Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4761 and GFF4762 are separated by 187 nucleotides
GFF4761 - hypothetical protein, at 174,521 to 175,576
GFF4761
GFF4762 - hypothetical protein, at 175,764 to 178,316
GFF4762
Position (kb) 175
176
177
178
179 Strain fitness (log2 ratio) -1
0
1 at 174.765 kb on - strand, within GFF4761 at 174.846 kb on - strand, within GFF4761 at 174.846 kb on - strand, within GFF4761 at 175.230 kb on - strand, within GFF4761 at 175.230 kb on - strand, within GFF4761 at 175.400 kb on + strand, within GFF4761 at 175.400 kb on + strand, within GFF4761 at 175.400 kb on + strand, within GFF4761 at 175.400 kb on + strand, within GFF4761 at 175.400 kb on + strand, within GFF4761 at 175.400 kb on + strand, within GFF4761 at 175.401 kb on - strand, within GFF4761 at 175.401 kb on - strand, within GFF4761 at 175.401 kb on - strand, within GFF4761 at 175.401 kb on - strand, within GFF4761 at 175.403 kb on + strand, within GFF4761 at 175.404 kb on - strand, within GFF4761 at 175.404 kb on - strand, within GFF4761 at 175.494 kb on - strand at 175.572 kb on - strand at 176.166 kb on + strand, within GFF4762 at 176.166 kb on + strand, within GFF4762 at 176.167 kb on - strand, within GFF4762 at 176.167 kb on - strand, within GFF4762 at 176.167 kb on - strand, within GFF4762 at 176.219 kb on + strand, within GFF4762 at 177.285 kb on + strand, within GFF4762 at 177.286 kb on - strand, within GFF4762 at 177.286 kb on - strand, within GFF4762 at 177.492 kb on + strand, within GFF4762 at 177.493 kb on - strand, within GFF4762 at 177.493 kb on - strand, within GFF4762 at 177.877 kb on + strand, within GFF4762 at 178.303 kb on - strand at 178.422 kb on - strand at 178.509 kb on + strand at 178.510 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 174,765 - GFF4761 0.23 +0.7 174,846 - GFF4761 0.31 +0.4 174,846 - GFF4761 0.31 -0.5 175,230 - GFF4761 0.67 -0.2 175,230 - GFF4761 0.67 +0.0 175,400 + GFF4761 0.83 -0.1 175,400 + GFF4761 0.83 +0.4 175,400 + GFF4761 0.83 +0.1 175,400 + GFF4761 0.83 -0.1 175,400 + GFF4761 0.83 -0.1 175,400 + GFF4761 0.83 -0.1 175,401 - GFF4761 0.83 -0.1 175,401 - GFF4761 0.83 +0.5 175,401 - GFF4761 0.83 -0.1 175,401 - GFF4761 0.83 -0.6 175,403 + GFF4761 0.84 -0.6 175,404 - GFF4761 0.84 +0.1 175,404 - GFF4761 0.84 +0.1 175,494 - +0.2 175,572 - +0.1 176,166 + GFF4762 0.16 -1.1 176,166 + GFF4762 0.16 -0.0 176,167 - GFF4762 0.16 +1.5 176,167 - GFF4762 0.16 +0.0 176,167 - GFF4762 0.16 -0.6 176,219 + GFF4762 0.18 +0.7 177,285 + GFF4762 0.60 +0.2 177,286 - GFF4762 0.60 -0.8 177,286 - GFF4762 0.60 +0.0 177,492 + GFF4762 0.68 -0.2 177,493 - GFF4762 0.68 +0.7 177,493 - GFF4762 0.68 -1.5 177,877 + GFF4762 0.83 -0.5 178,303 - -0.4 178,422 - +0.6 178,509 + +0.2 178,510 - -0.4
Or see this region's nucleotide sequence