Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00828 and MPMX19_00829 are separated by 448 nucleotides MPMX19_00829 and MPMX19_00830 overlap by 1 nucleotides MPMX19_00830 and MPMX19_00831 are separated by 65 nucleotides
MPMX19_00828: MPMX19_00828 - hypothetical protein, at 859,775 to 860,896
_00828
MPMX19_00829: MPMX19_00829 - hypothetical protein, at 861,345 to 861,641
_00829
MPMX19_00830: MPMX19_00830 - Toxin FitB, at 861,641 to 862,072
_00830
MPMX19_00831: MPMX19_00831 - GMP synthase [glutamine-hydrolyzing], at 862,138 to 863,706
_00831
Position (kb) 861
862
863 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 860.903 kb on - strand at 860.979 kb on - strand at 860.979 kb on - strand at 861.019 kb on + strand at 861.019 kb on + strand at 861.019 kb on + strand at 861.019 kb on + strand at 861.019 kb on + strand at 861.020 kb on - strand at 861.020 kb on - strand at 861.020 kb on - strand at 861.042 kb on + strand at 861.043 kb on - strand at 861.082 kb on + strand at 861.082 kb on + strand at 861.083 kb on - strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.133 kb on + strand at 861.134 kb on - strand at 861.134 kb on - strand at 861.134 kb on - strand at 861.134 kb on - strand at 861.134 kb on - strand at 861.134 kb on - strand at 861.134 kb on - strand at 861.134 kb on - strand at 861.134 kb on - strand at 861.134 kb on - strand at 861.318 kb on + strand at 861.318 kb on + strand at 861.319 kb on - strand at 861.319 kb on - strand at 861.319 kb on - strand at 861.365 kb on + strand at 861.365 kb on + strand at 861.365 kb on + strand at 861.365 kb on + strand at 861.365 kb on + strand at 861.365 kb on + strand at 861.365 kb on + strand at 861.366 kb on - strand at 861.366 kb on - strand at 861.366 kb on - strand at 861.366 kb on - strand at 861.366 kb on - strand at 861.366 kb on - strand at 861.366 kb on - strand at 861.452 kb on + strand, within MPMX19_00829 at 861.666 kb on + strand at 861.666 kb on + strand at 861.666 kb on + strand at 861.666 kb on + strand at 861.667 kb on - strand at 861.667 kb on - strand at 861.667 kb on - strand at 861.676 kb on + strand at 861.743 kb on + strand, within MPMX19_00830 at 861.743 kb on + strand, within MPMX19_00830 at 861.743 kb on + strand, within MPMX19_00830 at 861.743 kb on + strand, within MPMX19_00830 at 861.744 kb on - strand, within MPMX19_00830 at 861.744 kb on - strand, within MPMX19_00830 at 861.744 kb on - strand, within MPMX19_00830 at 861.744 kb on - strand, within MPMX19_00830 at 861.744 kb on - strand, within MPMX19_00830 at 861.782 kb on - strand, within MPMX19_00830 at 861.783 kb on + strand, within MPMX19_00830 at 861.783 kb on + strand, within MPMX19_00830 at 861.783 kb on + strand, within MPMX19_00830 at 861.783 kb on + strand, within MPMX19_00830 at 861.783 kb on + strand, within MPMX19_00830 at 861.783 kb on + strand, within MPMX19_00830 at 861.783 kb on + strand, within MPMX19_00830 at 861.783 kb on + strand, within MPMX19_00830 at 861.784 kb on - strand, within MPMX19_00830 at 861.784 kb on - strand, within MPMX19_00830 at 861.784 kb on - strand, within MPMX19_00830 at 861.784 kb on - strand, within MPMX19_00830 at 861.784 kb on - strand, within MPMX19_00830 at 861.784 kb on - strand, within MPMX19_00830 at 861.903 kb on + strand, within MPMX19_00830 at 861.999 kb on + strand, within MPMX19_00830 at 862.000 kb on - strand, within MPMX19_00830 at 862.127 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 860,903 - +0.2 860,979 - -0.5 860,979 - -1.3 861,019 + -0.9 861,019 + -0.2 861,019 + -0.6 861,019 + -0.3 861,019 + -1.4 861,020 - -1.1 861,020 - -0.1 861,020 - -0.6 861,042 + +0.3 861,043 - +0.4 861,082 + +0.7 861,082 + -0.1 861,083 - +0.6 861,133 + +0.9 861,133 + -0.3 861,133 + -0.1 861,133 + +0.7 861,133 + +0.5 861,133 + -0.5 861,133 + +0.1 861,133 + -1.1 861,133 + +0.6 861,133 + -1.0 861,133 + -3.0 861,133 + -0.5 861,134 - +0.8 861,134 - +0.2 861,134 - -0.9 861,134 - -0.9 861,134 - -1.9 861,134 - +0.2 861,134 - +0.2 861,134 - -0.5 861,134 - -0.4 861,134 - -0.9 861,318 + +0.8 861,318 + +1.4 861,319 - +0.1 861,319 - +0.2 861,319 - -0.3 861,365 + -0.4 861,365 + +0.6 861,365 + -0.4 861,365 + +0.2 861,365 + +0.2 861,365 + +0.2 861,365 + +0.2 861,366 - -1.2 861,366 - -0.7 861,366 - +0.6 861,366 - +0.6 861,366 - -1.0 861,366 - -2.9 861,366 - -1.6 861,452 + MPMX19_00829 0.36 -1.6 861,666 + -1.3 861,666 + -1.4 861,666 + +0.0 861,666 + +0.8 861,667 - +0.4 861,667 - -2.1 861,667 - +0.1 861,676 + -3.2 861,743 + MPMX19_00830 0.24 -0.8 861,743 + MPMX19_00830 0.24 -0.8 861,743 + MPMX19_00830 0.24 -2.4 861,743 + MPMX19_00830 0.24 -0.4 861,744 - MPMX19_00830 0.24 +1.2 861,744 - MPMX19_00830 0.24 -1.0 861,744 - MPMX19_00830 0.24 -0.4 861,744 - MPMX19_00830 0.24 -0.5 861,744 - MPMX19_00830 0.24 +0.6 861,782 - MPMX19_00830 0.33 -0.1 861,783 + MPMX19_00830 0.33 -0.8 861,783 + MPMX19_00830 0.33 -2.6 861,783 + MPMX19_00830 0.33 -1.4 861,783 + MPMX19_00830 0.33 -0.4 861,783 + MPMX19_00830 0.33 -1.3 861,783 + MPMX19_00830 0.33 -2.4 861,783 + MPMX19_00830 0.33 -1.2 861,783 + MPMX19_00830 0.33 -0.6 861,784 - MPMX19_00830 0.33 -0.7 861,784 - MPMX19_00830 0.33 -0.1 861,784 - MPMX19_00830 0.33 +0.2 861,784 - MPMX19_00830 0.33 -0.0 861,784 - MPMX19_00830 0.33 +1.2 861,784 - MPMX19_00830 0.33 -2.8 861,903 + MPMX19_00830 0.61 +0.1 861,999 + MPMX19_00830 0.83 -0.4 862,000 - MPMX19_00830 0.83 +0.3 862,127 - -0.4
Or see this region's nucleotide sequence