Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF676 and GFF677 are separated by 191 nucleotides GFF677 and GFF678 are separated by 4 nucleotides GFF678 and GFF679 are separated by 17 nucleotides
GFF676 - ABC transporter glutamine-binding protein GlnH, at 726,138 to 726,953
GFF676
GFF677 - Glutamine transport ATP-binding protein GlnQ, at 727,145 to 727,975
GFF677
GFF678 - putative 2-dehydro-3-deoxygalactonokinase DgoK1, at 727,980 to 728,885
GFF678
GFF679 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 728,903 to 729,532
GFF679
Position (kb) 727
728 Strain fitness (log2 ratio) -1
0
1 at 726.339 kb on + strand, within GFF676 at 726.340 kb on - strand, within GFF676 at 726.372 kb on + strand, within GFF676 at 726.372 kb on + strand, within GFF676 at 726.372 kb on + strand, within GFF676 at 726.373 kb on - strand, within GFF676 at 726.427 kb on - strand, within GFF676 at 726.442 kb on - strand, within GFF676 at 726.513 kb on + strand, within GFF676 at 726.514 kb on - strand, within GFF676 at 726.807 kb on + strand, within GFF676 at 726.810 kb on - strand, within GFF676 at 727.039 kb on + strand at 727.039 kb on + strand at 727.039 kb on + strand at 727.039 kb on + strand at 727.040 kb on - strand at 727.040 kb on - strand at 727.040 kb on - strand at 727.174 kb on + strand at 727.274 kb on + strand, within GFF677 at 727.275 kb on - strand, within GFF677 at 727.275 kb on - strand, within GFF677 at 727.275 kb on - strand, within GFF677 at 727.277 kb on + strand, within GFF677 at 727.286 kb on + strand, within GFF677 at 727.287 kb on - strand, within GFF677 at 727.287 kb on - strand, within GFF677 at 727.287 kb on - strand, within GFF677 at 727.604 kb on + strand, within GFF677 at 727.604 kb on + strand, within GFF677 at 727.644 kb on - strand, within GFF677 at 727.644 kb on - strand, within GFF677 at 727.644 kb on - strand, within GFF677 at 728.031 kb on + strand at 728.031 kb on + strand at 728.032 kb on - strand at 728.032 kb on - strand at 728.220 kb on + strand, within GFF678 at 728.221 kb on - strand, within GFF678 at 728.221 kb on - strand, within GFF678 at 728.449 kb on + strand, within GFF678 at 728.481 kb on + strand, within GFF678
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 726,339 + GFF676 0.25 +0.1 726,340 - GFF676 0.25 +0.7 726,372 + GFF676 0.29 -0.5 726,372 + GFF676 0.29 -0.1 726,372 + GFF676 0.29 -0.3 726,373 - GFF676 0.29 -0.5 726,427 - GFF676 0.35 -1.2 726,442 - GFF676 0.37 +0.1 726,513 + GFF676 0.46 -1.1 726,514 - GFF676 0.46 -0.2 726,807 + GFF676 0.82 -0.5 726,810 - GFF676 0.82 -0.5 727,039 + +0.3 727,039 + +0.4 727,039 + -0.3 727,039 + -0.7 727,040 - -1.2 727,040 - -0.2 727,040 - +0.8 727,174 + -0.0 727,274 + GFF677 0.16 -0.2 727,275 - GFF677 0.16 +0.0 727,275 - GFF677 0.16 +0.5 727,275 - GFF677 0.16 -0.1 727,277 + GFF677 0.16 +0.6 727,286 + GFF677 0.17 -0.5 727,287 - GFF677 0.17 +0.0 727,287 - GFF677 0.17 -0.1 727,287 - GFF677 0.17 -0.2 727,604 + GFF677 0.55 -1.3 727,604 + GFF677 0.55 +0.5 727,644 - GFF677 0.60 -0.2 727,644 - GFF677 0.60 -0.7 727,644 - GFF677 0.60 +0.1 728,031 + -1.3 728,031 + -0.5 728,032 - +0.1 728,032 - +0.2 728,220 + GFF678 0.26 +0.3 728,221 - GFF678 0.27 -0.1 728,221 - GFF678 0.27 +0.8 728,449 + GFF678 0.52 +0.8 728,481 + GFF678 0.55 +0.3
Or see this region's nucleotide sequence