Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3738 and GFF3739 are separated by 9 nucleotides GFF3739 and GFF3740 are separated by 190 nucleotides GFF3740 and GFF3741 are separated by 138 nucleotides
GFF3738 - Dephospho-CoA kinase, at 79,358 to 79,960
GFF3738
GFF3739 - DNA polymerase III subunit epsilon, at 79,970 to 80,692
GFF3739
GFF3740 - hypothetical protein, at 80,883 to 82,895
GFF3740
GFF3741 - tRNA modification GTPase MnmE, at 83,034 to 84,344
GFF3741
Position (kb) 80
81
82
83 Strain fitness (log2 ratio) -1
0
1 at 80.654 kb on + strand at 81.370 kb on + strand, within GFF3740 at 81.370 kb on + strand, within GFF3740 at 81.370 kb on + strand, within GFF3740 at 81.370 kb on + strand, within GFF3740 at 81.371 kb on - strand, within GFF3740 at 81.569 kb on + strand, within GFF3740 at 81.569 kb on + strand, within GFF3740 at 81.569 kb on + strand, within GFF3740 at 81.913 kb on + strand, within GFF3740 at 81.913 kb on + strand, within GFF3740 at 81.913 kb on + strand, within GFF3740 at 81.914 kb on - strand, within GFF3740 at 81.914 kb on - strand, within GFF3740 at 82.168 kb on + strand, within GFF3740 at 82.169 kb on - strand, within GFF3740 at 82.508 kb on - strand, within GFF3740 at 82.508 kb on - strand, within GFF3740 at 82.508 kb on - strand, within GFF3740 at 82.508 kb on - strand, within GFF3740 at 82.529 kb on - strand, within GFF3740 at 82.621 kb on + strand, within GFF3740 at 82.622 kb on - strand, within GFF3740 at 82.948 kb on - strand at 82.948 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 80,654 + -0.1 81,370 + GFF3740 0.24 +0.4 81,370 + GFF3740 0.24 +0.0 81,370 + GFF3740 0.24 +0.3 81,370 + GFF3740 0.24 +0.8 81,371 - GFF3740 0.24 +0.8 81,569 + GFF3740 0.34 -0.3 81,569 + GFF3740 0.34 -0.7 81,569 + GFF3740 0.34 +0.7 81,913 + GFF3740 0.51 +0.1 81,913 + GFF3740 0.51 -0.2 81,913 + GFF3740 0.51 -0.2 81,914 - GFF3740 0.51 -0.5 81,914 - GFF3740 0.51 -0.8 82,168 + GFF3740 0.64 +0.1 82,169 - GFF3740 0.64 -0.1 82,508 - GFF3740 0.81 +0.1 82,508 - GFF3740 0.81 -0.2 82,508 - GFF3740 0.81 -0.7 82,508 - GFF3740 0.81 -0.5 82,529 - GFF3740 0.82 +0.4 82,621 + GFF3740 0.86 +1.3 82,622 - GFF3740 0.86 +0.9 82,948 - +0.2 82,948 - +0.1
Or see this region's nucleotide sequence