Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08675

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
1,946,391	-		LRK53_RS08660	0.56	-0.3
1,946,391	-		LRK53_RS08660	0.56	-1.3
1,946,391	-		LRK53_RS08660	0.56	-0.2
1,946,391	-		LRK53_RS08660	0.56	-1.3
1,946,391	-		LRK53_RS08660	0.56	-0.3
1,946,425	+		LRK53_RS08660	0.63	+0.1
1,946,425	+		LRK53_RS08660	0.63	-1.7
1,946,425	+		LRK53_RS08660	0.63	+0.2
1,946,425	+		LRK53_RS08660	0.63	-0.7
1,946,425	+		LRK53_RS08660	0.63	-1.6
1,946,426	-		LRK53_RS08660	0.63	-2.3
1,946,552	+				-1.3
1,946,552	+				+0.2
1,946,552	+				+1.2
1,946,552	+				-0.9
1,946,552	+				-0.8
1,946,552	+				-2.0
1,946,552	+				+0.4
1,946,552	+				-1.0
1,946,552	+				+0.7
1,946,552	+				-2.0
1,946,552	+				+2.9
1,946,552	+				-2.1
1,946,553	-				+1.7
1,946,553	-				-0.7
1,946,553	-				+0.6
1,946,553	-				-2.7
1,946,553	-				-2.0
1,946,553	-				+0.1
1,946,553	-				+0.2
1,946,553	-				-2.4
1,946,575	+				+2.6
1,946,575	+				-0.4
1,946,576	-				+1.0
1,946,576	-				-1.5
1,946,576	-				-0.6
1,946,650	+		LRK53_RS08665	0.29	+0.7
1,946,752	+		LRK53_RS08665	0.79	-0.5
1,946,752	+		LRK53_RS08665	0.79	-1.6
1,946,752	+		LRK53_RS08665	0.79	-1.5
1,946,753	-		LRK53_RS08665	0.79	-0.1
1,946,753	-		LRK53_RS08665	0.79	-0.4
1,946,794	+				+0.6
1,946,794	+				-0.8
1,946,794	+				-3.2
1,946,795	-				-0.8
1,946,795	-				-2.4
1,946,795	-				+1.0
1,946,795	-				-0.8
1,946,809	+				-1.1
1,946,928	+				+0.8
1,946,928	+				+0.7
1,946,929	-				+1.2
1,946,929	-				-1.6
1,946,929	-				-0.8
1,946,929	-				+0.1
1,947,001	+		LRK53_RS08670	0.18	-0.7
1,947,001	+		LRK53_RS08670	0.18	-1.4
1,947,001	+		LRK53_RS08670	0.18	-0.7
1,947,001	+		LRK53_RS08670	0.18	-1.0
1,947,002	-		LRK53_RS08670	0.19	-1.3
1,947,002	-		LRK53_RS08670	0.19	-0.9
1,947,058	+		LRK53_RS08670	0.32	-1.0
1,947,059	-		LRK53_RS08670	0.32	-0.3
1,947,059	-		LRK53_RS08670	0.32	-0.4
1,947,059	-		LRK53_RS08670	0.32	-0.1
1,947,528	+				+0.6
1,947,528	+				+0.1
1,947,528	+				+0.0
1,947,528	+				-0.0
1,947,528	+				-0.8
1,947,528	+				-0.7
1,947,528	+				-1.3
1,947,528	+				-0.8
1,947,528	+				+0.5
1,947,528	+				-2.0
1,947,528	+				+1.0
1,947,528	+				+1.6
1,947,528	+				-1.0
1,947,529	-				+0.0
1,947,529	-				-0.9
1,947,529	-				-1.7
