Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3430 and GFF3431 are separated by 150 nucleotides GFF3431 and GFF3432 are separated by 227 nucleotides
GFF3430 - L-serine dehydratase 2, at 280,266 to 281,612
GFF3430
GFF3431 - Serine hydroxymethyltransferase 2, at 281,763 to 283,037
GFF3431
GFF3432 - Glutamyl-tRNA(Gln) amidotransferase subunit A, at 283,265 to 284,530
GFF3432
Position (kb) 281
282
283
284 Strain fitness (log2 ratio) -1
0
1 at 281.143 kb on - strand, within GFF3430 at 281.563 kb on - strand at 281.658 kb on - strand at 281.740 kb on - strand at 281.925 kb on + strand, within GFF3431 at 281.925 kb on + strand, within GFF3431 at 281.925 kb on + strand, within GFF3431 at 281.925 kb on + strand, within GFF3431 at 281.955 kb on + strand, within GFF3431 at 282.031 kb on - strand, within GFF3431 at 282.104 kb on + strand, within GFF3431 at 282.229 kb on - strand, within GFF3431 at 282.229 kb on - strand, within GFF3431 at 282.229 kb on - strand, within GFF3431 at 282.402 kb on + strand, within GFF3431 at 282.402 kb on + strand, within GFF3431 at 282.402 kb on + strand, within GFF3431 at 282.402 kb on + strand, within GFF3431 at 282.403 kb on - strand, within GFF3431 at 282.618 kb on + strand, within GFF3431 at 282.710 kb on + strand, within GFF3431 at 282.711 kb on - strand, within GFF3431 at 282.711 kb on - strand, within GFF3431 at 283.024 kb on - strand at 283.024 kb on - strand at 283.024 kb on - strand at 283.024 kb on - strand at 283.319 kb on - strand at 283.319 kb on - strand at 283.511 kb on + strand, within GFF3432 at 283.512 kb on - strand, within GFF3432 at 283.526 kb on + strand, within GFF3432 at 283.526 kb on + strand, within GFF3432 at 283.526 kb on + strand, within GFF3432 at 283.527 kb on - strand, within GFF3432 at 283.527 kb on - strand, within GFF3432 at 283.527 kb on - strand, within GFF3432
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 281,143 - GFF3430 0.65 -0.3 281,563 - +0.4 281,658 - -0.1 281,740 - +0.3 281,925 + GFF3431 0.13 +0.5 281,925 + GFF3431 0.13 +0.0 281,925 + GFF3431 0.13 +0.4 281,925 + GFF3431 0.13 -1.0 281,955 + GFF3431 0.15 -0.1 282,031 - GFF3431 0.21 +0.2 282,104 + GFF3431 0.27 +0.0 282,229 - GFF3431 0.37 -0.2 282,229 - GFF3431 0.37 +0.2 282,229 - GFF3431 0.37 +0.4 282,402 + GFF3431 0.50 -0.5 282,402 + GFF3431 0.50 -0.3 282,402 + GFF3431 0.50 -1.5 282,402 + GFF3431 0.50 +1.3 282,403 - GFF3431 0.50 +0.2 282,618 + GFF3431 0.67 -0.5 282,710 + GFF3431 0.74 +0.3 282,711 - GFF3431 0.74 +0.2 282,711 - GFF3431 0.74 -0.5 283,024 - +0.6 283,024 - +0.3 283,024 - -0.5 283,024 - -0.0 283,319 - -0.5 283,319 - +0.1 283,511 + GFF3432 0.19 -0.1 283,512 - GFF3432 0.20 +0.0 283,526 + GFF3432 0.21 +0.4 283,526 + GFF3432 0.21 +0.1 283,526 + GFF3432 0.21 -0.1 283,527 - GFF3432 0.21 -0.7 283,527 - GFF3432 0.21 +0.8 283,527 - GFF3432 0.21 -0.9
Or see this region's nucleotide sequence