Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS00575

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
127,400	+		LRK53_RS00570	0.56	+0.2
127,401	-		LRK53_RS00570	0.56	-0.6
127,401	-		LRK53_RS00570	0.56	-1.0
127,673	+		LRK53_RS00570	0.76	+0.4
127,735	+		LRK53_RS00570	0.80	-1.8
127,735	+		LRK53_RS00570	0.80	-1.8
127,736	-		LRK53_RS00570	0.80	+1.0
127,960	+				-0.3
127,960	+				+0.0
127,960	+				-1.6
127,960	+				+1.4
127,960	+				-0.4
127,960	+				+0.1
127,960	+				+1.4
127,961	-				-1.1
127,961	-				+0.8
128,183	+				-0.8
128,183	+				-1.2
128,183	+				+0.4
128,183	+				-0.5
128,183	+				-1.6
128,184	-				+0.4
128,256	+				-0.5
128,391	+				-1.1
128,415	+				-0.4
128,416	-				-1.6
128,416	-				-1.8
128,416	-				-1.4
128,416	-				+0.9
128,416	-				-0.8
128,416	-				-0.5
128,416	-				+1.2
128,457	+				-1.1
128,478	+				-0.5
128,478	+				-1.0
128,478	+				-0.0
128,478	+				-2.5
128,478	+				-0.3
128,478	+				-1.8
128,478	+				-0.3
128,479	-				-0.6
128,479	-				+0.3
128,479	-				-0.5
128,479	-				-1.3
128,494	-				-1.7
128,619	+		LRK53_RS00575	0.13	-0.8
128,619	+		LRK53_RS00575	0.13	-0.5
128,619	+		LRK53_RS00575	0.13	+0.7
128,620	-		LRK53_RS00575	0.13	-0.3
128,620	-		LRK53_RS00575	0.13	-0.5
128,620	-		LRK53_RS00575	0.13	-0.3
128,662	+		LRK53_RS00575	0.14	-0.9
128,662	+		LRK53_RS00575	0.14	-1.0
128,662	+		LRK53_RS00575	0.14	+1.7
128,662	+		LRK53_RS00575	0.14	-0.6
128,662	+		LRK53_RS00575	0.14	-2.5
128,662	+		LRK53_RS00575	0.14	+0.8
128,662	+		LRK53_RS00575	0.14	-0.6
128,662	+		LRK53_RS00575	0.14	-1.3
128,662	+		LRK53_RS00575	0.14	-3.6
128,662	+		LRK53_RS00575	0.14	-1.2
128,663	-		LRK53_RS00575	0.14	-0.0
128,663	-		LRK53_RS00575	0.14	-1.6
128,663	-		LRK53_RS00575	0.14	-0.5
128,664	+		LRK53_RS00575	0.14	-0.6
128,664	+		LRK53_RS00575	0.14	-2.2
128,664	+		LRK53_RS00575	0.14	-1.8
128,664	+		LRK53_RS00575	0.14	-0.0
128,665	-		LRK53_RS00575	0.14	+1.1
128,874	+		LRK53_RS00575	0.20	-2.1
129,162	+		LRK53_RS00575	0.27	-1.2
129,162	+		LRK53_RS00575	0.27	-1.3
129,163	-		LRK53_RS00575	0.27	+1.5
129,163	-		LRK53_RS00575	0.27	+0.9
129,291	+		LRK53_RS00575	0.30	-1.5
129,291	+		LRK53_RS00575	0.30	-1.2
129,292	-		LRK53_RS00575	0.31	-2.9
129,292	-		LRK53_RS00575	0.31	-1.4
129,292	-		LRK53_RS00575	0.31	+1.3
129,292	-		LRK53_RS00575	0.31	+0.8
129,292	-		LRK53_RS00575	0.31	-2.4
129,292	-		LRK53_RS00575	0.31	-2.3
129,292	-		LRK53_RS00575	0.31	-0.8
129,292	-		LRK53_RS00575	0.31	-0.5
129,292	-		LRK53_RS00575	0.31	-0.4
129,306	+		LRK53_RS00575	0.31	-2.1
129,306	+		LRK53_RS00575	0.31	-0.3
129,306	+		LRK53_RS00575	0.31	-0.4
129,306	+		LRK53_RS00575	0.31	-0.7
129,306	+		LRK53_RS00575	0.31	-0.8
129,306	+		LRK53_RS00575	0.31	-0.9
129,307	-		LRK53_RS00575	0.31	-0.9