1,947,529	-				-0.8
1,947,529	-				-0.5
1,947,529	-				-0.9
1,947,529	-				-0.5
1,947,529	-				-2.3
1,947,529	-				-2.7
1,947,786	+		LRK53_RS08675	0.16	-1.1
1,947,786	+		LRK53_RS08675	0.16	+0.9
1,947,786	+		LRK53_RS08675	0.16	-1.3
1,947,786	+		LRK53_RS08675	0.16	-0.5
1,947,786	+		LRK53_RS08675	0.16	-0.1
1,947,787	-		LRK53_RS08675	0.16	-1.3
1,947,787	-		LRK53_RS08675	0.16	-0.0
1,947,787	-		LRK53_RS08675	0.16	-1.1
1,947,787	-		LRK53_RS08675	0.16	-0.3
1,947,813	+		LRK53_RS08675	0.17	-0.6
1,947,813	+		LRK53_RS08675	0.17	-0.6
1,947,813	+		LRK53_RS08675	0.17	-2.5
1,947,813	+		LRK53_RS08675	0.17	-0.0
1,947,813	+		LRK53_RS08675	0.17	-1.4
1,947,813	+		LRK53_RS08675	0.17	-1.4
1,947,813	+		LRK53_RS08675	0.17	+0.6
1,947,814	-		LRK53_RS08675	0.18	-0.2
1,947,814	-		LRK53_RS08675	0.18	-1.5
1,947,814	-		LRK53_RS08675	0.18	-0.2
1,947,814	-		LRK53_RS08675	0.18	-0.7
1,947,814	-		LRK53_RS08675	0.18	-0.5
1,947,814	-		LRK53_RS08675	0.18	+1.2
1,947,867	+		LRK53_RS08675	0.19	+0.0
1,947,867	+		LRK53_RS08675	0.19	-2.1
1,947,915	+		LRK53_RS08675	0.21	-0.0
1,947,915	+		LRK53_RS08675	0.21	+0.6
1,947,915	+		LRK53_RS08675	0.21	+1.7
1,947,915	+		LRK53_RS08675	0.21	+0.2
1,947,915	+		LRK53_RS08675	0.21	+0.2
1,947,915	+		LRK53_RS08675	0.21	-2.4
1,947,915	+		LRK53_RS08675	0.21	+0.8
1,947,915	+		LRK53_RS08675	0.21	-0.6
1,947,915	+		LRK53_RS08675	0.21	+0.1
1,947,915	+		LRK53_RS08675	0.21	+0.4
1,947,915	+		LRK53_RS08675	0.21	+0.4
1,947,915	+		LRK53_RS08675	0.21	-1.1
1,947,915	+		LRK53_RS08675	0.21	+1.7
1,947,915	+		LRK53_RS08675	0.21	-0.8
1,947,915	+		LRK53_RS08675	0.21	-0.2
1,947,915	+		LRK53_RS08675	0.21	-0.8
1,947,915	+		LRK53_RS08675	0.21	-1.4
1,947,915	+		LRK53_RS08675	0.21	+1.8
1,947,915	+		LRK53_RS08675	0.21	-0.4
1,947,915	+		LRK53_RS08675	0.21	-0.3
1,947,915	+		LRK53_RS08675	0.21	+0.3
1,947,915	+		LRK53_RS08675	0.21	-0.7
1,947,915	+		LRK53_RS08675	0.21	-1.1
1,947,915	+		LRK53_RS08675	0.21	+0.1
1,947,915	+		LRK53_RS08675	0.21	-2.0
1,947,915	+		LRK53_RS08675	0.21	-0.2
1,947,915	+		LRK53_RS08675	0.21	-0.8
1,947,915	+		LRK53_RS08675	0.21	-1.0
1,947,915	+		LRK53_RS08675	0.21	-1.4
1,947,915	+		LRK53_RS08675	0.21	+0.2
1,947,916	-		LRK53_RS08675	0.21	-0.8
1,947,916	-		LRK53_RS08675	0.21	-1.0
