Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03191 and MPMX19_03192 are separated by 186 nucleotides MPMX19_03192 and MPMX19_03193 are separated by 87 nucleotides MPMX19_03193 and MPMX19_03194 are separated by 49 nucleotides MPMX19_03194 and MPMX19_03195 are separated by 278 nucleotides MPMX19_03195 and MPMX19_03196 are separated by 68 nucleotides
MPMX19_03191: MPMX19_03191 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 487,250 to 490,405
_03191
MPMX19_03192: MPMX19_03192 - hypothetical protein, at 490,592 to 490,789
_03192
MPMX19_03193: MPMX19_03193 - hypothetical protein, at 490,877 to 491,161
_03193
MPMX19_03194: MPMX19_03194 - hypothetical protein, at 491,211 to 491,366
_03194
MPMX19_03195: MPMX19_03195 - hypothetical protein, at 491,645 to 491,947
_03195
MPMX19_03196: MPMX19_03196 - hypothetical protein, at 492,016 to 492,756
_03196
Position (kb) 491
492 Strain fitness (log2 ratio) -2
-1
0
1 at 490.494 kb on + strand at 490.495 kb on - strand at 490.495 kb on - strand at 490.601 kb on - strand at 490.601 kb on - strand at 490.601 kb on - strand at 490.601 kb on - strand at 490.601 kb on - strand at 490.636 kb on - strand, within MPMX19_03192 at 490.778 kb on + strand at 490.778 kb on + strand at 490.778 kb on + strand at 490.779 kb on - strand at 490.810 kb on - strand at 491.014 kb on - strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.064 kb on + strand, within MPMX19_03193 at 491.065 kb on - strand, within MPMX19_03193 at 491.065 kb on - strand, within MPMX19_03193 at 491.065 kb on - strand, within MPMX19_03193 at 491.065 kb on - strand, within MPMX19_03193 at 491.065 kb on - strand, within MPMX19_03193 at 491.065 kb on - strand, within MPMX19_03193 at 491.065 kb on - strand, within MPMX19_03193 at 491.065 kb on - strand, within MPMX19_03193 at 491.123 kb on + strand, within MPMX19_03193 at 491.123 kb on + strand, within MPMX19_03193 at 491.212 kb on + strand at 491.213 kb on - strand at 491.275 kb on + strand, within MPMX19_03194 at 491.275 kb on + strand, within MPMX19_03194 at 491.275 kb on + strand, within MPMX19_03194 at 491.399 kb on - strand at 491.455 kb on - strand at 491.498 kb on + strand at 491.498 kb on + strand at 491.498 kb on + strand at 491.499 kb on - strand at 491.524 kb on + strand at 491.598 kb on + strand at 491.599 kb on - strand at 491.681 kb on + strand, within MPMX19_03195 at 491.681 kb on + strand, within MPMX19_03195 at 491.682 kb on - strand, within MPMX19_03195 at 491.682 kb on - strand, within MPMX19_03195 at 491.961 kb on - strand at 491.972 kb on + strand at 491.972 kb on + strand at 491.972 kb on + strand at 491.982 kb on - strand at 491.982 kb on - strand at 492.040 kb on + strand at 492.040 kb on + strand at 492.040 kb on + strand at 492.041 kb on - strand at 492.041 kb on - strand at 492.041 kb on - strand at 492.196 kb on + strand, within MPMX19_03196 at 492.196 kb on + strand, within MPMX19_03196 at 492.196 kb on + strand, within MPMX19_03196 at 492.196 kb on + strand, within MPMX19_03196 at 492.197 kb on - strand, within MPMX19_03196 at 492.197 kb on - strand, within MPMX19_03196
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 490,494 + -1.4 490,495 - -1.3 490,495 - -0.8 490,601 - +0.9 490,601 - -1.1 490,601 - -1.0 490,601 - -0.3 490,601 - -2.0 490,636 - MPMX19_03192 0.22 -0.2 490,778 + -0.4 490,778 + -0.0 490,778 + -2.1 490,779 - -1.6 490,810 - +1.3 491,014 - MPMX19_03193 0.48 -1.2 491,064 + MPMX19_03193 0.66 +0.8 491,064 + MPMX19_03193 0.66 +0.4 491,064 + MPMX19_03193 0.66 +0.1 491,064 + MPMX19_03193 0.66 +1.1 491,064 + MPMX19_03193 0.66 +0.8 491,064 + MPMX19_03193 0.66 -0.7 491,064 + MPMX19_03193 0.66 +0.3 491,064 + MPMX19_03193 0.66 -2.4 491,064 + MPMX19_03193 0.66 -2.0 491,064 + MPMX19_03193 0.66 -1.0 491,065 - MPMX19_03193 0.66 -1.2 491,065 - MPMX19_03193 0.66 -0.6 491,065 - MPMX19_03193 0.66 -1.2 491,065 - MPMX19_03193 0.66 -1.4 491,065 - MPMX19_03193 0.66 -0.5 491,065 - MPMX19_03193 0.66 +0.1 491,065 - MPMX19_03193 0.66 -1.5 491,065 - MPMX19_03193 0.66 +0.1 491,123 + MPMX19_03193 0.86 -1.0 491,123 + MPMX19_03193 0.86 -1.0 491,212 + +0.7 491,213 - -2.0 491,275 + MPMX19_03194 0.41 -1.3 491,275 + MPMX19_03194 0.41 -0.6 491,275 + MPMX19_03194 0.41 -0.5 491,399 - -0.4 491,455 - -2.2 491,498 + -0.1 491,498 + -0.5 491,498 + +0.9 491,499 - -0.5 491,524 + -2.5 491,598 + +0.4 491,599 - -1.0 491,681 + MPMX19_03195 0.12 +1.3 491,681 + MPMX19_03195 0.12 -0.3 491,682 - MPMX19_03195 0.12 +0.2 491,682 - MPMX19_03195 0.12 -1.5 491,961 - +1.0 491,972 + -1.4 491,972 + -1.7 491,972 + -1.0 491,982 - -1.4 491,982 - -0.5 492,040 + -1.0 492,040 + +0.6 492,040 + -0.5 492,041 - -1.2 492,041 - -0.1 492,041 - +0.6 492,196 + MPMX19_03196 0.24 -1.4 492,196 + MPMX19_03196 0.24 -0.8 492,196 + MPMX19_03196 0.24 +1.3 492,196 + MPMX19_03196 0.24 -2.0 492,197 - MPMX19_03196 0.24 +0.3 492,197 - MPMX19_03196 0.24 -0.8
Or see this region's nucleotide sequence