129,307	-		LRK53_RS00575	0.31	+0.6
129,307	-		LRK53_RS00575	0.31	-1.4
129,307	-		LRK53_RS00575	0.31	+1.4
129,307	-		LRK53_RS00575	0.31	-0.2
129,510	+		LRK53_RS00575	0.36	-1.2
129,510	+		LRK53_RS00575	0.36	+1.4
129,510	+		LRK53_RS00575	0.36	-0.6
129,511	-		LRK53_RS00575	0.36	+1.2
129,511	-		LRK53_RS00575	0.36	-1.7
129,511	-		LRK53_RS00575	0.36	-0.6
129,511	-		LRK53_RS00575	0.36	-2.3
129,511	-		LRK53_RS00575	0.36	+0.5
129,513	+		LRK53_RS00575	0.36	-1.0
129,513	+		LRK53_RS00575	0.36	-1.6
129,678	+		LRK53_RS00575	0.40	-1.8
129,679	-		LRK53_RS00575	0.41	-0.5
129,679	-		LRK53_RS00575	0.41	-0.5
130,060	-		LRK53_RS00575	0.50	+0.3
130,221	+		LRK53_RS00575	0.55	-0.5
130,222	-		LRK53_RS00575	0.55	-0.8
130,293	+		LRK53_RS00575	0.56	-1.0
130,293	+		LRK53_RS00575	0.56	-1.3
130,293	+		LRK53_RS00575	0.56	-1.0
130,293	+		LRK53_RS00575	0.56	-1.0
130,294	-		LRK53_RS00575	0.56	+0.3
130,480	-		LRK53_RS00575	0.61	-1.0
130,857	+		LRK53_RS00575	0.71	-2.6
130,857	+		LRK53_RS00575	0.71	-2.2
130,857	+		LRK53_RS00575	0.71	-0.3
130,857	+		LRK53_RS00575	0.71	-0.7
130,858	-		LRK53_RS00575	0.71	-0.5
130,858	-		LRK53_RS00575	0.71	-0.3
130,858	-		LRK53_RS00575	0.71	-1.0
130,858	-		LRK53_RS00575	0.71	+1.1
131,025	+		LRK53_RS00575	0.75	+2.0
131,025	+		LRK53_RS00575	0.75	-1.6
131,026	-		LRK53_RS00575	0.75	-0.6
131,026	-		LRK53_RS00575	0.75	-0.7
131,264	+		LRK53_RS00575	0.81	-0.5
131,575	-		LRK53_RS00575	0.90	+0.1
131,677	+				-0.0
131,677	+				+1.6
131,677	+				-0.3
131,677	+				-1.7
131,677	+				-3.0
131,677	+				-1.4
131,677	+				-0.1
131,677	+				-2.0
131,678	-				-0.2
131,678	-				+0.5
131,678	-				-0.1
131,678	-				-0.1
131,678	-				-0.3
131,681	+				-0.3
131,681	+				+0.3
131,681	+				-1.4
131,681	+				-0.1
131,681	+				-1.2
131,681	+				-3.0
131,681	+				+0.6
131,681	+				+0.1
131,681	+				-0.0
131,682	-				-0.8
131,682	-				-0.3
131,682	-				+0.8
131,682	-				+0.9
131,682	-				-1.4
131,682	-				-0.6
131,682	-				-2.6
131,682	-				-2.6
131,682	-				-0.2
131,682	-				-2.5
131,682	-				-1.1
131,682	-				-1.2
131,682	-				+1.6
131,682	-				-1.0
131,682	-				+0.2
131,682	-				+2.0
131,757	+				-0.4
131,758	-				-1.1
131,814	+				-1.2
131,814	+				-0.5
131,814	+				-0.6
131,814	+				-0.1
131,814	+				-1.3
131,814	+				-1.6
131,814	+				-0.8
131,815	-				-0.8
131,815	-				+1.8
131,815	-				-1.6
131,815	-				-1.2
131,815	-				-1.3
131,815	-				-1.2
131,815	-				+2.6
131,815	-				+0.4
131,916	+				-0.9
132,031	+				-0.6
132,031	+				-1.6
132,031	+				+0.2
132,032	-				-0.4
132,032	-				-0.3
132,068	+				-1.4
132,068	+				-0.4
132,068	+				-0.3
132,068	+				-1.3
132,068	+				-0.6
132,069	-				-0.7
132,243	+				-2.2
132,243	+				+0.2
132,244	-				+0.7
132,252	+				+0.9
132,253	-				+0.7
132,474	+		LRK53_RS00580	0.23	+0.1