1,947,916	-		LRK53_RS08675	0.21	-3.4
1,947,916	-		LRK53_RS08675	0.21	-0.4
1,947,916	-		LRK53_RS08675	0.21	+1.2
1,947,916	-		LRK53_RS08675	0.21	+1.7
1,947,916	-		LRK53_RS08675	0.21	-2.6
1,947,916	-		LRK53_RS08675	0.21	-0.8
1,947,916	-		LRK53_RS08675	0.21	-0.4
1,947,916	-		LRK53_RS08675	0.21	-1.8
1,947,916	-		LRK53_RS08675	0.21	-0.3
1,947,916	-		LRK53_RS08675	0.21	+0.2
1,947,916	-		LRK53_RS08675	0.21	+0.6
1,947,916	-		LRK53_RS08675	0.21	-1.6
1,947,916	-		LRK53_RS08675	0.21	+0.4
1,947,916	-		LRK53_RS08675	0.21	+2.5
1,947,916	-		LRK53_RS08675	0.21	-1.0
1,947,916	-		LRK53_RS08675	0.21	-1.9
1,947,916	-		LRK53_RS08675	0.21	+0.4
1,947,916	-		LRK53_RS08675	0.21	-0.3
1,947,916	-		LRK53_RS08675	0.21	-0.5
1,947,916	-		LRK53_RS08675	0.21	-0.3
1,947,916	-		LRK53_RS08675	0.21	-1.5
1,947,916	-		LRK53_RS08675	0.21	-2.1
1,947,916	-		LRK53_RS08675	0.21	-1.6
1,947,916	-		LRK53_RS08675	0.21	-0.0
1,947,916	-		LRK53_RS08675	0.21	-1.0
1,947,916	-		LRK53_RS08675	0.21	-0.4
1,947,916	-		LRK53_RS08675	0.21	+1.6
1,947,916	-		LRK53_RS08675	0.21	+0.2
1,947,917	+		LRK53_RS08675	0.21	-1.2
1,947,917	+		LRK53_RS08675	0.21	-0.2
1,947,917	+		LRK53_RS08675	0.21	-0.4
1,947,917	+		LRK53_RS08675	0.21	-0.7
1,947,917	+		LRK53_RS08675	0.21	-0.7
1,947,917	+		LRK53_RS08675	0.21	-1.2
1,947,917	+		LRK53_RS08675	0.21	+0.3
1,947,917	+		LRK53_RS08675	0.21	-2.3
1,947,918	-		LRK53_RS08675	0.21	+1.8
1,947,918	-		LRK53_RS08675	0.21	-1.8
1,947,918	-		LRK53_RS08675	0.21	+1.1
1,947,918	-		LRK53_RS08675	0.21	-2.3
1,947,918	-		LRK53_RS08675	0.21	+1.5
1,947,918	-		LRK53_RS08675	0.21	-1.7
1,947,918	-		LRK53_RS08675	0.21	-1.3
1,947,918	-		LRK53_RS08675	0.21	-1.8
1,947,918	-		LRK53_RS08675	0.21	-1.6
1,948,251	+		LRK53_RS08675	0.34	-1.9
1,948,251	+		LRK53_RS08675	0.34	-1.8
1,948,251	+		LRK53_RS08675	0.34	-0.3
1,948,251	+		LRK53_RS08675	0.34	-2.0
1,948,251	+		LRK53_RS08675	0.34	-1.4
1,948,251	+		LRK53_RS08675	0.34	+0.4
1,948,251	+		LRK53_RS08675	0.34	-1.0
1,948,251	+		LRK53_RS08675	0.34	-0.4
1,948,251	+		LRK53_RS08675	0.34	-1.0
1,948,251	+		LRK53_RS08675	0.34	+0.4
1,948,251	+		LRK53_RS08675	0.34	-2.6
1,948,251	+		LRK53_RS08675	0.34	-1.6
1,948,251	+		LRK53_RS08675	0.34	-1.2
1,948,251	+		LRK53_RS08675	0.34	-1.3
1,948,251	+		LRK53_RS08675	0.34	-1.0
