Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4130 and GFF4131 are separated by 99 nucleotides GFF4131 and GFF4132 overlap by 32 nucleotides
GFF4130 - Adaptive-response sensory-kinase SasA, at 134,466 to 136,034
GFF4130
GFF4131 - hypothetical protein, at 136,134 to 136,517
GFF4131
GFF4132 - PTS system mannose-specific EIIAB component, at 136,486 to 136,887
GFF4132
Position (kb) 134
135
136
137 Strain fitness (log2 ratio) -1
0
1 at 133.578 kb on + strand at 133.578 kb on + strand at 133.579 kb on - strand at 133.579 kb on - strand at 133.630 kb on + strand at 133.630 kb on + strand at 133.630 kb on + strand at 133.631 kb on - strand at 133.631 kb on - strand at 133.631 kb on - strand at 133.632 kb on + strand at 133.633 kb on - strand at 133.633 kb on - strand at 133.633 kb on - strand at 133.966 kb on + strand at 133.967 kb on - strand at 133.967 kb on - strand at 134.033 kb on - strand at 134.041 kb on - strand at 134.207 kb on + strand at 134.468 kb on - strand at 135.016 kb on + strand, within GFF4130 at 135.016 kb on + strand, within GFF4130 at 135.016 kb on + strand, within GFF4130 at 135.016 kb on + strand, within GFF4130 at 135.017 kb on - strand, within GFF4130 at 135.017 kb on - strand, within GFF4130 at 135.126 kb on - strand, within GFF4130 at 135.370 kb on + strand, within GFF4130 at 135.370 kb on + strand, within GFF4130 at 135.370 kb on + strand, within GFF4130 at 135.370 kb on + strand, within GFF4130 at 135.370 kb on + strand, within GFF4130 at 135.371 kb on - strand, within GFF4130 at 135.371 kb on - strand, within GFF4130 at 135.799 kb on + strand, within GFF4130 at 135.929 kb on + strand at 135.929 kb on + strand at 135.929 kb on + strand at 135.930 kb on - strand at 135.953 kb on + strand at 135.953 kb on + strand at 135.954 kb on - strand at 135.954 kb on - strand at 135.960 kb on + strand at 136.018 kb on - strand at 136.024 kb on + strand at 136.024 kb on + strand at 136.025 kb on - strand at 136.025 kb on - strand at 136.025 kb on - strand at 136.069 kb on - strand at 136.135 kb on + strand at 136.136 kb on - strand at 136.491 kb on + strand at 136.492 kb on - strand at 136.523 kb on + strand at 136.523 kb on + strand at 136.524 kb on - strand at 136.767 kb on + strand, within GFF4132
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 133,578 + -0.6 133,578 + +0.3 133,579 - -0.9 133,579 - -0.1 133,630 + +0.2 133,630 + -1.1 133,630 + +0.1 133,631 - -0.2 133,631 - +0.1 133,631 - -0.8 133,632 + +0.8 133,633 - +0.3 133,633 - +1.2 133,633 - +0.9 133,966 + -0.4 133,967 - +0.7 133,967 - +0.9 134,033 - +0.7 134,041 - -0.1 134,207 + +0.2 134,468 - -0.1 135,016 + GFF4130 0.35 +0.1 135,016 + GFF4130 0.35 -0.4 135,016 + GFF4130 0.35 -0.5 135,016 + GFF4130 0.35 +0.1 135,017 - GFF4130 0.35 -0.4 135,017 - GFF4130 0.35 -0.3 135,126 - GFF4130 0.42 +1.7 135,370 + GFF4130 0.58 -0.1 135,370 + GFF4130 0.58 +0.8 135,370 + GFF4130 0.58 +0.5 135,370 + GFF4130 0.58 +1.3 135,370 + GFF4130 0.58 +0.7 135,371 - GFF4130 0.58 +0.2 135,371 - GFF4130 0.58 +1.1 135,799 + GFF4130 0.85 -0.2 135,929 + -0.0 135,929 + -0.2 135,929 + -0.4 135,930 - -0.0 135,953 + -0.1 135,953 + +0.3 135,954 - +1.1 135,954 - +0.6 135,960 + +0.3 136,018 - +0.8 136,024 + -0.6 136,024 + -0.9 136,025 - +0.2 136,025 - +0.2 136,025 - +0.5 136,069 - -0.4 136,135 + -0.0 136,136 - -1.6 136,491 + +0.7 136,492 - +0.1 136,523 + +0.8 136,523 + +1.2 136,524 - +0.9 136,767 + GFF4132 0.70 +0.4
Or see this region's nucleotide sequence