Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00730

Experiment: NL-CCM; spin-x control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00729 and MPMX19_00730 are separated by 244 nucleotidesMPMX19_00730 and MPMX19_00731 are separated by 91 nucleotides MPMX19_00729: MPMX19_00729 - K(+)-insensitive pyrophosphate-energized proton pump, at 750,386 to 752,488 _00729 MPMX19_00730: MPMX19_00730 - hypothetical protein, at 752,733 to 753,191 _00730 MPMX19_00731: MPMX19_00731 - Thiamine-monophosphate kinase, at 753,283 to 754,275 _00731 Position (kb) 752 753 754Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 751.776 kb on + strand, within MPMX19_00729at 751.776 kb on + strand, within MPMX19_00729at 751.776 kb on + strand, within MPMX19_00729at 751.777 kb on - strand, within MPMX19_00729at 751.777 kb on - strand, within MPMX19_00729at 751.777 kb on - strand, within MPMX19_00729at 751.777 kb on - strand, within MPMX19_00729at 752.037 kb on + strand, within MPMX19_00729at 752.037 kb on + strand, within MPMX19_00729at 752.037 kb on + strand, within MPMX19_00729at 752.037 kb on + strand, within MPMX19_00729at 752.037 kb on + strand, within MPMX19_00729at 752.037 kb on + strand, within MPMX19_00729at 752.037 kb on + strand, within MPMX19_00729at 752.038 kb on - strand, within MPMX19_00729at 752.038 kb on - strand, within MPMX19_00729at 752.038 kb on - strand, within MPMX19_00729at 752.038 kb on - strand, within MPMX19_00729at 752.061 kb on + strand, within MPMX19_00729at 752.061 kb on + strand, within MPMX19_00729at 752.061 kb on + strand, within MPMX19_00729at 752.061 kb on + strand, within MPMX19_00729at 752.062 kb on - strand, within MPMX19_00729at 752.062 kb on - strand, within MPMX19_00729at 752.062 kb on - strand, within MPMX19_00729at 752.211 kb on + strand, within MPMX19_00729at 752.211 kb on + strand, within MPMX19_00729at 752.211 kb on + strand, within MPMX19_00729at 752.211 kb on + strand, within MPMX19_00729at 752.211 kb on + strand, within MPMX19_00729at 752.211 kb on + strand, within MPMX19_00729at 752.211 kb on + strand, within MPMX19_00729at 752.212 kb on - strand, within MPMX19_00729at 752.212 kb on - strand, within MPMX19_00729at 752.212 kb on - strand, within MPMX19_00729at 752.212 kb on - strand, within MPMX19_00729at 752.212 kb on - strand, within MPMX19_00729at 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.325 kb on + strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.326 kb on - strandat 752.340 kb on + strandat 752.340 kb on + strandat 752.341 kb on - strandat 752.425 kb on + strandat 752.437 kb on - strandat 752.437 kb on - strandat 752.437 kb on - strandat 752.480 kb on + strandat 752.480 kb on + strandat 752.480 kb on + strandat 752.480 kb on + strandat 752.481 kb on - strandat 752.481 kb on - strandat 752.508 kb on + strandat 752.508 kb on + strandat 752.509 kb on - strandat 752.509 kb on - strandat 752.509 kb on - strandat 752.509 kb on - strandat 752.509 kb on - strandat 