Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09045

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
2,021,496	-		LRK53_RS09035	0.74	-1.1
2,021,496	-		LRK53_RS09035	0.74	-0.1
2,021,496	-		LRK53_RS09035	0.74	+0.2
2,021,496	-		LRK53_RS09035	0.74	-0.4
2,021,496	-		LRK53_RS09035	0.74	-1.1
2,021,611	+		LRK53_RS09035	0.88	-0.4
2,021,611	+		LRK53_RS09035	0.88	+0.5
2,021,612	-		LRK53_RS09035	0.88	-1.9
2,021,612	-		LRK53_RS09035	0.88	-2.0
2,021,612	-		LRK53_RS09035	0.88	-2.1
2,021,612	-		LRK53_RS09035	0.88	+0.3
2,021,612	-		LRK53_RS09035	0.88	-2.6
2,021,612	-		LRK53_RS09035	0.88	-0.9
2,021,614	-		LRK53_RS09035	0.89	-2.2
2,021,629	+				-1.1
2,021,629	+				-0.4
2,021,629	+				+1.1
2,021,629	+				-1.0
2,021,630	-				+1.2
2,021,630	-				+1.1
2,021,630	-				-0.1
2,021,630	-				-2.4
2,021,768	-				-0.5
2,021,768	-				-2.4
2,022,123	+		LRK53_RS09040	0.52	-2.6
2,022,124	-		LRK53_RS09040	0.52	+1.4
2,022,124	-		LRK53_RS09040	0.52	-1.6
2,022,124	-		LRK53_RS09040	0.52	+0.9
2,022,130	-		LRK53_RS09040	0.53	-0.1
2,022,313	+		LRK53_RS09040	0.76	-3.5
2,022,313	+		LRK53_RS09040	0.76	-0.4
2,022,313	+		LRK53_RS09040	0.76	+1.8
2,022,314	-		LRK53_RS09040	0.76	-2.7
2,022,314	-		LRK53_RS09040	0.76	+0.5
2,022,366	+		LRK53_RS09040	0.83	-0.1
2,022,366	+		LRK53_RS09040	0.83	+0.1
2,022,366	+		LRK53_RS09040	0.83	-0.3
2,022,367	-		LRK53_RS09040	0.83	+0.2
2,022,367	-		LRK53_RS09040	0.83	-0.1
2,022,367	-		LRK53_RS09040	0.83	+0.5
2,022,367	-		LRK53_RS09040	0.83	-0.7
2,022,367	-		LRK53_RS09040	0.83	-0.3
2,022,371	+		LRK53_RS09040	0.83	+0.1
2,022,371	+		LRK53_RS09040	0.83	-2.2
2,022,371	+		LRK53_RS09040	0.83	-0.7
2,022,372	-		LRK53_RS09040	0.83	-1.7
2,022,372	-		LRK53_RS09040	0.83	-0.8
2,022,372	-		LRK53_RS09040	0.83	+3.2
2,022,372	-		LRK53_RS09040	0.83	-1.3
2,022,372	-		LRK53_RS09040	0.83	+0.5
2,022,372	-		LRK53_RS09040	0.83	-0.9
2,022,372	-		LRK53_RS09040	0.83	+2.0
2,022,439	+				-1.6
2,022,501	+				-0.8
2,022,502	-				-1.6
2,022,502	-				-1.5
2,022,502	-				-2.1
2,022,536	+				+0.2
2,022,536	+				-1.1
2,022,536	+				-0.9
2,022,536	+				-3.6
2,022,537	-				-0.0
2,022,537	-				-0.1
2,022,537	-				-0.4
2,022,745	+		LRK53_RS09045	0.32	+0.3
2,022,745	+		LRK53_RS09045	0.32	+0.5
2,022,745	+		LRK53_RS09045	0.32	-0.8
2,022,745	+		LRK53_RS09045	0.32	-1.4
2,022,745	+		LRK53_RS09045	0.32	-3.1
2,022,745	+		LRK53_RS09045	0.32	-1.4
