Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08550

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
1,918,633	+		LRK53_RS08545	0.58	+0.1
1,918,633	+		LRK53_RS08545	0.58	-0.2
1,918,633	+		LRK53_RS08545	0.58	-1.4
1,918,884	+		LRK53_RS08545	0.81	+0.8
1,918,884	+		LRK53_RS08545	0.81	-1.1
1,918,884	+		LRK53_RS08545	0.81	-0.6
1,918,884	+		LRK53_RS08545	0.81	-0.5
1,918,884	+		LRK53_RS08545	0.81	+0.4
1,918,884	+		LRK53_RS08545	0.81	-1.2
1,918,884	+		LRK53_RS08545	0.81	-2.3
1,918,884	+		LRK53_RS08545	0.81	+2.0
1,918,884	+		LRK53_RS08545	0.81	-1.9
1,918,884	+		LRK53_RS08545	0.81	-2.7
1,918,884	+		LRK53_RS08545	0.81	-1.1
1,918,884	+		LRK53_RS08545	0.81	+0.7
1,918,884	+		LRK53_RS08545	0.81	-1.1
1,918,884	+		LRK53_RS08545	0.81	+1.1
1,918,884	+		LRK53_RS08545	0.81	-0.3
1,918,884	+		LRK53_RS08545	0.81	+0.6
1,918,884	+		LRK53_RS08545	0.81	-0.2
1,918,884	+		LRK53_RS08545	0.81	-1.7
1,918,884	+		LRK53_RS08545	0.81	+0.9
1,918,884	+		LRK53_RS08545	0.81	+0.7
1,918,884	+		LRK53_RS08545	0.81	+0.2
1,918,884	+		LRK53_RS08545	0.81	+0.2
1,918,884	+		LRK53_RS08545	0.81	-0.2
1,918,885	-		LRK53_RS08545	0.81	-1.0
1,918,885	-		LRK53_RS08545	0.81	+0.1
1,918,885	-		LRK53_RS08545	0.81	-0.4
1,918,885	-		LRK53_RS08545	0.81	-0.3
1,918,885	-		LRK53_RS08545	0.81	-0.5
1,918,885	-		LRK53_RS08545	0.81	-0.1
1,918,885	-		LRK53_RS08545	0.81	-1.2
1,918,885	-		LRK53_RS08545	0.81	+0.3
1,918,885	-		LRK53_RS08545	0.81	-0.3
1,918,885	-		LRK53_RS08545	0.81	+0.3
1,918,885	-		LRK53_RS08545	0.81	+1.4
1,918,885	-		LRK53_RS08545	0.81	+1.0
1,918,885	-		LRK53_RS08545	0.81	-1.6
1,918,885	-		LRK53_RS08545	0.81	-2.9
1,918,885	-		LRK53_RS08545	0.81	-0.4
1,918,885	-		LRK53_RS08545	0.81	+0.8
1,918,885	-		LRK53_RS08545	0.81	-0.1
1,918,885	-		LRK53_RS08545	0.81	-1.8
1,918,885	-		LRK53_RS08545	0.81	+1.1
1,918,885	-		LRK53_RS08545	0.81	-0.7
1,918,885	-		LRK53_RS08545	0.81	-0.8
1,918,885	-		LRK53_RS08545	0.81	-1.1
1,918,885	-		LRK53_RS08545	0.81	+0.5
1,918,885	-		LRK53_RS08545	0.81	+0.1
1,918,885	-		LRK53_RS08545	0.81	-2.7
1,918,885	-		LRK53_RS08545	0.81	-0.5
1,918,885	-		LRK53_RS08545	0.81	-1.2
1,918,885	-		LRK53_RS08545	0.81	-0.4
1,918,885	-		LRK53_RS08545	0.81	-0.7
1,918,885	-		LRK53_RS08545	0.81	-0.7
1,918,885	-		LRK53_RS08545	0.81	+0.0
1,918,885	-		LRK53_RS08545	0.81	-0.2
