Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3990 and GFF3991 are separated by 126 nucleotides GFF3991 and GFF3992 are separated by 24 nucleotides
GFF3990 - hypothetical protein, at 361,594 to 363,006
GFF3990
GFF3991 - hypothetical protein, at 363,133 to 364,143
GFF3991
GFF3992 - hypothetical protein, at 364,168 to 365,289
GFF3992
Position (kb) 363
364
365 Strain fitness (log2 ratio) -1
0
1 at 362.337 kb on - strand, within GFF3990 at 362.534 kb on - strand, within GFF3990 at 362.614 kb on + strand, within GFF3990 at 362.623 kb on + strand, within GFF3990 at 362.624 kb on - strand, within GFF3990 at 362.797 kb on + strand, within GFF3990 at 362.797 kb on + strand, within GFF3990 at 362.797 kb on + strand, within GFF3990 at 362.798 kb on - strand, within GFF3990 at 362.798 kb on - strand, within GFF3990 at 362.875 kb on + strand at 362.875 kb on + strand at 362.877 kb on + strand at 362.877 kb on + strand at 363.024 kb on + strand at 363.024 kb on + strand at 363.094 kb on + strand at 363.094 kb on + strand at 363.132 kb on + strand at 364.141 kb on + strand at 364.238 kb on + strand at 364.238 kb on + strand at 364.239 kb on - strand at 364.349 kb on + strand, within GFF3992 at 364.349 kb on + strand, within GFF3992 at 364.350 kb on - strand, within GFF3992 at 364.484 kb on + strand, within GFF3992 at 364.484 kb on + strand, within GFF3992 at 364.485 kb on - strand, within GFF3992 at 364.626 kb on - strand, within GFF3992 at 364.652 kb on + strand, within GFF3992 at 364.679 kb on + strand, within GFF3992 at 364.872 kb on - strand, within GFF3992 at 364.872 kb on - strand, within GFF3992 at 364.940 kb on + strand, within GFF3992 at 364.997 kb on + strand, within GFF3992 at 365.022 kb on - strand, within GFF3992
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 362,337 - GFF3990 0.53 -0.1 362,534 - GFF3990 0.67 +0.9 362,614 + GFF3990 0.72 +0.9 362,623 + GFF3990 0.73 +0.6 362,624 - GFF3990 0.73 -0.1 362,797 + GFF3990 0.85 +0.1 362,797 + GFF3990 0.85 +0.5 362,797 + GFF3990 0.85 +0.7 362,798 - GFF3990 0.85 +0.8 362,798 - GFF3990 0.85 -0.9 362,875 + +0.7 362,875 + +0.9 362,877 + +0.8 362,877 + +1.3 363,024 + +0.2 363,024 + -0.1 363,094 + +0.0 363,094 + -0.6 363,132 + +0.5 364,141 + +0.7 364,238 + +0.5 364,238 + +0.6 364,239 - -0.6 364,349 + GFF3992 0.16 +0.3 364,349 + GFF3992 0.16 +0.2 364,350 - GFF3992 0.16 +0.5 364,484 + GFF3992 0.28 +0.6 364,484 + GFF3992 0.28 +0.3 364,485 - GFF3992 0.28 +0.3 364,626 - GFF3992 0.41 +1.0 364,652 + GFF3992 0.43 -0.1 364,679 + GFF3992 0.46 -0.3 364,872 - GFF3992 0.63 -0.1 364,872 - GFF3992 0.63 -0.6 364,940 + GFF3992 0.69 +0.4 364,997 + GFF3992 0.74 -0.2 365,022 - GFF3992 0.76 +0.2
Or see this region's nucleotide sequence