Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF332 and GFF333 overlap by 4 nucleotides GFF333 and GFF334 are separated by 21 nucleotides
GFF332 - hypothetical protein, at 337,919 to 341,665
GFF332
GFF333 - hypothetical protein, at 341,662 to 342,087
GFF333
GFF334 - hypothetical protein, at 342,109 to 343,536
GFF334
Position (kb) 341
342
343 Strain fitness (log2 ratio) -1
0
1 at 340.887 kb on - strand, within GFF332 at 340.997 kb on + strand, within GFF332 at 340.997 kb on + strand, within GFF332 at 340.997 kb on + strand, within GFF332 at 340.997 kb on + strand, within GFF332 at 340.998 kb on - strand, within GFF332 at 340.998 kb on - strand, within GFF332 at 340.998 kb on - strand, within GFF332 at 340.998 kb on - strand, within GFF332 at 340.998 kb on - strand, within GFF332 at 340.998 kb on - strand, within GFF332 at 341.047 kb on + strand, within GFF332 at 341.047 kb on + strand, within GFF332 at 341.047 kb on + strand, within GFF332 at 341.048 kb on - strand, within GFF332 at 341.070 kb on - strand, within GFF332 at 341.206 kb on + strand, within GFF332 at 341.207 kb on - strand, within GFF332 at 341.260 kb on - strand, within GFF332 at 341.260 kb on - strand, within GFF332 at 341.381 kb on + strand at 341.381 kb on + strand at 341.382 kb on - strand at 341.420 kb on + strand at 341.456 kb on + strand at 341.484 kb on - strand at 341.484 kb on - strand at 341.495 kb on + strand at 341.495 kb on + strand at 341.569 kb on - strand at 341.809 kb on + strand, within GFF333 at 341.809 kb on + strand, within GFF333 at 341.809 kb on + strand, within GFF333 at 341.809 kb on + strand, within GFF333 at 341.810 kb on - strand, within GFF333 at 341.810 kb on - strand, within GFF333 at 341.810 kb on - strand, within GFF333 at 341.810 kb on - strand, within GFF333 at 341.894 kb on + strand, within GFF333 at 342.127 kb on + strand at 342.128 kb on - strand at 342.128 kb on - strand at 342.128 kb on - strand at 342.128 kb on - strand at 342.267 kb on + strand, within GFF334 at 342.267 kb on + strand, within GFF334 at 342.268 kb on - strand, within GFF334 at 342.287 kb on - strand, within GFF334 at 342.287 kb on - strand, within GFF334 at 342.287 kb on - strand, within GFF334 at 342.322 kb on + strand, within GFF334 at 342.322 kb on + strand, within GFF334 at 342.322 kb on + strand, within GFF334 at 342.323 kb on - strand, within GFF334 at 342.323 kb on - strand, within GFF334 at 342.334 kb on + strand, within GFF334 at 342.364 kb on + strand, within GFF334 at 342.365 kb on - strand, within GFF334 at 342.365 kb on - strand, within GFF334 at 342.365 kb on - strand, within GFF334 at 342.426 kb on + strand, within GFF334 at 342.427 kb on - strand, within GFF334 at 342.427 kb on - strand, within GFF334 at 342.430 kb on + strand, within GFF334 at 342.430 kb on + strand, within GFF334 at 342.430 kb on + strand, within GFF334 at 342.430 kb on + strand, within GFF334 at 342.430 kb on + strand, within GFF334 at 342.430 kb on + strand, within GFF334 at 342.430 kb on + strand, within GFF334 at 342.430 kb on + strand, within GFF334 at 342.431 kb on - strand, within GFF334 at 342.431 kb on - strand, within GFF334 at 342.431 kb on - strand, within GFF334 at 342.431 kb on - strand, within GFF334 at 342.491 kb on - strand, within GFF334 at 342.604 kb on + strand, within GFF334 at 342.714 kb on + strand, within GFF334 at 342.759 kb on + strand, within GFF334
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 340,887 - GFF332 0.79 +0.6 340,997 + GFF332 0.82 +0.2 340,997 + GFF332 0.82 +0.5 340,997 + GFF332 0.82 -0.9 340,997 + GFF332 0.82 +1.0 340,998 - GFF332 0.82 -1.2 340,998 - GFF332 0.82 -0.5 340,998 - GFF332 0.82 -0.2 340,998 - GFF332 0.82 +0.7 340,998 - GFF332 0.82 +0.4 340,998 - GFF332 0.82 +0.2 341,047 + GFF332 0.83 +0.1 341,047 + GFF332 0.83 +0.4 341,047 + GFF332 0.83 -0.0 341,048 - GFF332 0.84 +0.5 341,070 - GFF332 0.84 -0.4 341,206 + GFF332 0.88 -0.9 341,207 - GFF332 0.88 -0.5 341,260 - GFF332 0.89 +0.2 341,260 - GFF332 0.89 -0.2 341,381 + +0.7 341,381 + +0.5 341,382 - +1.1 341,420 + +0.5 341,456 + +1.1 341,484 - -0.1 341,484 - -0.9 341,495 + +1.1 341,495 + -0.2 341,569 - -0.2 341,809 + GFF333 0.35 +0.0 341,809 + GFF333 0.35 -1.0 341,809 + GFF333 0.35 +0.3 341,809 + GFF333 0.35 -0.0 341,810 - GFF333 0.35 -0.8 341,810 - GFF333 0.35 -0.3 341,810 - GFF333 0.35 +0.3 341,810 - GFF333 0.35 -1.3 341,894 + GFF333 0.54 +1.0 342,127 + -0.6 342,128 - -0.6 342,128 - +0.1 342,128 - -0.3 342,128 - +1.5 342,267 + GFF334 0.11 +0.1 342,267 + GFF334 0.11 -0.1 342,268 - GFF334 0.11 -0.2 342,287 - GFF334 0.12 +0.4 342,287 - GFF334 0.12 +1.0 342,287 - GFF334 0.12 +0.3 342,322 + GFF334 0.15 +0.8 342,322 + GFF334 0.15 +0.6 342,322 + GFF334 0.15 +0.4 342,323 - GFF334 0.15 -0.3 342,323 - GFF334 0.15 -0.4 342,334 + GFF334 0.16 -0.2 342,364 + GFF334 0.18 -0.7 342,365 - GFF334 0.18 +1.0 342,365 - GFF334 0.18 +0.2 342,365 - GFF334 0.18 +0.2 342,426 + GFF334 0.22 -0.5 342,427 - GFF334 0.22 -0.7 342,427 - GFF334 0.22 +0.1 342,430 + GFF334 0.22 +0.1 342,430 + GFF334 0.22 +0.3 342,430 + GFF334 0.22 +0.4 342,430 + GFF334 0.22 -0.8 342,430 + GFF334 0.22 -0.3 342,430 + GFF334 0.22 +0.3 342,430 + GFF334 0.22 -0.3 342,430 + GFF334 0.22 +0.1 342,431 - GFF334 0.23 +0.3 342,431 - GFF334 0.23 -0.3 342,431 - GFF334 0.23 -0.0 342,431 - GFF334 0.23 +0.8 342,491 - GFF334 0.27 +0.2 342,604 + GFF334 0.35 -0.8 342,714 + GFF334 0.42 -1.3 342,759 + GFF334 0.46 +1.3
Or see this region's nucleotide sequence