752.573 kb on + strandat 752.573 kb on + strandat 752.573 kb on + strandat 752.573 kb on + strandat 752.573 kb on + strandat 752.574 kb on - strandat 752.656 kb on + strandat 752.669 kb on + strandat 752.675 kb on + strandat 752.675 kb on + strandat 752.686 kb on + strandat 752.686 kb on + strandat 752.686 kb on + strandat 752.773 kb on + strandat 752.773 kb on + strandat 752.773 kb on + strandat 752.774 kb on - strandat 752.774 kb on - strandat 752.774 kb on - strandat 752.774 kb on - strandat 752.774 kb on - strandat 752.774 kb on - strandat 752.837 kb on + strand, within MPMX19_00730at 752.838 kb on - strand, within MPMX19_00730at 752.838 kb on - strand, within MPMX19_00730at 752.838 kb on - strand, within MPMX19_00730at 752.838 kb on - strand, within MPMX19_00730at 752.838 kb on - strand, within MPMX19_00730at 752.838 kb on - strand, within MPMX19_00730at 752.838 kb on - strand, within MPMX19_00730at 752.885 kb on - strand, within MPMX19_00730at 752.885 kb on - strand, within MPMX19_00730at 752.885 kb on - strand, within MPMX19_00730at 753.106 kb on + strand, within MPMX19_00730at 753.106 kb on + strand, within MPMX19_00730at 753.106 kb on + strand, within MPMX19_00730at 753.106 kb on + strand, within MPMX19_00730at 753.106 kb on + strand, within MPMX19_00730at 753.106 kb on + strand, within MPMX19_00730at 753.107 kb on - strand, within MPMX19_00730at 753.107 kb on - strand, within MPMX19_00730at 753.107 kb on - strand, within MPMX19_00730at 753.107 kb on - strand, within MPMX19_00730at 753.107 kb on - strand, within MPMX19_00730at 753.107 kb on - strand, within MPMX19_00730at 753.115 kb on + strand, within MPMX19_00730at 753.115 kb on + strand, within MPMX19_00730at 753.116 kb on - strand, within MPMX19_00730at 753.116 kb on - strand, within MPMX19_00730at 753.116 kb on - strand, within MPMX19_00730at 753.204 kb on + strandat 753.204 kb on + strandat 753.204 kb on + strandat 753.204 kb on + strandat 753.204 kb on + strandat 753.204 kb on + strandat 753.205 kb on - strandat 753.205 kb on - strandat 753.256 kb on + strandat 753.256 kb on + strandat 753.257 kb on - strandat 753.257 kb on - strandat 753.257 kb on - strandat 753.257 kb on - strandat 753.257 kb on - strandat 753.257 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; spin-x control
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751,776 + MPMX19_00729 0.66 -0.2
751,776 + MPMX19_00729 0.66 +0.6
751,776 + MPMX19_00729 0.66 +0.3
751,777 - MPMX19_00729 0.66 -1.1
751,777 - MPMX19_00729 0.66 +0.2
751,777 - MPMX19_00729 0.66 -1.2
751,777 - MPMX19_00729 0.66 +1.3
752,037 + MPMX19_00729 0.79 -0.6
752,037 + MPMX19_00729 0.79 -1.6
752,037 + MPMX19_00729 0.79 -0.2
752,037 + MPMX19_00729 0.79 +0.2
752,037 + MPMX19_00729 0.79 -1.4
752,037 + MPMX19_00729 0.79 +0.2
752,037 + MPMX19_00729 0.79 +0.1
752,038 - MPMX19_00729 0.79 +1.2
752,038 - MPMX19_00729 0.79 -0.1
752,038 - MPMX19_00729 0.79 -0.2
752,038 - MPMX19_00729 0.79 -0.6
752,061 + MPMX19_00729 0.80 -0.8