1,918,885	-		LRK53_RS08545	0.81	-1.1
1,918,885	-		LRK53_RS08545	0.81	+0.0
1,918,885	-		LRK53_RS08545	0.81	-1.5
1,918,885	-		LRK53_RS08545	0.81	-0.7
1,918,885	-		LRK53_RS08545	0.81	-0.8
1,918,941	+		LRK53_RS08545	0.86	-0.3
1,918,941	+		LRK53_RS08545	0.86	-0.4
1,918,941	+		LRK53_RS08545	0.86	+0.4
1,918,941	+		LRK53_RS08545	0.86	-1.8
1,918,975	+		LRK53_RS08545	0.90	+1.4
1,918,975	+		LRK53_RS08545	0.90	-0.3
1,918,975	+		LRK53_RS08545	0.90	-1.6
1,918,975	+		LRK53_RS08545	0.90	+0.3
1,918,975	+		LRK53_RS08545	0.90	-1.9
1,918,975	+		LRK53_RS08545	0.90	-1.1
1,918,975	+		LRK53_RS08545	0.90	+1.2
1,918,976	-		LRK53_RS08545	0.90	+0.0
1,918,976	-		LRK53_RS08545	0.90	-0.9
1,918,976	-		LRK53_RS08545	0.90	-1.1
1,918,976	-		LRK53_RS08545	0.90	-3.2
1,918,976	-		LRK53_RS08545	0.90	-0.2
1,918,976	-		LRK53_RS08545	0.90	-1.6
1,918,997	+				-1.7
1,919,095	+				-1.2
1,919,095	+				-2.3
1,919,095	+				-1.3
1,919,095	+				-1.9
1,919,096	-				-0.0
1,919,096	-				-2.8
1,919,221	+				-1.1
1,919,221	+				-0.8
1,919,222	-				-1.0
1,919,222	-				-2.8
1,919,222	-				-1.7
1,919,492	+				-0.5
1,919,493	-				-1.4
1,919,937	-		LRK53_RS08550	0.26	-0.7
1,920,044	+		LRK53_RS08550	0.32	-0.5
1,920,044	+		LRK53_RS08550	0.32	-1.1
1,920,045	-		LRK53_RS08550	0.32	-2.3
1,920,170	+		LRK53_RS08550	0.39	-2.0
1,920,170	+		LRK53_RS08550	0.39	+0.7
1,920,171	-		LRK53_RS08550	0.39	-2.6
1,920,171	-		LRK53_RS08550	0.39	+0.1
1,920,213	+		LRK53_RS08550	0.41	-0.1
1,920,263	+		LRK53_RS08550	0.44	-0.4
1,920,263	+		LRK53_RS08550	0.44	-1.2
1,920,263	+		LRK53_RS08550	0.44	+0.6
1,920,264	-		LRK53_RS08550	0.44	-0.2
1,920,264	-		LRK53_RS08550	0.44	+0.5
1,920,264	-		LRK53_RS08550	0.44	-0.1
1,920,264	-		LRK53_RS08550	0.44	-1.2
1,920,269	+		LRK53_RS08550	0.44	-0.0
1,920,269	+		LRK53_RS08550	0.44	+0.5
1,920,270	-		LRK53_RS08550	0.44	+0.4
1,920,270	-		LRK53_RS08550	0.44	-0.3
1,920,270	-		LRK53_RS08550	0.44	-0.5
1,920,270	-		LRK53_RS08550	0.44	-1.7
1,920,270	-		LRK53_RS08550	0.44	-0.6
1,920,270	-		LRK53_RS08550	0.44	-1.9
1,920,284	+		LRK53_RS08550	0.45	-0.6
1,920,284	+		LRK53_RS08550	0.45	-1.1
1,920,284	+		LRK53_RS08550	0.45	-2.0
1,920,284	+		LRK53_RS08550	0.45	-0.2
1,920,284	+		LRK53_RS08550	0.45	+0.4
1,920,284	+		LRK53_RS08550	0.45	-2.5
1,920,284	+		LRK53_RS08550	0.45	-2.7
1,920,284	+		LRK53_RS08550	0.45	+1.5
