Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF815 and GFF816 are separated by 33 nucleotides GFF816 and GFF817 overlap by 14 nucleotides GFF817 and GFF818 are separated by 481 nucleotides
GFF815 - Putative aliphatic sulfonates-binding protein, at 872,132 to 873,148
GFF815
GFF816 - Aliphatic sulfonates import ATP-binding protein SsuB, at 873,182 to 873,982
GFF816
GFF817 - Putative aliphatic sulfonates transport permease protein SsuC, at 873,969 to 874,859
GFF817
GFF818 - hypothetical protein, at 875,341 to 885,402
GFF818
Position (kb) 873
874
875 Strain fitness (log2 ratio) -1
0
1 at 872.970 kb on + strand, within GFF815 at 872.970 kb on + strand, within GFF815 at 873.031 kb on - strand, within GFF815 at 873.218 kb on + strand at 873.323 kb on + strand, within GFF816 at 873.970 kb on + strand at 873.970 kb on + strand at 873.970 kb on + strand at 873.970 kb on + strand at 873.971 kb on - strand at 873.971 kb on - strand at 874.318 kb on + strand, within GFF817 at 874.319 kb on - strand, within GFF817 at 874.330 kb on + strand, within GFF817 at 874.330 kb on + strand, within GFF817 at 874.429 kb on - strand, within GFF817 at 874.985 kb on + strand at 874.985 kb on + strand at 874.986 kb on - strand at 874.986 kb on - strand at 875.103 kb on + strand at 875.184 kb on - strand at 875.184 kb on - strand at 875.184 kb on - strand at 875.213 kb on + strand at 875.214 kb on - strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.452 kb on + strand at 875.453 kb on - strand at 875.812 kb on + strand at 875.813 kb on - strand at 875.813 kb on - strand at 875.813 kb on - strand at 875.815 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 872,970 + GFF815 0.82 +0.8 872,970 + GFF815 0.82 +0.1 873,031 - GFF815 0.88 -0.6 873,218 + +0.6 873,323 + GFF816 0.18 -0.7 873,970 + -1.2 873,970 + +0.3 873,970 + +0.4 873,970 + -1.0 873,971 - +1.3 873,971 - -0.4 874,318 + GFF817 0.39 +0.1 874,319 - GFF817 0.39 +0.6 874,330 + GFF817 0.41 +0.4 874,330 + GFF817 0.41 +0.1 874,429 - GFF817 0.52 +0.2 874,985 + +0.5 874,985 + +0.9 874,986 - +0.7 874,986 - +0.3 875,103 + -0.8 875,184 - +0.0 875,184 - +0.3 875,184 - +0.5 875,213 + -0.2 875,214 - -0.1 875,452 + -1.0 875,452 + -0.3 875,452 + +0.1 875,452 + -1.0 875,452 + +0.1 875,452 + -0.5 875,453 - +0.3 875,812 + +0.7 875,813 - -0.0 875,813 - +0.2 875,813 - +0.8 875,815 - -0.2
Or see this region's nucleotide sequence