Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2929 and GFF2930 are separated by 214 nucleotides GFF2930 and GFF2931 are separated by 171 nucleotides GFF2931 and GFF2932 are separated by 109 nucleotides
GFF2929 - hypothetical protein, at 649,883 to 651,589
GFF2929
GFF2930 - hypothetical protein, at 651,804 to 653,174
GFF2930
GFF2931 - hypothetical protein, at 653,346 to 653,660
GFF2931
GFF2932 - hypothetical protein, at 653,770 to 653,967
GFF2932
Position (kb) 651
652
653
654 Strain fitness (log2 ratio) -2
-1
0
1 at 651.102 kb on + strand, within GFF2929 at 651.103 kb on - strand, within GFF2929 at 651.103 kb on - strand, within GFF2929 at 651.288 kb on + strand, within GFF2929 at 651.288 kb on + strand, within GFF2929 at 651.288 kb on + strand, within GFF2929 at 651.289 kb on - strand, within GFF2929 at 651.306 kb on + strand, within GFF2929 at 651.336 kb on + strand, within GFF2929 at 651.336 kb on + strand, within GFF2929 at 651.337 kb on - strand, within GFF2929 at 651.337 kb on - strand, within GFF2929 at 651.512 kb on - strand at 651.567 kb on + strand at 651.711 kb on - strand at 651.821 kb on - strand at 651.863 kb on + strand at 651.937 kb on + strand at 651.938 kb on - strand at 651.981 kb on + strand, within GFF2930 at 651.981 kb on + strand, within GFF2930 at 651.982 kb on - strand, within GFF2930 at 651.982 kb on - strand, within GFF2930 at 651.982 kb on - strand, within GFF2930 at 652.074 kb on - strand, within GFF2930 at 652.136 kb on + strand, within GFF2930 at 652.136 kb on + strand, within GFF2930 at 652.557 kb on - strand, within GFF2930 at 652.649 kb on - strand, within GFF2930 at 652.735 kb on + strand, within GFF2930 at 652.735 kb on + strand, within GFF2930 at 652.735 kb on + strand, within GFF2930 at 652.735 kb on + strand, within GFF2930 at 652.736 kb on - strand, within GFF2930 at 652.736 kb on - strand, within GFF2930 at 652.736 kb on - strand, within GFF2930 at 652.736 kb on - strand, within GFF2930 at 652.736 kb on - strand, within GFF2930 at 652.801 kb on + strand, within GFF2930 at 652.802 kb on - strand, within GFF2930 at 652.858 kb on + strand, within GFF2930 at 652.912 kb on + strand, within GFF2930 at 653.068 kb on + strand at 653.069 kb on - strand at 653.071 kb on + strand at 653.072 kb on - strand at 653.285 kb on - strand at 653.359 kb on + strand at 653.359 kb on + strand at 653.359 kb on + strand at 653.390 kb on - strand, within GFF2931 at 653.390 kb on - strand, within GFF2931 at 653.390 kb on - strand, within GFF2931 at 653.931 kb on - strand, within GFF2932 at 654.043 kb on + strand at 654.044 kb on - strand at 654.044 kb on - strand at 654.044 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 651,102 + GFF2929 0.71 +0.0 651,103 - GFF2929 0.71 +0.1 651,103 - GFF2929 0.71 -0.1 651,288 + GFF2929 0.82 +0.8 651,288 + GFF2929 0.82 +0.3 651,288 + GFF2929 0.82 +0.3 651,289 - GFF2929 0.82 -0.2 651,306 + GFF2929 0.83 -0.0 651,336 + GFF2929 0.85 -0.6 651,336 + GFF2929 0.85 -0.6 651,337 - GFF2929 0.85 +0.7 651,337 - GFF2929 0.85 +0.1 651,512 - -0.5 651,567 + -0.1 651,711 - +0.5 651,821 - -0.9 651,863 + -0.2 651,937 + +0.2 651,938 - -0.2 651,981 + GFF2930 0.13 -0.5 651,981 + GFF2930 0.13 -0.7 651,982 - GFF2930 0.13 -0.1 651,982 - GFF2930 0.13 +0.5 651,982 - GFF2930 0.13 -0.4 652,074 - GFF2930 0.20 -0.4 652,136 + GFF2930 0.24 +0.2 652,136 + GFF2930 0.24 +0.5 652,557 - GFF2930 0.55 -0.7 652,649 - GFF2930 0.62 -0.1 652,735 + GFF2930 0.68 -1.8 652,735 + GFF2930 0.68 -0.4 652,735 + GFF2930 0.68 -0.6 652,735 + GFF2930 0.68 -0.6 652,736 - GFF2930 0.68 -0.7 652,736 - GFF2930 0.68 -0.3 652,736 - GFF2930 0.68 +0.1 652,736 - GFF2930 0.68 +0.4 652,736 - GFF2930 0.68 -1.0 652,801 + GFF2930 0.73 -1.6 652,802 - GFF2930 0.73 +0.1 652,858 + GFF2930 0.77 +0.4 652,912 + GFF2930 0.81 -0.0 653,068 + -0.9 653,069 - -0.8 653,071 + -0.4 653,072 - -0.2 653,285 - +0.8 653,359 + -0.2 653,359 + +1.1 653,359 + -0.9 653,390 - GFF2931 0.14 +1.2 653,390 - GFF2931 0.14 +1.6 653,390 - GFF2931 0.14 +1.2 653,931 - GFF2932 0.81 +0.5 654,043 + +0.1 654,044 - -0.5 654,044 - +0.3 654,044 - +0.2
Or see this region's nucleotide sequence