1,920,284	+		LRK53_RS08550	0.45	-0.3
1,920,285	-		LRK53_RS08550	0.45	-2.3
1,920,285	-		LRK53_RS08550	0.45	-1.0
1,920,285	-		LRK53_RS08550	0.45	+0.4
1,920,285	-		LRK53_RS08550	0.45	-0.9
1,920,285	-		LRK53_RS08550	0.45	-0.1
1,920,285	-		LRK53_RS08550	0.45	-3.0
1,920,285	-		LRK53_RS08550	0.45	-0.2
1,920,285	-		LRK53_RS08550	0.45	+2.2
1,920,285	-		LRK53_RS08550	0.45	+1.5
1,920,285	-		LRK53_RS08550	0.45	-0.0
1,920,285	-		LRK53_RS08550	0.45	-1.7
1,920,299	+		LRK53_RS08550	0.46	-0.1
1,920,299	+		LRK53_RS08550	0.46	+2.1
1,920,299	+		LRK53_RS08550	0.46	+0.6
1,920,299	+		LRK53_RS08550	0.46	+1.2
1,920,300	-		LRK53_RS08550	0.46	+0.4
1,920,300	-		LRK53_RS08550	0.46	-0.3
1,920,300	-		LRK53_RS08550	0.46	-1.5
1,920,300	-		LRK53_RS08550	0.46	-1.5
1,920,300	-		LRK53_RS08550	0.46	+1.0
1,920,300	-		LRK53_RS08550	0.46	-0.5
1,920,300	-		LRK53_RS08550	0.46	-1.9
1,920,300	-		LRK53_RS08550	0.46	+0.8
1,920,300	-		LRK53_RS08550	0.46	-0.6
1,920,300	-		LRK53_RS08550	0.46	-1.0
1,920,365	+		LRK53_RS08550	0.49	-1.7
1,920,365	+		LRK53_RS08550	0.49	-0.6
1,920,365	+		LRK53_RS08550	0.49	+0.4
1,920,365	+		LRK53_RS08550	0.49	-1.7
1,920,365	+		LRK53_RS08550	0.49	+0.8
1,920,365	+		LRK53_RS08550	0.49	-1.1
1,920,365	+		LRK53_RS08550	0.49	+0.6
1,920,365	+		LRK53_RS08550	0.49	+0.0
1,920,365	+		LRK53_RS08550	0.49	+2.1
1,920,366	-		LRK53_RS08550	0.49	-0.8
1,920,366	-		LRK53_RS08550	0.49	+0.8
1,920,366	-		LRK53_RS08550	0.49	-1.7
1,920,366	-		LRK53_RS08550	0.49	-1.5
1,920,366	-		LRK53_RS08550	0.49	-1.0
1,920,366	-		LRK53_RS08550	0.49	+0.4
1,920,366	-		LRK53_RS08550	0.49	-0.6
1,920,366	-		LRK53_RS08550	0.49	+0.6
1,920,366	-		LRK53_RS08550	0.49	-1.7
1,920,366	-		LRK53_RS08550	0.49	-1.2
1,920,434	+		LRK53_RS08550	0.53	-1.7
1,920,434	+		LRK53_RS08550	0.53	-1.8
1,920,435	-		LRK53_RS08550	0.53	-0.3
1,920,452	-		LRK53_RS08550	0.54	-0.8
1,920,452	-		LRK53_RS08550	0.54	+0.7
1,920,452	-		LRK53_RS08550	0.54	+1.3
1,920,452	-		LRK53_RS08550	0.54	-0.7
1,920,512	+		LRK53_RS08550	0.57	-1.7
1,920,617	+		LRK53_RS08550	0.63	-0.4
1,920,617	+		LRK53_RS08550	0.63	+2.3
1,920,617	+		LRK53_RS08550	0.63	+1.1
1,920,617	+		LRK53_RS08550	0.63	-1.7
1,920,617	+		LRK53_RS08550	0.63	+0.8
1,920,618	-		LRK53_RS08550	0.63	-0.5
1,920,618	-		LRK53_RS08550	0.63	+0.4
1,920,618	-		LRK53_RS08550	0.63	+0.1