2,022,745	+		LRK53_RS09045	0.32	+1.3
2,022,745	+		LRK53_RS09045	0.32	-0.8
2,022,745	+		LRK53_RS09045	0.32	-1.8
2,022,745	+		LRK53_RS09045	0.32	-1.3
2,022,745	+		LRK53_RS09045	0.32	-1.5
2,022,745	+		LRK53_RS09045	0.32	-1.6
2,022,745	+		LRK53_RS09045	0.32	+0.1
2,022,745	+		LRK53_RS09045	0.32	-1.7
2,022,745	+		LRK53_RS09045	0.32	-0.3
2,022,746	-		LRK53_RS09045	0.32	-1.2
2,022,746	-		LRK53_RS09045	0.32	-0.1
2,022,746	-		LRK53_RS09045	0.32	-0.4
2,022,746	-		LRK53_RS09045	0.32	-0.5
2,023,038	+		LRK53_RS09045	0.69	+0.5
2,023,038	+		LRK53_RS09045	0.69	-2.4
2,023,039	-		LRK53_RS09045	0.69	-2.3
2,023,116	+		LRK53_RS09045	0.79	-0.8
2,023,116	+		LRK53_RS09045	0.79	-0.9
2,023,117	-		LRK53_RS09045	0.79	-1.0
2,023,153	+		LRK53_RS09045	0.84	-1.4
2,023,272	+				-2.7
2,023,272	+				-2.4
2,023,273	-				-3.2
2,023,300	-				+0.2
2,023,353	+				+0.2
2,023,353	+				-1.5
2,023,353	+				-1.3
2,023,354	-				-1.6
2,023,354	-				+1.7
2,023,400	-		LRK53_RS09050	0.17	+0.3
2,023,464	+		LRK53_RS09050	0.28	-0.5
2,023,465	-		LRK53_RS09050	0.28	-0.5
2,023,465	-		LRK53_RS09050	0.28	-0.7
2,023,465	-		LRK53_RS09050	0.28	-0.2
2,023,486	+		LRK53_RS09050	0.32	-1.9
2,023,486	+		LRK53_RS09050	0.32	-0.7
2,023,486	+		LRK53_RS09050	0.32	+2.0
2,023,486	+		LRK53_RS09050	0.32	-1.2
2,023,486	+		LRK53_RS09050	0.32	-0.7
2,023,486	+		LRK53_RS09050	0.32	+1.0
2,023,487	-		LRK53_RS09050	0.32	-0.5
2,023,487	-		LRK53_RS09050	0.32	-1.1
2,023,487	-		LRK53_RS09050	0.32	-0.0
2,023,487	-		LRK53_RS09050	0.32	-1.1
2,023,487	-		LRK53_RS09050	0.32	-0.9
2,023,487	-		LRK53_RS09050	0.32	-1.5
2,023,487	-		LRK53_RS09050	0.32	-1.2
2,023,487	-		LRK53_RS09050	0.32	-0.9
2,023,487	-		LRK53_RS09050	0.32	-1.4
2,023,487	-		LRK53_RS09050	0.32	-0.3
2,023,487	-		LRK53_RS09050	0.32	-0.7
2,023,487	-		LRK53_RS09050	0.32	-0.9
2,023,660	+		LRK53_RS09050	0.61	-2.7
2,023,660	+		LRK53_RS09050	0.61	-1.1
2,023,660	+		LRK53_RS09050	0.61	-1.8
2,023,661	-		LRK53_RS09050	0.61	-0.3
2,023,661	-		LRK53_RS09050	0.61	-0.8
2,023,661	-		LRK53_RS09050	0.61	+0.1
2,023,775	+		LRK53_RS09050	0.81	-0.2
2,023,775	+		LRK53_RS09050	0.81	+0.2
2,023,775	+		LRK53_RS09050	0.81	-3.8
2,023,775	+		LRK53_RS09050	0.81	+0.7
2,023,775	+		LRK53_RS09050	0.81	-2.0
2,023,775	+		LRK53_RS09050	0.81	-1.1
2,023,775	+		LRK53_RS09050	0.81	-0.7
2,023,775	+		LRK53_RS09050	0.81	+1.2
2,023,775	+		LRK53_RS09050	0.81	-2.1
