK53_RS12470	0.13	-1.7
2,764,999	+		LRK53_RS12470	0.13	-0.5
2,764,999	+		LRK53_RS12470	0.13	-0.2
2,764,999	+		LRK53_RS12470	0.13	-1.4
2,764,999	+		LRK53_RS12470	0.13	-0.3
2,765,000	-		LRK53_RS12470	0.14	-0.6
2,765,000	-		LRK53_RS12470	0.14	-1.6
2,765,000	-		LRK53_RS12470	0.14	-0.3
2,765,000	-		LRK53_RS12470	0.14	+0.5
2,765,000	-		LRK53_RS12470	0.14	-1.4
2,765,000	-		LRK53_RS12470	0.14	+0.2
2,765,139	+		LRK53_RS12470	0.58	-3.1
2,765,139	+		LRK53_RS12470	0.58	+0.1
2,765,139	+		LRK53_RS12470	0.58	-1.7
2,765,139	+		LRK53_RS12470	0.58	-1.6
2,765,139	+		LRK53_RS12470	0.58	-0.1
2,765,140	-		LRK53_RS12470	0.59	-1.1
2,765,140	-		LRK53_RS12470	0.59	-0.1
2,765,150	-		LRK53_RS12470	0.62	-1.6
2,765,150	-		LRK53_RS12470	0.62	-0.0
2,765,150	-		LRK53_RS12470	0.62	-0.5
2,765,155	+		LRK53_RS12470	0.63	-3.2
2,765,155	+		LRK53_RS12470	0.63	+1.5
2,765,155	+		LRK53_RS12470	0.63	-2.1
2,765,155	+		LRK53_RS12470	0.63	-1.7
2,765,155	+		LRK53_RS12470	0.63	-0.8
2,765,155	+		LRK53_RS12470	0.63	-1.1
2,765,155	+		LRK53_RS12470	0.63	-1.2
2,765,156	-		LRK53_RS12470	0.64	-1.0
2,765,156	-		LRK53_RS12470	0.64	-2.4
2,765,156	-		LRK53_RS12470	0.64	-0.4
2,765,156	-		LRK53_RS12470	0.64	-0.1
2,765,156	-		LRK53_RS12470	0.64	+1.3
2,765,156	-		LRK53_RS12470	0.64	-1.2
2,765,160	+		LRK53_RS12470	0.65	-0.7
2,765,160	+		LRK53_RS12470	0.65	+0.9
2,765,160	+		LRK53_RS12470	0.65	-0.7
2,765,338	+		LRK53_RS12475	0.23	-1.7
2,765,338	+		LRK53_RS12475	0.23	-1.1
2,765,338	+		LRK53_RS12475	0.23	-0.9
2,765,338	+		LRK53_RS12475	0.23	+0.2
2,765,339	-		LRK53_RS12475	0.23	-0.1
2,765,339	-		LRK53_RS12475	0.23	-2.0
2,765,339	-		LRK53_RS12475	0.23	-1.0
2,765,380	+		LRK53_RS12475	0.37	-0.3
2,765,380	+		LRK53_RS12475	0.37	-0.3
2,765,380	+		LRK53_RS12475	0.37	-1.0
2,765,380	+		LRK53_RS12475	0.37	-1.9
2,765,380	+		LRK53_RS12475	0.37	-2.4
2,765,380	+		LRK53_RS12475	0.37	-0.8
2,765,383	+		LRK53_RS12475	0.37	-1.0
2,765,383	+		LRK53_RS12475	0.37	+1.0
2,765,383	+		LRK53_RS12475	0.37	+0.1
2,765,383	+		LRK53_RS12475	0.37	-0.6
2,765,383	+		LRK53_RS12475	0.37	-0.9
2,765,383	+		LRK53_RS12475	0.37	-2.8
2,765,383	+		LRK53_RS12475	0.37	-3.1
2,765,383	+		LRK53_RS12475	0.37	-1.4
2,765,383	+		LRK53_RS12475	0.37	-0.5
2,765,383	+		LRK53_RS12475	0.37	-1.7
2,765,383	+		LRK53_RS12475	0.37	-0.6
2,765,383	+		LRK53_RS12475	0.37	-1.0
2,765,383	+		LRK53_RS12475	0.37	-1.7
2,765,383	+		LRK53_RS12475	0.37	-0.8
2,765,383	+		LRK53_RS12475	0.37	-0.4
2,765,383	+		LRK53_RS12475	0.37	-0.8
2,765,383	+		LRK53_RS12475	0.37	-1.7
2,765,383	+		LRK53_RS12475	0.37	-1.3
2,765,383	+		LRK53_RS12475	0.37	-1.2
2,765,384	-		LRK53_RS12475	0.38	-1.1
2,765,384	-		LRK53_RS12475	0.38	-1.9
2,765,384	-		LRK53_RS12475	0.38	-1.9
2,765,384	-		LRK53_RS12475	0.38	+0.5
2,765,384	-		LRK53_RS12475	0.38	+0.5
2,765,384	-		LRK53_RS12475	0.38	-0.9
2,765,384	-		LRK53_RS12475	0.38	-2.0
