Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4317 and GFF4318 are separated by 8 nucleotides GFF4318 and GFF4319 are separated by 138 nucleotides GFF4319 and GFF4320 are separated by 147 nucleotides GFF4320 and GFF4321 are separated by 110 nucleotides
GFF4317 - Dihydroorotate dehydrogenase (quinone), at 96,685 to 97,755
GFF4317
GFF4318 - Orotate phosphoribosyltransferase, at 97,764 to 98,462
GFF4318
GFF4319 - hypothetical protein, at 98,601 to 99,848
GFF4319
GFF4320 - 2-hydroxychromene-2-carboxylate isomerase, at 99,996 to 100,610
GFF4320
GFF4321 - hypothetical protein, at 100,721 to 101,470
GFF4321
Position (kb) 98
99
100 Strain fitness (log2 ratio) -2
-1
0
1 at 98.509 kb on - strand at 98.509 kb on - strand at 98.509 kb on - strand at 98.511 kb on - strand at 98.511 kb on - strand at 98.644 kb on + strand at 98.645 kb on - strand at 99.328 kb on + strand, within GFF4319 at 99.329 kb on - strand, within GFF4319 at 99.626 kb on - strand, within GFF4319 at 99.664 kb on + strand, within GFF4319 at 99.664 kb on + strand, within GFF4319 at 99.796 kb on + strand at 99.797 kb on - strand at 99.797 kb on - strand at 99.797 kb on - strand at 99.797 kb on - strand at 99.838 kb on - strand at 100.415 kb on + strand, within GFF4320 at 100.415 kb on + strand, within GFF4320 at 100.436 kb on - strand, within GFF4320 at 100.459 kb on + strand, within GFF4320 at 100.460 kb on - strand, within GFF4320 at 100.558 kb on + strand at 100.565 kb on - strand at 100.582 kb on + strand at 100.585 kb on + strand at 100.585 kb on + strand at 100.627 kb on + strand at 100.628 kb on - strand at 100.628 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 98,509 - +0.0 98,509 - -0.0 98,509 - -0.2 98,511 - +0.4 98,511 - -0.1 98,644 + +0.3 98,645 - +0.1 99,328 + GFF4319 0.58 -0.2 99,329 - GFF4319 0.58 +0.4 99,626 - GFF4319 0.82 -0.2 99,664 + GFF4319 0.85 -0.6 99,664 + GFF4319 0.85 -1.1 99,796 + -0.5 99,797 - -1.6 99,797 - +0.1 99,797 - -0.1 99,797 - -2.3 99,838 - +0.5 100,415 + GFF4320 0.68 -0.2 100,415 + GFF4320 0.68 -0.1 100,436 - GFF4320 0.72 +1.0 100,459 + GFF4320 0.75 +0.0 100,460 - GFF4320 0.75 -1.4 100,558 + +0.4 100,565 - +0.6 100,582 + +0.2 100,585 + -0.2 100,585 + +0.3 100,627 + -0.4 100,628 - -0.3 100,628 - +0.2
Or see this region's nucleotide sequence