Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4206 and GFF4207 are separated by 2 nucleotides GFF4207 and GFF4208 are separated by 10 nucleotides
GFF4206 - Phosphate acetyltransferase, at 231,467 to 232,459
GFF4206
GFF4207 - Acetate kinase, at 232,462 to 233,673
GFF4207
GFF4208 - hypothetical protein, at 233,684 to 235,975
GFF4208
Position (kb) 232
233
234 Strain fitness (log2 ratio) -1
0
1
2 at 231.527 kb on + strand at 231.528 kb on - strand at 232.556 kb on - strand at 232.681 kb on + strand, within GFF4207 at 232.765 kb on + strand, within GFF4207 at 232.766 kb on - strand, within GFF4207 at 232.766 kb on - strand, within GFF4207 at 232.766 kb on - strand, within GFF4207 at 232.996 kb on + strand, within GFF4207 at 233.017 kb on + strand, within GFF4207 at 233.023 kb on + strand, within GFF4207 at 233.116 kb on + strand, within GFF4207 at 233.116 kb on + strand, within GFF4207 at 233.116 kb on + strand, within GFF4207 at 233.116 kb on + strand, within GFF4207 at 233.219 kb on - strand, within GFF4207 at 233.269 kb on + strand, within GFF4207 at 233.269 kb on + strand, within GFF4207 at 233.270 kb on - strand, within GFF4207 at 233.270 kb on - strand, within GFF4207 at 233.271 kb on + strand, within GFF4207 at 233.584 kb on + strand at 233.585 kb on - strand at 233.585 kb on - strand at 233.585 kb on - strand at 233.712 kb on - strand at 233.712 kb on - strand at 233.732 kb on + strand at 233.733 kb on - strand at 233.765 kb on + strand at 233.856 kb on - strand at 233.856 kb on - strand at 233.969 kb on + strand, within GFF4208 at 233.969 kb on + strand, within GFF4208 at 233.969 kb on + strand, within GFF4208 at 233.970 kb on - strand, within GFF4208 at 233.979 kb on + strand, within GFF4208 at 233.979 kb on + strand, within GFF4208 at 234.014 kb on + strand, within GFF4208 at 234.015 kb on - strand, within GFF4208 at 234.015 kb on - strand, within GFF4208 at 234.173 kb on + strand, within GFF4208 at 234.174 kb on - strand, within GFF4208 at 234.174 kb on - strand, within GFF4208 at 234.174 kb on - strand, within GFF4208 at 234.392 kb on + strand, within GFF4208 at 234.428 kb on + strand, within GFF4208 at 234.507 kb on - strand, within GFF4208 at 234.507 kb on - strand, within GFF4208 at 234.507 kb on - strand, within GFF4208 at 234.507 kb on - strand, within GFF4208 at 234.549 kb on - strand, within GFF4208 at 234.560 kb on + strand, within GFF4208 at 234.564 kb on - strand, within GFF4208
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 231,527 + -0.9 231,528 - +0.2 232,556 - -0.2 232,681 + GFF4207 0.18 -0.9 232,765 + GFF4207 0.25 -0.5 232,766 - GFF4207 0.25 -0.3 232,766 - GFF4207 0.25 +1.0 232,766 - GFF4207 0.25 -1.2 232,996 + GFF4207 0.44 -0.0 233,017 + GFF4207 0.46 -0.4 233,023 + GFF4207 0.46 -0.0 233,116 + GFF4207 0.54 +0.1 233,116 + GFF4207 0.54 +0.6 233,116 + GFF4207 0.54 -0.6 233,116 + GFF4207 0.54 -0.8 233,219 - GFF4207 0.62 -0.1 233,269 + GFF4207 0.67 +1.8 233,269 + GFF4207 0.67 -0.8 233,270 - GFF4207 0.67 +0.4 233,270 - GFF4207 0.67 +0.5 233,271 + GFF4207 0.67 -0.4 233,584 + -0.7 233,585 - -0.4 233,585 - +0.2 233,585 - +0.1 233,712 - +0.9 233,712 - +0.0 233,732 + -1.3 233,733 - +1.5 233,765 + +0.5 233,856 - +0.2 233,856 - -0.5 233,969 + GFF4208 0.12 -0.5 233,969 + GFF4208 0.12 -1.3 233,969 + GFF4208 0.12 -0.6 233,970 - GFF4208 0.12 +0.1 233,979 + GFF4208 0.13 +0.3 233,979 + GFF4208 0.13 +0.1 234,014 + GFF4208 0.14 +0.7 234,015 - GFF4208 0.14 +1.5 234,015 - GFF4208 0.14 -0.6 234,173 + GFF4208 0.21 +0.3 234,174 - GFF4208 0.21 -0.1 234,174 - GFF4208 0.21 +0.3 234,174 - GFF4208 0.21 +0.3 234,392 + GFF4208 0.31 +0.0 234,428 + GFF4208 0.32 -0.8 234,507 - GFF4208 0.36 +0.6 234,507 - GFF4208 0.36 -0.1 234,507 - GFF4208 0.36 -1.3 234,507 - GFF4208 0.36 -0.2 234,549 - GFF4208 0.38 -0.6 234,560 + GFF4208 0.38 -0.9 234,564 - GFF4208 0.38 +0.1
Or see this region's nucleotide sequence