1,920,764	+		LRK53_RS08550	0.71	+0.2
1,920,764	+		LRK53_RS08550	0.71	-1.2
1,920,764	+		LRK53_RS08550	0.71	+0.9
1,920,764	+		LRK53_RS08550	0.71	-3.1
1,920,765	-		LRK53_RS08550	0.71	+1.4
1,920,867	-		LRK53_RS08550	0.77	-0.5
1,920,867	-		LRK53_RS08550	0.77	-2.0
1,921,037	+		LRK53_RS08550	0.86	-1.3
1,921,037	+		LRK53_RS08550	0.86	-2.4
1,921,037	+		LRK53_RS08550	0.86	-2.8
1,921,037	+		LRK53_RS08550	0.86	-2.0
1,921,037	+		LRK53_RS08550	0.86	-1.4
1,921,037	+		LRK53_RS08550	0.86	-0.4
1,921,038	-		LRK53_RS08550	0.86	+1.8
1,921,038	-		LRK53_RS08550	0.86	-2.2
1,921,038	-		LRK53_RS08550	0.86	-0.6
1,921,038	-		LRK53_RS08550	0.86	-2.7
1,921,038	-		LRK53_RS08550	0.86	-0.4
1,921,038	-		LRK53_RS08550	0.86	+0.4
1,921,038	-		LRK53_RS08550	0.86	-2.7
1,921,038	-		LRK53_RS08550	0.86	-1.0
1,921,038	-		LRK53_RS08550	0.86	-1.3
1,921,039	+		LRK53_RS08550	0.86	-2.5
1,921,384	-				-0.1
1,921,384	-				-0.4
1,921,384	-				-0.5
1,921,476	+				-1.3
1,921,476	+				+2.1
1,921,476	+				-0.9
1,921,491	+				-3.8
1,921,491	+				-1.3
1,921,491	+				-0.1
1,921,492	-				-0.8
1,921,492	-				+0.0
1,921,492	-				+1.1
1,921,492	-				-0.5
1,921,493	+				-1.4
1,921,493	+				-1.4
1,921,493	+				-2.1
1,921,493	+				+0.0
1,921,493	+				-1.4
1,921,493	+				-0.7
1,921,493	+				-1.1
1,921,493	+				+0.1
1,921,493	+				-1.1
1,921,493	+				-0.1
1,921,494	-				-0.3
1,921,494	-				-0.6
1,921,494	-				-1.8
1,921,494	-				-0.8
1,921,494	-				-0.1
1,921,494	-				-1.9
1,921,494	-				-1.0
1,921,494	-				-2.0
1,921,494	-				-0.0
1,921,494	-				-1.5
1,921,551	+		LRK53_RS08555	0.11	-1.7
1,921,551	+		LRK53_RS08555	0.11	-1.3
1,921,551	+		LRK53_RS08555	0.11	-2.1
1,921,551	+		LRK53_RS08555	0.11	-1.0
1,921,551	+		LRK53_RS08555	0.11	-0.7
1,921,551	+		LRK53_RS08555	0.11	-0.4
1,921,551	+		LRK53_RS08555	0.11	-1.2
1,921,551	+		LRK53_RS08555	0.11	-2.1
1,921,551	+		LRK53_RS08555	0.11	-0.5
1,921,552	-		LRK53_RS08555	0.11	-1.5
1,921,552	-		LRK53_RS08555	0.11	-0.1
1,921,552	-		LRK53_RS08555	0.11	-0.1
1,921,552	-		LRK53_RS08555	0.11	+0.6
1,921,552	-		LRK53_RS08555	0.11	-0.7
1,921,552	-		LRK53_RS08555	0.11	+0.4
1,921,552	-		LRK53_RS08555	0.11	-0.7
1,921,552	-		LRK53_RS08555	0.11	-0.5
1,921,552	-		LRK53_RS08555	0.11	-0.5
1,921,552	-		LRK53_RS08555	0.11	-3.5
1,921,552	-		LRK53_RS08555	0.11	-2.4
