Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF782 and GFF783 are separated by 34 nucleotides GFF783 and GFF784 are separated by 3 nucleotides GFF784 and GFF785 are separated by 31 nucleotides
GFF782 - hypothetical protein, at 834,732 to 835,796
GFF782
GFF783 - Aliphatic sulfonates import ATP-binding protein SsuB, at 835,831 to 836,613
GFF783
GFF784 - Putative aliphatic sulfonates transport permease protein SsuC, at 836,617 to 837,474
GFF784
GFF785 - putative FMNH2-dependent monooxygenase SfnC, at 837,506 to 838,723
GFF785
Position (kb) 836
837
838 Strain fitness (log2 ratio) -2
-1
0
1
2 at 835.895 kb on + strand at 836.158 kb on + strand, within GFF783 at 836.158 kb on + strand, within GFF783 at 836.159 kb on - strand, within GFF783 at 836.844 kb on - strand, within GFF784 at 836.844 kb on - strand, within GFF784 at 836.844 kb on - strand, within GFF784 at 836.984 kb on + strand, within GFF784 at 837.023 kb on + strand, within GFF784 at 837.114 kb on - strand, within GFF784 at 837.114 kb on - strand, within GFF784 at 837.816 kb on - strand, within GFF785 at 837.816 kb on - strand, within GFF785 at 837.837 kb on + strand, within GFF785 at 837.838 kb on - strand, within GFF785 at 837.838 kb on - strand, within GFF785 at 837.838 kb on - strand, within GFF785 at 837.967 kb on + strand, within GFF785 at 837.968 kb on - strand, within GFF785 at 837.968 kb on - strand, within GFF785 at 837.996 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.215 kb on + strand, within GFF785 at 838.216 kb on - strand, within GFF785 at 838.216 kb on - strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.221 kb on + strand, within GFF785 at 838.252 kb on - strand, within GFF785 at 838.300 kb on + strand, within GFF785
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 835,895 + -2.4 836,158 + GFF783 0.42 +1.2 836,158 + GFF783 0.42 -1.6 836,159 - GFF783 0.42 +0.2 836,844 - GFF784 0.26 +1.9 836,844 - GFF784 0.26 +0.3 836,844 - GFF784 0.26 -0.8 836,984 + GFF784 0.43 -0.3 837,023 + GFF784 0.47 -0.4 837,114 - GFF784 0.58 +0.0 837,114 - GFF784 0.58 +1.0 837,816 - GFF785 0.25 -0.1 837,816 - GFF785 0.25 -0.0 837,837 + GFF785 0.27 -1.4 837,838 - GFF785 0.27 -0.1 837,838 - GFF785 0.27 +0.9 837,838 - GFF785 0.27 -2.5 837,967 + GFF785 0.38 +0.8 837,968 - GFF785 0.38 -0.8 837,968 - GFF785 0.38 +0.8 837,996 + GFF785 0.40 -0.2 838,215 + GFF785 0.58 -0.3 838,215 + GFF785 0.58 +0.4 838,215 + GFF785 0.58 +0.6 838,215 + GFF785 0.58 +0.0 838,216 - GFF785 0.58 +1.9 838,216 - GFF785 0.58 -0.4 838,221 + GFF785 0.59 -0.9 838,221 + GFF785 0.59 +0.6 838,221 + GFF785 0.59 +0.5 838,221 + GFF785 0.59 -0.5 838,252 - GFF785 0.61 -0.2 838,300 + GFF785 0.65 -0.5
Or see this region's nucleotide sequence