Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4076 and GFF4077 overlap by 4 nucleotides GFF4077 and GFF4078 are separated by 89 nucleotides
GFF4076 - (S)-sulfolactate dehydrogenase, at 68,594 to 69,529
GFF4076
GFF4077 - (2R)-3-sulfolactate dehydrogenase (NADP(+)), at 69,526 to 70,530
GFF4077
GFF4078 - (2R)-sulfolactate sulfo-lyase subunit beta, at 70,620 to 71,900
GFF4078
Position (kb) 69
70
71 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 68.566 kb on + strand at 68.567 kb on - strand at 68.569 kb on - strand at 68.669 kb on + strand at 68.825 kb on - strand, within GFF4076 at 68.827 kb on + strand, within GFF4076 at 68.906 kb on + strand, within GFF4076 at 68.906 kb on + strand, within GFF4076 at 68.906 kb on + strand, within GFF4076 at 68.907 kb on - strand, within GFF4076 at 68.907 kb on - strand, within GFF4076 at 68.907 kb on - strand, within GFF4076 at 68.911 kb on + strand, within GFF4076 at 68.912 kb on - strand, within GFF4076 at 68.912 kb on - strand, within GFF4076 at 68.946 kb on - strand, within GFF4076 at 69.685 kb on + strand, within GFF4077 at 70.370 kb on - strand, within GFF4077 at 70.370 kb on - strand, within GFF4077 at 70.559 kb on + strand at 70.559 kb on + strand at 70.559 kb on + strand at 70.560 kb on - strand at 70.560 kb on - strand at 70.784 kb on + strand, within GFF4078 at 70.785 kb on - strand, within GFF4078 at 70.785 kb on - strand, within GFF4078 at 70.890 kb on + strand, within GFF4078 at 70.890 kb on + strand, within GFF4078 at 70.890 kb on + strand, within GFF4078 at 70.890 kb on + strand, within GFF4078 at 70.891 kb on - strand, within GFF4078 at 70.891 kb on - strand, within GFF4078 at 70.891 kb on - strand, within GFF4078 at 70.891 kb on - strand, within GFF4078 at 70.891 kb on - strand, within GFF4078 at 70.894 kb on + strand, within GFF4078 at 70.951 kb on + strand, within GFF4078 at 70.951 kb on + strand, within GFF4078 at 70.951 kb on + strand, within GFF4078 at 70.951 kb on + strand, within GFF4078 at 70.951 kb on + strand, within GFF4078 at 70.952 kb on - strand, within GFF4078 at 70.952 kb on - strand, within GFF4078 at 70.952 kb on - strand, within GFF4078 at 70.954 kb on + strand, within GFF4078 at 70.955 kb on - strand, within GFF4078 at 71.005 kb on + strand, within GFF4078 at 71.006 kb on - strand, within GFF4078 at 71.147 kb on - strand, within GFF4078 at 71.254 kb on + strand, within GFF4078 at 71.254 kb on + strand, within GFF4078 at 71.255 kb on - strand, within GFF4078 at 71.281 kb on + strand, within GFF4078 at 71.281 kb on + strand, within GFF4078 at 71.281 kb on + strand, within GFF4078 at 71.281 kb on + strand, within GFF4078 at 71.281 kb on + strand, within GFF4078 at 71.282 kb on - strand, within GFF4078 at 71.282 kb on - strand, within GFF4078 at 71.422 kb on + strand, within GFF4078 at 71.422 kb on + strand, within GFF4078 at 71.423 kb on - strand, within GFF4078 at 71.423 kb on - strand, within GFF4078 at 71.423 kb on - strand, within GFF4078 at 71.519 kb on + strand, within GFF4078 at 71.520 kb on - strand, within GFF4078 at 71.520 kb on - strand, within GFF4078
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 68,566 + +0.1 68,567 - -0.8 68,569 - +0.1 68,669 + +0.1 68,825 - GFF4076 0.25 +0.2 68,827 + GFF4076 0.25 +0.7 68,906 + GFF4076 0.33 -0.7 68,906 + GFF4076 0.33 -0.8 68,906 + GFF4076 0.33 +0.4 68,907 - GFF4076 0.33 -1.1 68,907 - GFF4076 0.33 -0.5 68,907 - GFF4076 0.33 -1.3 68,911 + GFF4076 0.34 +0.5 68,912 - GFF4076 0.34 +0.5 68,912 - GFF4076 0.34 +0.1 68,946 - GFF4076 0.38 -0.9 69,685 + GFF4077 0.16 +0.4 70,370 - GFF4077 0.84 -0.5 70,370 - GFF4077 0.84 +0.8 70,559 + +0.2 70,559 + +0.2 70,559 + -0.5 70,560 - +0.3 70,560 - +0.9 70,784 + GFF4078 0.13 +0.3 70,785 - GFF4078 0.13 +0.5 70,785 - GFF4078 0.13 +0.1 70,890 + GFF4078 0.21 +0.1 70,890 + GFF4078 0.21 -0.2 70,890 + GFF4078 0.21 -0.2 70,890 + GFF4078 0.21 -0.3 70,891 - GFF4078 0.21 -0.2 70,891 - GFF4078 0.21 -0.8 70,891 - GFF4078 0.21 -0.3 70,891 - GFF4078 0.21 -0.2 70,891 - GFF4078 0.21 +0.2 70,894 + GFF4078 0.21 +0.3 70,951 + GFF4078 0.26 +0.1 70,951 + GFF4078 0.26 -0.8 70,951 + GFF4078 0.26 -1.8 70,951 + GFF4078 0.26 +1.3 70,951 + GFF4078 0.26 -0.3 70,952 - GFF4078 0.26 -2.5 70,952 - GFF4078 0.26 +0.3 70,952 - GFF4078 0.26 -0.3 70,954 + GFF4078 0.26 +0.6 70,955 - GFF4078 0.26 +1.1 71,005 + GFF4078 0.30 +0.3 71,006 - GFF4078 0.30 -0.2 71,147 - GFF4078 0.41 -0.7 71,254 + GFF4078 0.49 -0.9 71,254 + GFF4078 0.49 -2.6 71,255 - GFF4078 0.50 +0.2 71,281 + GFF4078 0.52 -0.9 71,281 + GFF4078 0.52 +0.1 71,281 + GFF4078 0.52 -0.2 71,281 + GFF4078 0.52 +0.5 71,281 + GFF4078 0.52 +0.3 71,282 - GFF4078 0.52 +0.6 71,282 - GFF4078 0.52 -0.3 71,422 + GFF4078 0.63 -3.1 71,422 + GFF4078 0.63 -0.4 71,423 - GFF4078 0.63 +0.2 71,423 - GFF4078 0.63 +0.0 71,423 - GFF4078 0.63 +0.1 71,519 + GFF4078 0.70 -1.5 71,520 - GFF4078 0.70 +0.2 71,520 - GFF4078 0.70 +0.3
Or see this region's nucleotide sequence