752,061 + MPMX19_00729 0.80 -1.9
752,061 + MPMX19_00729 0.80 +0.3
752,061 + MPMX19_00729 0.80 +0.8
752,062 - MPMX19_00729 0.80 -0.8
752,062 - MPMX19_00729 0.80 +0.5
752,062 - MPMX19_00729 0.80 -0.0
752,211 + MPMX19_00729 0.87 -1.1
752,211 + MPMX19_00729 0.87 +0.4
752,211 + MPMX19_00729 0.87 -0.3
752,211 + MPMX19_00729 0.87 +2.2
752,211 + MPMX19_00729 0.87 +0.6
752,211 + MPMX19_00729 0.87 -0.2
752,211 + MPMX19_00729 0.87 -0.5
752,212 - MPMX19_00729 0.87 -1.4
752,212 - MPMX19_00729 0.87 -2.8
752,212 - MPMX19_00729 0.87 +0.1
752,212 - MPMX19_00729 0.87 -0.6
752,212 - MPMX19_00729 0.87 -0.4
752,325 + +1.6
752,325 + +0.5
752,325 + -0.5
752,325 + +1.2
752,325 + -0.4
752,325 + +0.8
752,325 + -0.6
752,325 + -1.4
752,325 + +0.6
752,325 + -1.1
752,325 + +0.6
752,325 + +0.2
752,325 + -0.5
752,325 + +0.1
752,325 + -0.3
752,325 + -1.1
752,325 + +0.4
752,325 + +0.1
752,325 + +1.4
752,325 + +0.6
752,325 + -0.7
752,326 - -0.4
752,326 - +1.2
752,326 - -0.4
752,326 - -0.7
752,326 - -0.4
752,326 - -0.2
752,326 - +1.2
752,326 - -1.4
752,326 - -0.8
752,326 - +0.2
752,326 - -0.4
752,326 - -1.2
752,326 - +0.4
752,326 - -0.2
752,326 - -0.6
752,340 + +0.8
752,340 + +1.1
752,341 - -0.6
752,425 + -0.9
752,437 - -0.8
752,437 - +0.0
752,437 - -0.4
752,480 + +1.2
752,480 + -0.4
752,480 + -0.4
752,480 + -0.6
752,481 - +0.9
752,481 - -0.0
752,508 + -1.4
752,508 + +0.0
752,509 - -1.9
752,509 - +0.5
752,509 - -2.4
752,509 - -0.4
752,509 - -1.1
752,573 + -1.4
752,573 + +0.9
752,573 + +0.7
752,573 + -0.7
752,573 + +1.8
752,574 - +0.6
752,656 + -0.7
752,669 + +0.6
752,675 + -0.4
752,675 + -1.0
752,686 + -2.4
752,686 + -0.4
752,686 + +0.0
752,773 + +0.5
752,773 + -0.4
752,773 + +0.5
752,774 - +0.4
752,774 - +1.0
752,774 - -0.9
752,774 - +0.9
752,774 - -1.9
752,774 - +0.1
752,837 + MPMX19_00730 0.23 -0.2
752,838 - MPMX19_00730 0.23 -0.6
752,838 - MPMX19_00730 0.23 -0.4
752,838 - MPMX19_00730 0.23 -1.8
752,838 - MPMX19_00730 0.23 -0.2
752,838 - MPMX19_00730 0.23 -0.6
752,838 - MPMX19_00730 0.23 -1.3
752,838 - MPMX19_00730 0.23 +0.5
752,885 - MPMX19_00730 0.33 -1.1
752,885 - MPMX19_00730 0.33 +0.2
752,885 - MPMX19_00730 0.33 -0.5
753,106 + MPMX19_00730 0.81 +2.8
753,106 + MPMX19_00730 0.81 +0.2
753,106 + MPMX19_00730 0.81 +0.5
753,106 + MPMX19_00730 0.81 -0.5
753,106 + MPMX19_00730 0.81 +1.5
753,106 + MPMX19_00730 0.81 -0.1
753,107 - MPMX19_00730 0.81 -0.4
753,107 - MPMX19_00730 0.81 +1.2
753,107 - MPMX19_00730 0.81 +0.5
753,107 - MPMX19_00730 0.81 -1.8
753,107 - MPMX19_00730 0.81 +0.8
753,107 - MPMX19_00730 0.81 -0.4
753,115 + MPMX19_00730 0.83 +0.4
753,115 + MPMX19_00730 0.83 +0.5
753,116 - MPMX19_00730 0.83 -2.8
753,116 - MPMX19_00730 0.83 +0.9
753,116 - MPMX19_00730 0.83 +0.5
753,204 + +0.6
753,204 + -1.6
753,204 + +0.5
753,204 + -0.3
753,204 + -0.8
753,204 + -0.5
753,205 - -1.9
753,205 - +1.4
753,256 + -0.3
753,256 + -1.1
753,257 - +0.6
753,257 - +0.3
753,257 - -1.4
753,257 - +0.8
753,257 - -1.1
753,257 - -2.4

Or see this region's nucleotide sequence