Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4410 and GFF4411 are separated by 252 nucleotides GFF4411 and GFF4412 are separated by 719 nucleotides
GFF4410 - Succinate--CoA ligase [ADP-forming] subunit beta, at 216,501 to 217,703
GFF4410
GFF4411 - Malate dehydrogenase, at 217,956 to 218,921
GFF4411
GFF4412 - Nitrogenase-stabilizing/protective protein NifW, at 219,641 to 219,982
GFF4412
Position (kb) 217
218
219 Strain fitness (log2 ratio) -1
0
1 at 216.987 kb on - strand, within GFF4410 at 217.121 kb on - strand, within GFF4410 at 217.121 kb on - strand, within GFF4410 at 217.349 kb on - strand, within GFF4410 at 217.349 kb on - strand, within GFF4410 at 217.349 kb on - strand, within GFF4410 at 217.349 kb on - strand, within GFF4410 at 217.698 kb on - strand at 217.698 kb on - strand at 217.698 kb on - strand at 218.070 kb on - strand, within GFF4411 at 218.113 kb on + strand, within GFF4411 at 218.114 kb on - strand, within GFF4411 at 218.224 kb on + strand, within GFF4411 at 218.225 kb on - strand, within GFF4411 at 218.225 kb on - strand, within GFF4411 at 218.225 kb on - strand, within GFF4411 at 218.366 kb on - strand, within GFF4411 at 218.726 kb on - strand, within GFF4411 at 218.991 kb on - strand at 219.034 kb on + strand at 219.034 kb on + strand at 219.035 kb on - strand at 219.237 kb on + strand at 219.238 kb on - strand at 219.278 kb on + strand at 219.279 kb on - strand at 219.279 kb on - strand at 219.359 kb on - strand at 219.505 kb on - strand at 219.524 kb on - strand at 219.524 kb on - strand at 219.524 kb on - strand at 219.524 kb on - strand at 219.524 kb on - strand at 219.777 kb on + strand, within GFF4412 at 219.778 kb on - strand, within GFF4412 at 219.778 kb on - strand, within GFF4412 at 219.778 kb on - strand, within GFF4412 at 219.778 kb on - strand, within GFF4412 at 219.778 kb on - strand, within GFF4412 at 219.778 kb on - strand, within GFF4412 at 219.810 kb on + strand, within GFF4412 at 219.811 kb on - strand, within GFF4412 at 219.811 kb on - strand, within GFF4412 at 219.855 kb on + strand, within GFF4412 at 219.856 kb on - strand, within GFF4412 at 219.856 kb on - strand, within GFF4412 at 219.856 kb on - strand, within GFF4412 at 219.912 kb on + strand, within GFF4412
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 216,987 - GFF4410 0.40 -0.9 217,121 - GFF4410 0.52 +0.7 217,121 - GFF4410 0.52 -0.6 217,349 - GFF4410 0.70 -1.3 217,349 - GFF4410 0.70 -1.6 217,349 - GFF4410 0.70 -0.1 217,349 - GFF4410 0.70 -0.3 217,698 - +0.7 217,698 - +1.0 217,698 - +0.4 218,070 - GFF4411 0.12 -0.2 218,113 + GFF4411 0.16 +0.1 218,114 - GFF4411 0.16 +0.1 218,224 + GFF4411 0.28 +0.2 218,225 - GFF4411 0.28 -0.5 218,225 - GFF4411 0.28 -0.4 218,225 - GFF4411 0.28 +0.7 218,366 - GFF4411 0.42 +0.4 218,726 - GFF4411 0.80 +1.5 218,991 - +0.1 219,034 + -0.7 219,034 + -0.8 219,035 - +0.2 219,237 + +0.3 219,238 - +0.3 219,278 + -1.6 219,279 - +1.0 219,279 - +0.3 219,359 - -0.2 219,505 - -0.4 219,524 - +0.5 219,524 - +0.5 219,524 - +0.4 219,524 - +1.2 219,524 - +0.1 219,777 + GFF4412 0.40 +0.7 219,778 - GFF4412 0.40 +0.3 219,778 - GFF4412 0.40 +1.1 219,778 - GFF4412 0.40 +0.1 219,778 - GFF4412 0.40 +1.4 219,778 - GFF4412 0.40 -1.1 219,778 - GFF4412 0.40 +0.1 219,810 + GFF4412 0.49 -0.1 219,811 - GFF4412 0.50 -0.6 219,811 - GFF4412 0.50 -0.6 219,855 + GFF4412 0.63 -0.6 219,856 - GFF4412 0.63 -0.1 219,856 - GFF4412 0.63 +0.2 219,856 - GFF4412 0.63 -0.7 219,912 + GFF4412 0.79 -0.9
Or see this region's nucleotide sequence