Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4369 and GFF4370 are separated by 68 nucleotides GFF4370 and GFF4371 are separated by 153 nucleotides
GFF4369 - hypothetical protein, at 157,137 to 160,850
GFF4369
GFF4370 - hypothetical protein, at 160,919 to 161,293
GFF4370
GFF4371 - hypothetical protein, at 161,447 to 162,286
GFF4371
Position (kb) 160
161
162 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 159.948 kb on + strand, within GFF4369 at 159.949 kb on - strand, within GFF4369 at 159.950 kb on + strand, within GFF4369 at 159.951 kb on - strand, within GFF4369 at 159.951 kb on - strand, within GFF4369 at 160.026 kb on + strand, within GFF4369 at 160.173 kb on + strand, within GFF4369 at 160.173 kb on + strand, within GFF4369 at 160.173 kb on + strand, within GFF4369 at 160.174 kb on - strand, within GFF4369 at 160.174 kb on - strand, within GFF4369 at 160.174 kb on - strand, within GFF4369 at 160.174 kb on - strand, within GFF4369 at 160.239 kb on - strand, within GFF4369 at 160.405 kb on - strand, within GFF4369 at 160.405 kb on - strand, within GFF4369 at 160.410 kb on + strand, within GFF4369 at 160.411 kb on - strand, within GFF4369 at 160.414 kb on - strand, within GFF4369 at 160.606 kb on - strand at 160.822 kb on - strand at 160.975 kb on + strand, within GFF4370 at 160.975 kb on + strand, within GFF4370 at 160.975 kb on + strand, within GFF4370 at 160.976 kb on - strand, within GFF4370 at 161.132 kb on - strand, within GFF4370 at 161.146 kb on - strand, within GFF4370 at 161.346 kb on - strand at 161.346 kb on - strand at 161.433 kb on - strand at 161.515 kb on - strand at 161.515 kb on - strand at 161.531 kb on - strand, within GFF4371 at 161.778 kb on + strand, within GFF4371 at 161.848 kb on - strand, within GFF4371 at 161.985 kb on + strand, within GFF4371 at 161.985 kb on + strand, within GFF4371 at 161.985 kb on + strand, within GFF4371 at 161.986 kb on - strand, within GFF4371 at 161.988 kb on + strand, within GFF4371 at 161.989 kb on - strand, within GFF4371 at 161.989 kb on - strand, within GFF4371 at 162.168 kb on + strand, within GFF4371 at 162.168 kb on + strand, within GFF4371 at 162.168 kb on + strand, within GFF4371 at 162.168 kb on + strand, within GFF4371 at 162.169 kb on - strand, within GFF4371 at 162.184 kb on + strand, within GFF4371 at 162.185 kb on - strand, within GFF4371 at 162.185 kb on - strand, within GFF4371 at 162.185 kb on - strand, within GFF4371 at 162.201 kb on + strand, within GFF4371
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 159,948 + GFF4369 0.76 -1.1 159,949 - GFF4369 0.76 -1.2 159,950 + GFF4369 0.76 -1.5 159,951 - GFF4369 0.76 -0.4 159,951 - GFF4369 0.76 +1.0 160,026 + GFF4369 0.78 -1.2 160,173 + GFF4369 0.82 -0.1 160,173 + GFF4369 0.82 -0.6 160,173 + GFF4369 0.82 -0.3 160,174 - GFF4369 0.82 -0.8 160,174 - GFF4369 0.82 -1.4 160,174 - GFF4369 0.82 -0.8 160,174 - GFF4369 0.82 -0.5 160,239 - GFF4369 0.84 -3.2 160,405 - GFF4369 0.88 -0.8 160,405 - GFF4369 0.88 +0.4 160,410 + GFF4369 0.88 -1.5 160,411 - GFF4369 0.88 -0.3 160,414 - GFF4369 0.88 +0.5 160,606 - -0.9 160,822 - -0.4 160,975 + GFF4370 0.15 -0.4 160,975 + GFF4370 0.15 -0.1 160,975 + GFF4370 0.15 +0.5 160,976 - GFF4370 0.15 +1.0 161,132 - GFF4370 0.57 -0.1 161,146 - GFF4370 0.61 -0.2 161,346 - +0.9 161,346 - +0.2 161,433 - +0.6 161,515 - +0.5 161,515 - -0.8 161,531 - GFF4371 0.10 -1.0 161,778 + GFF4371 0.39 +0.4 161,848 - GFF4371 0.48 -0.4 161,985 + GFF4371 0.64 -0.6 161,985 + GFF4371 0.64 +0.7 161,985 + GFF4371 0.64 -0.2 161,986 - GFF4371 0.64 -0.2 161,988 + GFF4371 0.64 +0.4 161,989 - GFF4371 0.65 -0.0 161,989 - GFF4371 0.65 +0.7 162,168 + GFF4371 0.86 +0.1 162,168 + GFF4371 0.86 -0.1 162,168 + GFF4371 0.86 -0.0 162,168 + GFF4371 0.86 -1.6 162,169 - GFF4371 0.86 +0.3 162,184 + GFF4371 0.88 -0.3 162,185 - GFF4371 0.88 +0.5 162,185 - GFF4371 0.88 -0.1 162,185 - GFF4371 0.88 -0.4 162,201 + GFF4371 0.90 -1.2
Or see this region's nucleotide sequence