Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF906 and GFF907 are separated by 201 nucleotides GFF907 and GFF908 are separated by 619 nucleotides
GFF906 - hypothetical protein, at 975,112 to 976,770
GFF906
GFF907 - Aliphatic amidase expression-regulating protein, at 976,972 to 978,282
GFF907
GFF908 - Carbonic anhydrase 1, at 978,902 to 979,513
GFF908
Position (kb) 976
977
978
979 Strain fitness (log2 ratio) -2
-1
0
1 at 975.986 kb on + strand, within GFF906 at 975.987 kb on - strand, within GFF906 at 975.987 kb on - strand, within GFF906 at 976.500 kb on - strand, within GFF906 at 976.595 kb on + strand, within GFF906 at 976.595 kb on + strand, within GFF906 at 976.595 kb on + strand, within GFF906 at 976.596 kb on - strand, within GFF906 at 976.596 kb on - strand, within GFF906 at 976.596 kb on - strand, within GFF906 at 976.596 kb on - strand, within GFF906 at 976.747 kb on + strand at 976.879 kb on + strand at 976.879 kb on + strand at 976.894 kb on + strand at 976.973 kb on + strand at 976.973 kb on + strand at 976.974 kb on - strand at 977.030 kb on + strand at 977.072 kb on + strand at 977.309 kb on + strand, within GFF907 at 977.310 kb on - strand, within GFF907 at 977.310 kb on - strand, within GFF907 at 977.310 kb on - strand, within GFF907 at 977.310 kb on - strand, within GFF907 at 977.414 kb on + strand, within GFF907 at 977.414 kb on + strand, within GFF907 at 977.414 kb on + strand, within GFF907 at 977.415 kb on - strand, within GFF907 at 977.415 kb on - strand, within GFF907 at 977.415 kb on - strand, within GFF907 at 977.540 kb on + strand, within GFF907 at 977.541 kb on - strand, within GFF907 at 977.660 kb on + strand, within GFF907 at 977.660 kb on + strand, within GFF907 at 977.661 kb on - strand, within GFF907 at 977.744 kb on + strand, within GFF907 at 977.744 kb on + strand, within GFF907 at 977.744 kb on + strand, within GFF907 at 977.745 kb on - strand, within GFF907 at 977.795 kb on + strand, within GFF907 at 977.840 kb on + strand, within GFF907 at 977.841 kb on - strand, within GFF907 at 977.841 kb on - strand, within GFF907 at 977.841 kb on - strand, within GFF907 at 977.841 kb on - strand, within GFF907 at 977.874 kb on - strand, within GFF907 at 977.874 kb on - strand, within GFF907 at 977.885 kb on + strand, within GFF907 at 977.886 kb on - strand, within GFF907 at 977.886 kb on - strand, within GFF907 at 978.099 kb on + strand, within GFF907 at 978.099 kb on + strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.100 kb on - strand, within GFF907 at 978.387 kb on - strand at 978.526 kb on + strand at 978.527 kb on - strand at 978.527 kb on - strand at 978.528 kb on + strand at 978.529 kb on - strand at 978.531 kb on - strand at 978.709 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 975,986 + GFF906 0.53 -1.9 975,987 - GFF906 0.53 -0.8 975,987 - GFF906 0.53 +0.0 976,500 - GFF906 0.84 -0.2 976,595 + GFF906 0.89 -0.2 976,595 + GFF906 0.89 +0.3 976,595 + GFF906 0.89 -0.2 976,596 - GFF906 0.89 +0.1 976,596 - GFF906 0.89 +0.6 976,596 - GFF906 0.89 +1.0 976,596 - GFF906 0.89 -0.7 976,747 + +0.1 976,879 + -0.0 976,879 + +0.4 976,894 + -0.1 976,973 + +0.7 976,973 + -0.0 976,974 - -0.0 977,030 + +1.3 977,072 + +0.8 977,309 + GFF907 0.26 +0.2 977,310 - GFF907 0.26 -1.7 977,310 - GFF907 0.26 -0.3 977,310 - GFF907 0.26 -1.1 977,310 - GFF907 0.26 +0.3 977,414 + GFF907 0.34 +0.6 977,414 + GFF907 0.34 -0.0 977,414 + GFF907 0.34 -0.9 977,415 - GFF907 0.34 +0.4 977,415 - GFF907 0.34 -0.3 977,415 - GFF907 0.34 -0.0 977,540 + GFF907 0.43 -0.3 977,541 - GFF907 0.43 +0.5 977,660 + GFF907 0.52 +0.1 977,660 + GFF907 0.52 -0.7 977,661 - GFF907 0.53 -0.2 977,744 + GFF907 0.59 +0.5 977,744 + GFF907 0.59 -0.6 977,744 + GFF907 0.59 -0.4 977,745 - GFF907 0.59 -0.0 977,795 + GFF907 0.63 -0.4 977,840 + GFF907 0.66 -0.2 977,841 - GFF907 0.66 -0.1 977,841 - GFF907 0.66 +0.3 977,841 - GFF907 0.66 +0.5 977,841 - GFF907 0.66 -0.7 977,874 - GFF907 0.69 -1.0 977,874 - GFF907 0.69 -0.3 977,885 + GFF907 0.70 -0.7 977,886 - GFF907 0.70 -0.2 977,886 - GFF907 0.70 +0.6 978,099 + GFF907 0.86 -0.4 978,099 + GFF907 0.86 +0.1 978,100 - GFF907 0.86 +0.0 978,100 - GFF907 0.86 -1.0 978,100 - GFF907 0.86 +1.1 978,100 - GFF907 0.86 +0.2 978,100 - GFF907 0.86 -0.5 978,387 - -0.2 978,526 + -0.2 978,527 - +0.4 978,527 - +0.3 978,528 + -1.1 978,529 - +0.9 978,531 - -0.2 978,709 + +0.0
Or see this region's nucleotide sequence