2,023,776	-		LRK53_RS09050	0.81	-0.5
2,023,776	-		LRK53_RS09050	0.81	-0.1
2,023,776	-		LRK53_RS09050	0.81	-0.9
2,023,776	-		LRK53_RS09050	0.81	-2.4
2,023,776	-		LRK53_RS09050	0.81	-1.9
2,023,776	-		LRK53_RS09050	0.81	-0.1
2,023,776	-		LRK53_RS09050	0.81	-0.8
2,023,776	-		LRK53_RS09050	0.81	-1.3
2,023,776	-		LRK53_RS09050	0.81	+1.6
2,023,950	+				-1.2
2,023,950	+				-0.4
2,023,950	+				+0.3
2,023,950	+				-1.1
2,023,950	+				-2.2
2,023,950	+				-2.2
2,023,950	+				+1.0
2,023,950	+				-0.9
2,023,950	+				-1.1
2,023,950	+				-1.1
2,023,950	+				+0.4
2,023,950	+				-1.4
2,023,950	+				-1.2
2,023,950	+				+0.7
2,023,950	+				-3.0
2,023,950	+				-1.2
2,023,950	+				+0.2
2,023,950	+				+0.8
2,023,951	-				+0.6
2,023,951	-				-2.8
2,023,951	-				-0.3
2,023,951	-				+0.6
2,023,951	-				+1.9
2,023,951	-				-0.8
2,023,951	-				+2.0
2,023,951	-				+0.9
2,024,108	+		LRK53_RS09055	0.38	-0.5
2,024,108	+		LRK53_RS09055	0.38	+0.5
2,024,108	+		LRK53_RS09055	0.38	+0.9
2,024,108	+		LRK53_RS09055	0.38	-1.5
2,024,108	+		LRK53_RS09055	0.38	-1.4
2,024,108	+		LRK53_RS09055	0.38	-0.3
2,024,108	+		LRK53_RS09055	0.38	-0.5
2,024,108	+		LRK53_RS09055	0.38	+0.3
2,024,108	+		LRK53_RS09055	0.38	-1.1
2,024,108	+		LRK53_RS09055	0.38	+1.3
2,024,108	+		LRK53_RS09055	0.38	-1.1
2,024,108	+		LRK53_RS09055	0.38	+0.0
2,024,108	+		LRK53_RS09055	0.38	-1.1
2,024,108	+		LRK53_RS09055	0.38	-0.6
2,024,108	+		LRK53_RS09055	0.38	-0.8
2,024,109	-		LRK53_RS09055	0.39	-1.9
2,024,109	-		LRK53_RS09055	0.39	+2.3
2,024,109	-		LRK53_RS09055	0.39	+0.7
2,024,109	-		LRK53_RS09055	0.39	+0.9
2,024,109	-		LRK53_RS09055	0.39	+0.1
2,024,109	-		LRK53_RS09055	0.39	-0.8
2,024,109	-		LRK53_RS09055	0.39	+2.1
2,024,109	-		LRK53_RS09055	0.39	-1.3
2,024,109	-		LRK53_RS09055	0.39	-0.3
2,024,109	-		LRK53_RS09055	0.39	+0.9
2,024,109	-		LRK53_RS09055	0.39	-0.4
2,024,109	-		LRK53_RS09055	0.39	-1.4
2,024,109	-		LRK53_RS09055	0.39	+0.6
2,024,109	-		LRK53_RS09055	0.39	-1.3
2,024,109	-		LRK53_RS09055	0.39	-1.1
2,024,109	-		LRK53_RS09055	0.39	-0.3
2,024,109	-		LRK53_RS09055	0.39	-0.9
2,024,109	-		LRK53_RS09055	0.39	-1.3
2,024,109	-		LRK53_RS09055	0.39	-0.8
2,024,138	+		LRK53_RS09055	0.50	-2.0
2,024,138	+		LRK53_RS09055	0.50	-0.6
2,024,139	-		LRK53_RS09055	0.50	+0.4
2,024,139	-		LRK53_RS09055	0.50	-0.7
2,024,139	-		LRK53_RS09055	0.50	-0.9
2,024,265	-				-1.1
2,024,271	+				+0.5
2,024,272	-				-1.2