Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2982 and GFF2983 are separated by 38 nucleotides GFF2983 and GFF2984 are separated by 12 nucleotides
GFF2982 - Sensor protein KdpD, at 705,460 to 708,177
GFF2982
GFF2983 - Potassium-transporting ATPase KdpC subunit, at 708,216 to 708,824
GFF2983
GFF2984 - Potassium-transporting ATPase ATP-binding subunit, at 708,837 to 710,900
GFF2984
Position (kb) 708
709 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 707.315 kb on + strand, within GFF2982 at 707.316 kb on - strand, within GFF2982 at 707.316 kb on - strand, within GFF2982 at 707.316 kb on - strand, within GFF2982 at 707.316 kb on - strand, within GFF2982 at 707.363 kb on + strand, within GFF2982 at 707.364 kb on - strand, within GFF2982 at 707.543 kb on + strand, within GFF2982 at 707.543 kb on + strand, within GFF2982 at 707.543 kb on + strand, within GFF2982 at 707.543 kb on + strand, within GFF2982 at 707.543 kb on + strand, within GFF2982 at 707.543 kb on + strand, within GFF2982 at 707.544 kb on - strand, within GFF2982 at 707.544 kb on - strand, within GFF2982 at 707.544 kb on - strand, within GFF2982 at 707.544 kb on - strand, within GFF2982 at 707.544 kb on - strand, within GFF2982 at 707.579 kb on + strand, within GFF2982 at 707.579 kb on + strand, within GFF2982 at 707.579 kb on + strand, within GFF2982 at 707.580 kb on - strand, within GFF2982 at 707.580 kb on - strand, within GFF2982 at 707.580 kb on - strand, within GFF2982 at 707.580 kb on - strand, within GFF2982 at 707.753 kb on + strand, within GFF2982 at 707.753 kb on + strand, within GFF2982 at 707.753 kb on + strand, within GFF2982 at 707.796 kb on - strand, within GFF2982 at 707.796 kb on - strand, within GFF2982 at 708.053 kb on + strand at 708.054 kb on - strand at 708.054 kb on - strand at 708.217 kb on + strand at 708.218 kb on - strand at 708.218 kb on - strand at 708.559 kb on + strand, within GFF2983 at 708.559 kb on + strand, within GFF2983 at 708.559 kb on + strand, within GFF2983 at 708.560 kb on - strand, within GFF2983 at 708.758 kb on - strand, within GFF2983 at 708.917 kb on - strand at 709.127 kb on - strand, within GFF2984 at 709.555 kb on + strand, within GFF2984 at 709.556 kb on - strand, within GFF2984
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 707,315 + GFF2982 0.68 +0.4 707,316 - GFF2982 0.68 +0.5 707,316 - GFF2982 0.68 -0.1 707,316 - GFF2982 0.68 +0.7 707,316 - GFF2982 0.68 +0.1 707,363 + GFF2982 0.70 -0.0 707,364 - GFF2982 0.70 +1.4 707,543 + GFF2982 0.77 -0.3 707,543 + GFF2982 0.77 +0.3 707,543 + GFF2982 0.77 +0.3 707,543 + GFF2982 0.77 -0.7 707,543 + GFF2982 0.77 +0.2 707,543 + GFF2982 0.77 +0.1 707,544 - GFF2982 0.77 +0.4 707,544 - GFF2982 0.77 -0.7 707,544 - GFF2982 0.77 -0.6 707,544 - GFF2982 0.77 -0.9 707,544 - GFF2982 0.77 +0.4 707,579 + GFF2982 0.78 +0.8 707,579 + GFF2982 0.78 +0.1 707,579 + GFF2982 0.78 -0.3 707,580 - GFF2982 0.78 -0.7 707,580 - GFF2982 0.78 +0.4 707,580 - GFF2982 0.78 -0.1 707,580 - GFF2982 0.78 -2.4 707,753 + GFF2982 0.84 -0.4 707,753 + GFF2982 0.84 +1.3 707,753 + GFF2982 0.84 +0.8 707,796 - GFF2982 0.86 -0.4 707,796 - GFF2982 0.86 -0.1 708,053 + +0.1 708,054 - -0.0 708,054 - +0.3 708,217 + +0.2 708,218 - +0.9 708,218 - +0.0 708,559 + GFF2983 0.56 -1.2 708,559 + GFF2983 0.56 +0.3 708,559 + GFF2983 0.56 -1.0 708,560 - GFF2983 0.56 -0.6 708,758 - GFF2983 0.89 -0.9 708,917 - +0.2 709,127 - GFF2984 0.14 -3.1 709,555 + GFF2984 0.35 +0.4 709,556 - GFF2984 0.35 +0.1
Or see this region's nucleotide sequence