Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS00525

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
114,163	+		LRK53_RS00520	0.24	-1.8
114,163	+		LRK53_RS00520	0.24	-0.9
114,163	+		LRK53_RS00520	0.24	-1.0
114,163	+		LRK53_RS00520	0.24	-0.2
114,163	+		LRK53_RS00520	0.24	+1.5
114,163	+		LRK53_RS00520	0.24	+0.5
114,164	-		LRK53_RS00520	0.25	-2.0
114,164	-		LRK53_RS00520	0.25	-2.8
114,164	-		LRK53_RS00520	0.25	+0.4
114,164	-		LRK53_RS00520	0.25	-1.3
114,164	-		LRK53_RS00520	0.25	+1.3
114,164	-		LRK53_RS00520	0.25	+1.0
114,164	-		LRK53_RS00520	0.25	+1.1
114,282	+		LRK53_RS00520	0.35	+0.7
114,966	+				-1.5
114,967	-				+0.4
114,967	-				-1.0
115,377	-		LRK53_RS00525	0.34	-0.9
115,872	+		LRK53_RS00525	0.78	-1.8
115,872	+		LRK53_RS00525	0.78	-1.2
116,081	+				-1.0
116,081	+				-1.0
116,081	+				-0.4
116,081	+				-0.9
116,081	+				-0.5
116,081	+				+0.5
116,081	+				-0.3
116,081	+				-1.5
116,081	+				+0.7
116,081	+				-2.0
116,082	-				+0.3
116,082	-				-1.1
116,082	-				-0.5
116,082	-				+0.1
116,082	-				-0.2
116,082	-				-1.3
116,082	-				-1.6
116,082	-				-0.6
116,082	-				-1.6
116,082	-				+1.4
116,082	-				+1.0
116,082	-				-0.9
116,082	-				+0.3
116,082	-				-0.1
116,082	-				-1.3
116,082	-				-0.8
116,115	+				-1.3
116,115	+				-1.4
116,115	+				-2.2
116,115	+				-2.1
116,115	+				-1.2
116,116	-				-0.4
116,116	-				-0.5
116,116	-				-2.1
116,116	-				-0.8
116,116	-				-1.4
116,126	+				+0.3
116,126	+				-3.1
116,126	+				-0.8
116,126	+				+0.4
116,126	+				-2.4
116,126	+				-1.5
116,127	-				-1.1
116,127	-				+0.2
116,127	-				-0.6
116,127	-				+0.0
116,127	-				-2.5
116,127	-				-1.1
116,158	-				-1.5
116,235	+				-0.3
116,236	-				-0.3
116,241	+				-0.8
116,247	+				-0.6
116,247	+				-0.2
116,247	+				-0.8
116,247	+				-1.4
116,247	+				-0.6
116,248	-				-0.5
116,248	-				-0.5
116,248	-				-0.8
116,248	-				+1.4
116,248	-				-1.3
116,248	-				+1.5
116,248	-				-1.5
116,248	-				-0.3
116,248	-				-0.1
116,248	-				-0.8
116,261	+				+1.4
116,262	-				-2.9
116,292	+				-0.5
116,292	+				-1.6
116,292	+				-0.5
116,292	+				-1.0
116,292	+				-2.6
116,292	+				-1.5
116,292	+				-1.2
116,292	+				-1.0
116,292	+				+0.5
116,292	+				-0.1
116,292	+				+0.8
116,293	-				-0.6
116,293	-				-0.8
116,293	-				-0.2
116,293	-				+0.0
116,293	-				+3.3
116,293	-				-0.8
116,293	-				+1.3
116,293	-				-0.4
116,293	-				-0.3
116,293	-				+1.6
116,293	-				-0.8
116,293	-				-2.5
116,293	-				+0.1
116,293	-				-0.6
116,293	-				+0.5
116,317	+				-1.1
116,318	-				-1.3
116,318	-				+0.1
116,523	+		LRK53_RS00530	0.21	-1.6
116,523	+		LRK53_RS00530	0.21	-0.5
116,523	+		LRK53_RS00530	0.21	+2.2
116,523	+		LRK53_RS00530	0.21	-0.2
116,524	-		LRK53_RS00530	0.21	+1.0
116,524	-		LRK53_RS00530	0.21	-1.6
116,754	+		LRK53_RS00530	0.45	+0.7
116,754	+		LRK53_RS00530	0.45	-0.3
116,755	-		LRK53_RS00530	0.45	+0.6
116,829	+		LRK53_RS00530	0.53	-1.6
116,830	-		LRK53_RS00530	0.53	-2.7
116,830	-		LRK53_RS00530	0.53	-1.4
116,830	-		LRK53_RS00530	0.53	-0.3
116,841	+		LRK53_RS00530	0.55	+0.2
116,841	+		LRK53_RS00530	0.55	-2.2
116,841	+		LRK53_RS00530	0.55	-0.1
116,842	-		LRK53_RS00530	0.55	-1.0
116,847	+		LRK53_RS00530	0.55	-0.9
116,847	+		LRK53_RS00530	0.55	+0.6
116,847	+		LRK53_RS00530	0.55	-5.0
116,848	-		LRK53_RS00530	0.55	-1.0
116,848	-		LRK53_RS00530	0.55	-0.5
116,848	-		LRK53_RS00530	0.55	-0.6
116,848	-		LRK53_RS00530	0.55	-0.4
116,848	-		LRK53_RS00530	0.55	-1.0
117,084	+		LRK53_RS00530	0.80	+0.7
117,084	+		LRK53_RS00530	0.80	-2.1
117,102	+		LRK53_RS00530	0.82	+0.9
117,102	+		LRK53_RS00530	0.82	-1.8
117,102	+		LRK53_RS00530	0.82	+0.4
117,103	-		LRK53_RS00530	0.82	+1.5
117,103	-		LRK53_RS00530	0.82	+1.4