Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3190 and GFF3191 are separated by 329 nucleotides GFF3191 and GFF3192 are separated by 589 nucleotides
GFF3190 - 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB, at 11,888 to 12,745
GFF3190
GFF3191 - Sialic acid transporter NanT, at 13,075 to 14,742
GFF3191
GFF3192 - Glutamyl-tRNA(Gln) amidotransferase subunit A, at 15,332 to 16,519
GFF3192
Position (kb) 13
14
15 Strain fitness (log2 ratio) -1
0
1
2 at 12.692 kb on - strand at 12.692 kb on - strand at 12.810 kb on + strand at 12.810 kb on + strand at 12.811 kb on - strand at 12.811 kb on - strand at 12.811 kb on - strand at 12.830 kb on - strand at 13.067 kb on + strand at 13.067 kb on + strand at 13.067 kb on + strand at 13.068 kb on - strand at 13.068 kb on - strand at 13.068 kb on - strand at 13.068 kb on - strand at 13.177 kb on + strand at 13.177 kb on + strand at 13.178 kb on - strand at 13.178 kb on - strand at 13.186 kb on + strand at 13.193 kb on - strand at 13.193 kb on - strand at 13.351 kb on + strand, within GFF3191 at 13.351 kb on + strand, within GFF3191 at 13.352 kb on - strand, within GFF3191 at 13.352 kb on - strand, within GFF3191 at 13.352 kb on - strand, within GFF3191 at 13.496 kb on - strand, within GFF3191 at 13.513 kb on + strand, within GFF3191 at 13.514 kb on - strand, within GFF3191 at 13.514 kb on - strand, within GFF3191 at 13.514 kb on - strand, within GFF3191 at 13.514 kb on - strand, within GFF3191 at 13.514 kb on - strand, within GFF3191 at 13.514 kb on - strand, within GFF3191 at 13.514 kb on - strand, within GFF3191 at 13.552 kb on + strand, within GFF3191 at 13.553 kb on - strand, within GFF3191 at 13.553 kb on - strand, within GFF3191 at 13.885 kb on + strand, within GFF3191 at 13.886 kb on - strand, within GFF3191 at 13.886 kb on - strand, within GFF3191 at 13.927 kb on + strand, within GFF3191 at 14.059 kb on + strand, within GFF3191 at 14.059 kb on + strand, within GFF3191 at 14.059 kb on + strand, within GFF3191 at 14.059 kb on + strand, within GFF3191 at 14.060 kb on - strand, within GFF3191 at 14.089 kb on + strand, within GFF3191 at 14.089 kb on + strand, within GFF3191 at 14.090 kb on - strand, within GFF3191 at 14.090 kb on - strand, within GFF3191 at 14.090 kb on - strand, within GFF3191 at 14.194 kb on + strand, within GFF3191 at 14.194 kb on + strand, within GFF3191 at 14.194 kb on + strand, within GFF3191 at 14.195 kb on - strand, within GFF3191 at 14.195 kb on - strand, within GFF3191 at 14.314 kb on + strand, within GFF3191 at 14.314 kb on + strand, within GFF3191 at 14.314 kb on + strand, within GFF3191 at 14.314 kb on + strand, within GFF3191 at 14.315 kb on - strand, within GFF3191 at 14.316 kb on + strand, within GFF3191 at 14.317 kb on - strand, within GFF3191 at 14.488 kb on + strand, within GFF3191 at 14.488 kb on + strand, within GFF3191 at 14.488 kb on + strand, within GFF3191 at 14.489 kb on - strand, within GFF3191 at 14.489 kb on - strand, within GFF3191 at 14.638 kb on + strand at 14.638 kb on + strand at 14.639 kb on - strand at 14.639 kb on - strand at 14.639 kb on - strand at 14.639 kb on - strand at 14.639 kb on - strand at 14.639 kb on - strand at 14.639 kb on - strand at 14.642 kb on - strand at 14.727 kb on - strand at 14.851 kb on + strand at 15.025 kb on + strand at 15.025 kb on + strand at 15.025 kb on + strand at 15.288 kb on + strand at 15.288 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 12,692 - -1.1 12,692 - -1.3 12,810 + -0.6 12,810 + +0.1 12,811 - +0.6 12,811 - +0.4 12,811 - +1.3 12,830 - +0.5 13,067 + +0.6 13,067 + +0.1 13,067 + +0.5 13,068 - +1.3 13,068 - +0.8 13,068 - +1.3 13,068 - +1.5 13,177 + +0.5 13,177 + +0.6 13,178 - +1.0 13,178 - +1.1 13,186 + +0.2 13,193 - +1.6 13,193 - +0.9 13,351 + GFF3191 0.17 -0.2 13,351 + GFF3191 0.17 +0.0 13,352 - GFF3191 0.17 +0.7 13,352 - GFF3191 0.17 +1.0 13,352 - GFF3191 0.17 +0.3 13,496 - GFF3191 0.25 +2.0 13,513 + GFF3191 0.26 +1.6 13,514 - GFF3191 0.26 +0.9 13,514 - GFF3191 0.26 +0.7 13,514 - GFF3191 0.26 +1.5 13,514 - GFF3191 0.26 -0.3 13,514 - GFF3191 0.26 +1.1 13,514 - GFF3191 0.26 +0.1 13,514 - GFF3191 0.26 +0.1 13,552 + GFF3191 0.29 +0.4 13,553 - GFF3191 0.29 +0.2 13,553 - GFF3191 0.29 +0.9 13,885 + GFF3191 0.49 +0.9 13,886 - GFF3191 0.49 -0.1 13,886 - GFF3191 0.49 +0.7 13,927 + GFF3191 0.51 -0.3 14,059 + GFF3191 0.59 +1.0 14,059 + GFF3191 0.59 +1.7 14,059 + GFF3191 0.59 +0.3 14,059 + GFF3191 0.59 +0.4 14,060 - GFF3191 0.59 -0.1 14,089 + GFF3191 0.61 +0.8 14,089 + GFF3191 0.61 +0.6 14,090 - GFF3191 0.61 +1.3 14,090 - GFF3191 0.61 +1.6 14,090 - GFF3191 0.61 +0.2 14,194 + GFF3191 0.67 +1.5 14,194 + GFF3191 0.67 +0.7 14,194 + GFF3191 0.67 +0.8 14,195 - GFF3191 0.67 +0.3 14,195 - GFF3191 0.67 +0.2 14,314 + GFF3191 0.74 -0.2 14,314 + GFF3191 0.74 +0.5 14,314 + GFF3191 0.74 +0.2 14,314 + GFF3191 0.74 +0.6 14,315 - GFF3191 0.74 +0.0 14,316 + GFF3191 0.74 +1.5 14,317 - GFF3191 0.74 +0.4 14,488 + GFF3191 0.85 +0.8 14,488 + GFF3191 0.85 +1.2 14,488 + GFF3191 0.85 +0.2 14,489 - GFF3191 0.85 -0.2 14,489 - GFF3191 0.85 +0.1 14,638 + +0.6 14,638 + +0.2 14,639 - +1.2 14,639 - +1.1 14,639 - -0.7 14,639 - +0.9 14,639 - -0.3 14,639 - +1.0 14,639 - -0.5 14,642 - +0.8 14,727 - +0.4 14,851 + -0.0 15,025 + +0.3 15,025 + -0.4 15,025 + +0.0 15,288 + -0.5 15,288 + -0.2
Or see this region's nucleotide sequence