1,921,552	-		LRK53_RS08555	0.11	+1.6
1,921,560	+		LRK53_RS08555	0.12	-1.7
1,921,560	+		LRK53_RS08555	0.12	-0.3
1,921,560	+		LRK53_RS08555	0.12	-0.8
1,921,560	+		LRK53_RS08555	0.12	-2.8
1,921,560	+		LRK53_RS08555	0.12	-1.1
1,921,560	+		LRK53_RS08555	0.12	-1.3
1,921,561	-		LRK53_RS08555	0.13	+0.7
1,921,561	-		LRK53_RS08555	0.13	-1.0
1,921,561	-		LRK53_RS08555	0.13	-1.2
1,921,561	-		LRK53_RS08555	0.13	-0.5
1,921,561	-		LRK53_RS08555	0.13	+0.5
1,921,561	-		LRK53_RS08555	0.13	-2.2
1,921,578	+		LRK53_RS08555	0.15	-2.3
1,921,578	+		LRK53_RS08555	0.15	-1.3
1,921,578	+		LRK53_RS08555	0.15	+0.5
1,921,578	+		LRK53_RS08555	0.15	-3.4
1,921,578	+		LRK53_RS08555	0.15	-0.3
1,921,578	+		LRK53_RS08555	0.15	+0.6
1,921,578	+		LRK53_RS08555	0.15	-0.1
1,921,578	+		LRK53_RS08555	0.15	-1.4
1,921,578	+		LRK53_RS08555	0.15	-2.5
1,921,578	+		LRK53_RS08555	0.15	+0.9
1,921,578	+		LRK53_RS08555	0.15	+1.9
1,921,579	-		LRK53_RS08555	0.15	-0.4
1,921,579	-		LRK53_RS08555	0.15	-1.0
1,921,579	-		LRK53_RS08555	0.15	-0.7
1,921,579	-		LRK53_RS08555	0.15	-0.8
1,921,579	-		LRK53_RS08555	0.15	-3.0
1,921,579	-		LRK53_RS08555	0.15	+0.2
1,921,579	-		LRK53_RS08555	0.15	+0.1
1,921,579	-		LRK53_RS08555	0.15	+0.3
1,921,590	+		LRK53_RS08555	0.17	-0.8
1,921,590	+		LRK53_RS08555	0.17	-0.7
1,921,591	-		LRK53_RS08555	0.17	-2.8
1,921,591	-		LRK53_RS08555	0.17	-2.8
1,921,605	+		LRK53_RS08555	0.19	-1.0
1,921,625	+		LRK53_RS08555	0.22	+1.1
1,921,626	-		LRK53_RS08555	0.22	+0.5
1,921,626	-		LRK53_RS08555	0.22	-2.8
1,921,626	-		LRK53_RS08555	0.22	-1.2
1,921,679	-		LRK53_RS08555	0.30	+0.5
1,921,679	-		LRK53_RS08555	0.30	-2.0
1,921,680	+		LRK53_RS08555	0.30	-0.6
1,921,681	-		LRK53_RS08555	0.30	-2.8
1,921,681	-		LRK53_RS08555	0.30	-1.7
1,921,681	-		LRK53_RS08555	0.30	-0.6
1,921,681	-		LRK53_RS08555	0.30	-2.6
1,921,716	+		LRK53_RS08555	0.35	-0.5
1,921,716	+		LRK53_RS08555	0.35	-1.1
1,921,716	+		LRK53_RS08555	0.35	+0.2
1,921,717	-		LRK53_RS08555	0.36	-0.5
1,921,717	-		LRK53_RS08555	0.36	-0.5
1,921,734	+		LRK53_RS08555	0.38	-0.4
1,921,818	+		LRK53_RS08555	0.50	+1.1
1,921,818	+		LRK53_RS08555	0.50	+0.4
1,921,819	-		LRK53_RS08555	0.51	+0.9
1,921,893	+		LRK53_RS08555	0.61	+0.1
1,921,894	-		LRK53_RS08555	0.62	-0.3
1,922,191	+				-0.5
1,922,191	+				-1.1
1,922,191	+				-1.1
1,922,223	+				+0.9
1,922,250	-				-0.2