1,948,251	+		LRK53_RS08675	0.34	-0.8
1,948,251	+		LRK53_RS08675	0.34	+0.6
1,948,251	+		LRK53_RS08675	0.34	-0.0
1,948,251	+		LRK53_RS08675	0.34	-2.3
1,948,251	+		LRK53_RS08675	0.34	+0.0
1,948,251	+		LRK53_RS08675	0.34	+0.6
1,948,251	+		LRK53_RS08675	0.34	-1.9
1,948,251	+		LRK53_RS08675	0.34	-2.1
1,948,251	+		LRK53_RS08675	0.34	+1.5
1,948,251	+		LRK53_RS08675	0.34	-1.3
1,948,251	+		LRK53_RS08675	0.34	-0.7
1,948,252	-		LRK53_RS08675	0.34	-1.0
1,948,252	-		LRK53_RS08675	0.34	-1.0
1,948,252	-		LRK53_RS08675	0.34	+0.3
1,948,252	-		LRK53_RS08675	0.34	-0.7
1,948,252	-		LRK53_RS08675	0.34	-1.1
1,948,252	-		LRK53_RS08675	0.34	-0.1
1,948,252	-		LRK53_RS08675	0.34	-2.1
1,948,252	-		LRK53_RS08675	0.34	-3.1
1,948,252	-		LRK53_RS08675	0.34	-0.8
1,948,252	-		LRK53_RS08675	0.34	-0.1
1,948,252	-		LRK53_RS08675	0.34	-0.7
1,948,252	-		LRK53_RS08675	0.34	-0.2
1,948,252	-		LRK53_RS08675	0.34	+0.0
1,948,252	-		LRK53_RS08675	0.34	-0.5
1,948,252	-		LRK53_RS08675	0.34	-0.3
1,948,252	-		LRK53_RS08675	0.34	+0.5
1,948,252	-		LRK53_RS08675	0.34	-0.0
1,948,252	-		LRK53_RS08675	0.34	+0.7
1,948,252	-		LRK53_RS08675	0.34	+1.3
1,948,252	-		LRK53_RS08675	0.34	+1.0
1,948,290	+		LRK53_RS08675	0.35	+1.7
1,948,290	+		LRK53_RS08675	0.35	+0.2
1,948,291	-		LRK53_RS08675	0.35	-1.1
1,948,291	-		LRK53_RS08675	0.35	-1.2
1,948,291	-		LRK53_RS08675	0.35	-1.2
1,948,291	-		LRK53_RS08675	0.35	-2.3
1,948,291	-		LRK53_RS08675	0.35	+0.4
1,948,365	+		LRK53_RS08675	0.38	+0.2
1,948,365	+		LRK53_RS08675	0.38	-0.3
1,948,365	+		LRK53_RS08675	0.38	-1.0
1,948,365	+		LRK53_RS08675	0.38	-0.1
1,948,366	-		LRK53_RS08675	0.38	+0.2
1,948,366	-		LRK53_RS08675	0.38	-1.3
1,948,366	-		LRK53_RS08675	0.38	-3.1
1,948,366	-		LRK53_RS08675	0.38	+1.0
1,948,366	-		LRK53_RS08675	0.38	-1.4
1,949,874	+				-1.2
1,949,874	+				-1.0
1,949,874	+				+0.0
1,949,874	+				-0.5
1,949,874	+				-0.8
1,949,874	+				-1.4
1,949,874	+				-1.3
1,949,874	+				-0.1
1,949,875	-				+2.1
1,949,875	-				+0.7
1,949,875	-				-1.4
1,949,875	-				+0.3
1,949,875	-				-1.4
1,949,875	-				-1.0
1,949,875	-				-0.8
1,949,875	-				-1.0
1,949,875	-				-0.8
1,949,913	+				-1.3
1,949,913	+				-0.1
1,949,914	-				-0.1
1,949,914	-				+0.5
1,950,086	+				-0.7
1,950,087	-				+0.7
1,950,136	-				-1.6