2,765,384	-		LRK53_RS12475	0.38	-0.3
2,765,384	-		LRK53_RS12475	0.38	-0.6
2,765,384	-		LRK53_RS12475	0.38	+0.7
2,765,384	-		LRK53_RS12475	0.38	+0.5
2,765,384	-		LRK53_RS12475	0.38	+0.1
2,765,384	-		LRK53_RS12475	0.38	-1.4
2,765,384	-		LRK53_RS12475	0.38	-0.5
2,765,394	+		LRK53_RS12475	0.41	-0.8
2,765,394	+		LRK53_RS12475	0.41	-0.0
2,765,395	-		LRK53_RS12475	0.41	-2.4
2,765,395	-		LRK53_RS12475	0.41	+0.0
2,765,395	-		LRK53_RS12475	0.41	-0.2
2,765,494	+		LRK53_RS12475	0.73	-0.4
2,765,494	+		LRK53_RS12475	0.73	+0.3
2,765,494	+		LRK53_RS12475	0.73	-0.4
2,765,494	+		LRK53_RS12475	0.73	+0.5
2,765,494	+		LRK53_RS12475	0.73	-0.4
2,765,494	+		LRK53_RS12475	0.73	-1.9
2,765,494	+		LRK53_RS12475	0.73	-1.2
2,765,494	+		LRK53_RS12475	0.73	-1.7
2,765,494	+		LRK53_RS12475	0.73	-0.3
2,765,494	+		LRK53_RS12475	0.73	-1.9
2,765,494	+		LRK53_RS12475	0.73	-1.5
2,765,494	+		LRK53_RS12475	0.73	-0.2
2,765,494	+		LRK53_RS12475	0.73	-0.5
2,765,494	+		LRK53_RS12475	0.73	-0.9
2,765,494	+		LRK53_RS12475	0.73	+1.9
2,765,495	-		LRK53_RS12475	0.73	-1.4
2,765,495	-		LRK53_RS12475	0.73	-0.6
2,765,512	+		LRK53_RS12475	0.78	-0.3
2,765,512	+		LRK53_RS12475	0.78	-0.2
2,765,512	+		LRK53_RS12475	0.78	-0.8
2,765,512	+		LRK53_RS12475	0.78	-3.2
2,765,512	+		LRK53_RS12475	0.78	-1.5
2,765,512	+		LRK53_RS12475	0.78	+0.2
2,765,512	+		LRK53_RS12475	0.78	-1.2
2,765,512	+		LRK53_RS12475	0.78	-0.5
2,765,512	+		LRK53_RS12475	0.78	+1.7
2,765,512	+		LRK53_RS12475	0.78	-0.0
2,765,512	+		LRK53_RS12475	0.78	-1.2
2,765,512	+		LRK53_RS12475	0.78	-1.7
2,765,512	+		LRK53_RS12475	0.78	-0.9
2,765,512	+		LRK53_RS12475	0.78	-0.6
2,765,512	+		LRK53_RS12475	0.78	-1.0
2,765,512	+		LRK53_RS12475	0.78	+1.0
2,765,512	+		LRK53_RS12475	0.78	-1.8
2,765,512	+		LRK53_RS12475	0.78	-1.2
2,765,512	+		LRK53_RS12475	0.78	-1.0
2,765,512	+		LRK53_RS12475	0.78	-0.9
2,765,512	+		LRK53_RS12475	0.78	-2.0
2,765,513	-		LRK53_RS12475	0.79	-0.0
2,765,513	-		LRK53_RS12475	0.79	+0.6
2,765,513	-		LRK53_RS12475	0.79	-1.8
2,765,513	-		LRK53_RS12475	0.79	+0.3
2,765,513	-		LRK53_RS12475	0.79	+0.2
2,765,513	-		LRK53_RS12475	0.79	-0.1
2,765,513	-		LRK53_RS12475	0.79	+0.1
2,765,513	-		LRK53_RS12475	0.79	-0.1
2,765,513	-		LRK53_RS12475	0.79	-0.1
2,765,513	-		LRK53_RS12475	0.79	-1.5
2,765,513	-		LRK53_RS12475	0.79	-1.0
2,765,513	-		LRK53_RS12475	0.79	-1.4
2,765,513	-		LRK53_RS12475	0.79	-1.5
2,765,530	+		LRK53_RS12475	0.84	-1.1
2,765,530	+		LRK53_RS12475	0.84	-0.7
2,765,530	+		LRK53_RS12475	0.84	+0.6
2,765,531	-		LRK53_RS12475	0.84	-0.7
2,765,531	-		LRK53_RS12475	0.84	-1.4
2,765,531	-		LRK53_RS12475	0.84	-0.5
2,765,536	+		LRK53_RS12475	0.86	-0.7
2,765,536	+		LRK53_RS12475	0.86	-1.2
2,765,536	+		LRK53_RS12475	0.86	-1.4
2,765,536	+		LRK53_RS12475	0.86	-0.1
2,765,536	+		LRK53_RS12475	0.86	-1.7
2,765,536	+		LRK53_RS12475	0.86	-0.3
2,765,536	+		LRK53_RS12475	0.86	-0.5
