Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4918 and GFF4919 are separated by 138 nucleotides GFF4919 and GFF4920 are separated by 384 nucleotides GFF4920 and GFF4921 are separated by 339 nucleotides
GFF4918 - hypothetical protein, at 24,995 to 25,435
GFF4918
GFF4919 - hypothetical protein, at 25,574 to 25,741
GFF4919
GFF4920 - hypothetical protein, at 26,126 to 27,046
GFF4920
GFF4921 - hypothetical protein, at 27,386 to 28,423
GFF4921
Position (kb) 26
27
28 Strain fitness (log2 ratio) -1
0
1
2 at 25.143 kb on + strand, within GFF4918 at 25.143 kb on + strand, within GFF4918 at 25.155 kb on + strand, within GFF4918 at 25.156 kb on - strand, within GFF4918 at 25.156 kb on - strand, within GFF4918 at 25.315 kb on - strand, within GFF4918 at 25.372 kb on + strand, within GFF4918 at 25.391 kb on + strand, within GFF4918 at 25.391 kb on + strand, within GFF4918 at 25.394 kb on + strand at 25.394 kb on + strand at 25.395 kb on - strand at 25.395 kb on - strand at 25.395 kb on - strand at 25.395 kb on - strand at 25.395 kb on - strand at 25.396 kb on - strand at 25.505 kb on + strand at 25.505 kb on + strand at 25.506 kb on - strand at 25.506 kb on - strand at 25.531 kb on + strand at 25.537 kb on - strand at 25.537 kb on - strand at 25.563 kb on + strand at 25.563 kb on + strand at 25.563 kb on + strand at 25.563 kb on + strand at 25.564 kb on - strand at 25.564 kb on - strand at 25.564 kb on - strand at 25.851 kb on + strand at 25.851 kb on + strand at 25.852 kb on - strand at 25.904 kb on + strand at 25.904 kb on + strand at 25.905 kb on - strand at 26.070 kb on + strand at 26.070 kb on + strand at 26.135 kb on - strand at 26.152 kb on - strand at 26.188 kb on + strand at 26.188 kb on + strand at 26.189 kb on - strand at 26.791 kb on + strand, within GFF4920 at 26.977 kb on - strand at 26.977 kb on - strand at 27.327 kb on + strand at 27.600 kb on + strand, within GFF4921 at 27.600 kb on + strand, within GFF4921 at 27.601 kb on - strand, within GFF4921 at 27.601 kb on - strand, within GFF4921 at 27.601 kb on - strand, within GFF4921 at 27.930 kb on + strand, within GFF4921 at 27.930 kb on + strand, within GFF4921 at 27.931 kb on - strand, within GFF4921 at 27.931 kb on - strand, within GFF4921 at 27.933 kb on + strand, within GFF4921 at 27.934 kb on - strand, within GFF4921 at 27.934 kb on - strand, within GFF4921 at 27.934 kb on - strand, within GFF4921 at 27.934 kb on - strand, within GFF4921 at 27.999 kb on + strand, within GFF4921 at 27.999 kb on + strand, within GFF4921 at 27.999 kb on + strand, within GFF4921 at 28.007 kb on + strand, within GFF4921
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 25,143 + GFF4918 0.34 -1.0 25,143 + GFF4918 0.34 -0.2 25,155 + GFF4918 0.36 +0.2 25,156 - GFF4918 0.37 +0.4 25,156 - GFF4918 0.37 +0.4 25,315 - GFF4918 0.73 +0.2 25,372 + GFF4918 0.85 +1.0 25,391 + GFF4918 0.90 +0.2 25,391 + GFF4918 0.90 -0.5 25,394 + +0.2 25,394 + +0.7 25,395 - -0.7 25,395 - +1.4 25,395 - +0.8 25,395 - +0.4 25,395 - +0.5 25,396 - -0.1 25,505 + +0.9 25,505 + +0.4 25,506 - -0.3 25,506 - +0.7 25,531 + -0.4 25,537 - +0.1 25,537 - -1.3 25,563 + -0.4 25,563 + +0.9 25,563 + +0.9 25,563 + -0.6 25,564 - -1.1 25,564 - -0.2 25,564 - +0.1 25,851 + +0.3 25,851 + +0.1 25,852 - +0.3 25,904 + +1.0 25,904 + +1.0 25,905 - +0.5 26,070 + -0.0 26,070 + -0.5 26,135 - +0.3 26,152 - -0.9 26,188 + +0.9 26,188 + -0.1 26,189 - -0.4 26,791 + GFF4920 0.72 -0.1 26,977 - +0.9 26,977 - -0.4 27,327 + +0.4 27,600 + GFF4921 0.21 +0.1 27,600 + GFF4921 0.21 -0.1 27,601 - GFF4921 0.21 +0.7 27,601 - GFF4921 0.21 +0.1 27,601 - GFF4921 0.21 -0.1 27,930 + GFF4921 0.52 -0.3 27,930 + GFF4921 0.52 +1.0 27,931 - GFF4921 0.53 -0.1 27,931 - GFF4921 0.53 -0.2 27,933 + GFF4921 0.53 +0.2 27,934 - GFF4921 0.53 -0.0 27,934 - GFF4921 0.53 -0.2 27,934 - GFF4921 0.53 +2.3 27,934 - GFF4921 0.53 +1.7 27,999 + GFF4921 0.59 +0.9 27,999 + GFF4921 0.59 +0.7 27,999 + GFF4921 0.59 -0.4 28,007 + GFF4921 0.60 -0.2
Or see this region's nucleotide sequence