132,474	+		LRK53_RS00580	0.23	+0.9
132,474	+		LRK53_RS00580	0.23	+0.4
132,474	+		LRK53_RS00580	0.23	-0.9
132,474	+		LRK53_RS00580	0.23	-1.4
132,474	+		LRK53_RS00580	0.23	-1.3
132,474	+		LRK53_RS00580	0.23	+0.9
132,474	+		LRK53_RS00580	0.23	-1.5
132,474	+		LRK53_RS00580	0.23	+0.7
132,474	+		LRK53_RS00580	0.23	-3.0
132,475	-		LRK53_RS00580	0.23	-0.2
132,475	-		LRK53_RS00580	0.23	+0.5
132,475	-		LRK53_RS00580	0.23	+0.7
132,475	-		LRK53_RS00580	0.23	-0.9
132,477	+		LRK53_RS00580	0.23	-0.8
132,477	+		LRK53_RS00580	0.23	-1.1
132,477	+		LRK53_RS00580	0.23	-1.1
132,477	+		LRK53_RS00580	0.23	-1.8
132,477	+		LRK53_RS00580	0.23	+0.3
132,478	-		LRK53_RS00580	0.23	+0.4
132,478	-		LRK53_RS00580	0.23	+0.3
132,579	+		LRK53_RS00580	0.31	-2.3
132,579	+		LRK53_RS00580	0.31	-1.0
132,580	-		LRK53_RS00580	0.31	+0.1
132,580	-		LRK53_RS00580	0.31	-1.0
132,580	-		LRK53_RS00580	0.31	-1.5
132,636	+		LRK53_RS00580	0.35	+0.6
132,637	-		LRK53_RS00580	0.35	-1.1
132,637	-		LRK53_RS00580	0.35	-2.3
132,637	-		LRK53_RS00580	0.35	-1.1
132,756	+		LRK53_RS00580	0.44	+1.1
132,756	+		LRK53_RS00580	0.44	-1.5
132,756	+		LRK53_RS00580	0.44	+0.8
132,756	+		LRK53_RS00580	0.44	+1.0
132,757	-		LRK53_RS00580	0.44	-0.8
132,757	-		LRK53_RS00580	0.44	-0.6
132,757	-		LRK53_RS00580	0.44	-1.1
132,757	-		LRK53_RS00580	0.44	-0.1
132,757	-		LRK53_RS00580	0.44	-1.6
132,804	+		LRK53_RS00580	0.48	+0.2
132,804	+		LRK53_RS00580	0.48	-1.7
132,805	-		LRK53_RS00580	0.48	-1.1
132,805	-		LRK53_RS00580	0.48	-0.9
132,825	+		LRK53_RS00580	0.49	-1.0
132,825	+		LRK53_RS00580	0.49	-3.8
132,825	+		LRK53_RS00580	0.49	-0.1
132,826	-		LRK53_RS00580	0.49	-2.8
132,826	-		LRK53_RS00580	0.49	+0.4
132,843	+		LRK53_RS00580	0.51	-2.1
132,843	+		LRK53_RS00580	0.51	+0.8
132,843	+		LRK53_RS00580	0.51	-2.2
132,843	+		LRK53_RS00580	0.51	+0.9
132,844	-		LRK53_RS00580	0.51	-0.1
132,855	+		LRK53_RS00580	0.51	+2.4
132,855	+		LRK53_RS00580	0.51	-1.0
132,855	+		LRK53_RS00580	0.51	-1.2
132,855	+		LRK53_RS00580	0.51	+0.6
132,855	+		LRK53_RS00580	0.51	-1.6
132,855	+		LRK53_RS00580	0.51	-0.9
132,855	+		LRK53_RS00580	0.51	-2.3
132,855	+		LRK53_RS00580	0.51	-0.8
132,855	+		LRK53_RS00580	0.51	-2.1
132,856	-		LRK53_RS00580	0.52	-0.3
132,856	-		LRK53_RS00580	0.52	+2.0
132,861	+		LRK53_RS00580	0.52	-1.9
132,861	+		LRK53_RS00580	0.52	-2.1
132,861	+		LRK53_RS00580	0.52	+1.4
132,861	+		LRK53_RS00580	0.52	-0.5
132,861	+		LRK53_RS00580	0.52	+0.7
132,862	-		LRK53_RS00580	0.52	-1.2
132,862	-		LRK53_RS00580	0.52	-0.3
132,862	-		LRK53_RS00580	0.52	+0.1
132,954	+		LRK53_RS00580	0.59	+0.1
132,954	+		LRK53_RS00580	0.59	-1.6
132,954	+		LRK53_RS00580	0.59	+0.2
132,954	+		LRK53_RS00580	0.59	-1.1
132,955	-		LRK53_RS00580	0.59	-2.6
132,955	-		LRK53_RS00580	0.59	-2.4