2,765,536	+		LRK53_RS12475	0.86	-1.0
2,765,536	+		LRK53_RS12475	0.86	-0.7
2,765,536	+		LRK53_RS12475	0.86	-1.3
2,765,536	+		LRK53_RS12475	0.86	+0.4
2,765,536	+		LRK53_RS12475	0.86	-0.7
2,765,536	+		LRK53_RS12475	0.86	-0.8
2,765,536	+		LRK53_RS12475	0.86	+1.4
2,765,536	+		LRK53_RS12475	0.86	-0.1
2,765,536	+		LRK53_RS12475	0.86	-0.7
2,765,536	+		LRK53_RS12475	0.86	-1.0
2,765,536	+		LRK53_RS12475	0.86	-1.5
2,765,536	+		LRK53_RS12475	0.86	-0.4
2,765,536	+		LRK53_RS12475	0.86	+0.2
2,765,536	+		LRK53_RS12475	0.86	+0.6
2,765,536	+		LRK53_RS12475	0.86	-1.4
2,765,536	+		LRK53_RS12475	0.86	+1.1
2,765,536	+		LRK53_RS12475	0.86	-0.6
2,765,536	+		LRK53_RS12475	0.86	-0.3
2,765,536	+		LRK53_RS12475	0.86	-1.5
2,765,536	+		LRK53_RS12475	0.86	-0.8
2,765,536	+		LRK53_RS12475	0.86	-1.2
2,765,536	+		LRK53_RS12475	0.86	-0.1
2,765,536	+		LRK53_RS12475	0.86	+0.1
2,765,536	+		LRK53_RS12475	0.86	-0.1
2,765,536	+		LRK53_RS12475	0.86	-1.6
2,765,536	+		LRK53_RS12475	0.86	+1.8
2,765,536	+		LRK53_RS12475	0.86	-1.4
2,765,536	+		LRK53_RS12475	0.86	-0.3
2,765,536	+		LRK53_RS12475	0.86	-0.5
2,765,536	+		LRK53_RS12475	0.86	-0.4
2,765,536	+		LRK53_RS12475	0.86	+0.7
2,765,536	+		LRK53_RS12475	0.86	-1.6
2,765,537	-		LRK53_RS12475	0.86	+0.3
2,765,537	-		LRK53_RS12475	0.86	-0.7
2,765,537	-		LRK53_RS12475	0.86	-0.5
2,765,537	-		LRK53_RS12475	0.86	-0.4
2,765,537	-		LRK53_RS12475	0.86	-2.3
2,765,537	-		LRK53_RS12475	0.86	+0.3
2,765,537	-		LRK53_RS12475	0.86	-0.8
2,765,537	-		LRK53_RS12475	0.86	-1.7
2,765,537	-		LRK53_RS12475	0.86	-0.6
2,765,537	-		LRK53_RS12475	0.86	-0.3
2,765,537	-		LRK53_RS12475	0.86	-0.3
2,765,537	-		LRK53_RS12475	0.86	-1.4
2,765,537	-		LRK53_RS12475	0.86	-1.2
2,765,537	-		LRK53_RS12475	0.86	-0.7
2,765,537	-		LRK53_RS12475	0.86	-0.1
2,765,537	-		LRK53_RS12475	0.86	-1.2
2,765,537	-		LRK53_RS12475	0.86	+2.6
2,765,537	-		LRK53_RS12475	0.86	+1.8
2,765,537	-		LRK53_RS12475	0.86	-1.2
2,765,537	-		LRK53_RS12475	0.86	-1.0
2,765,537	-		LRK53_RS12475	0.86	-0.0
2,765,537	-		LRK53_RS12475	0.86	+0.5
2,765,537	-		LRK53_RS12475	0.86	-0.7
2,765,537	-		LRK53_RS12475	0.86	-0.6
2,765,537	-		LRK53_RS12475	0.86	-1.2
2,765,537	-		LRK53_RS12475	0.86	-2.6
2,765,537	-		LRK53_RS12475	0.86	+0.9
2,765,537	-		LRK53_RS12475	0.86	-0.7
2,765,537	-		LRK53_RS12475	0.86	-0.6
2,765,537	-		LRK53_RS12475	0.86	-1.6
2,765,537	-		LRK53_RS12475	0.86	+0.6
2,765,542	+		LRK53_RS12475	0.88	-0.5
2,765,542	+		LRK53_RS12475	0.88	-0.3
2,765,543	-		LRK53_RS12475	0.88	-0.4
2,765,543	-		LRK53_RS12475	0.88	-0.5
2,765,543	-		LRK53_RS12475	0.88	-0.8
2,765,543	-		LRK53_RS12475	0.88	-0.3
2,765,543	-		LRK53_RS12475	0.88	-1.1
2,765,575	+				-0.7
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2,765,824	+		LRK53_RS12480	0.10	+0.8
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2,766,197	-		LRK53_RS12480	0.33	+1.3