Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2906 and GFF2907 are separated by 104 nucleotides GFF2907 and GFF2908 are separated by 22 nucleotides
GFF2906 - Inner membrane transport protein YdhP, at 623,203 to 624,375
GFF2906
GFF2907 - HTH-type transcriptional regulator DmlR, at 624,480 to 625,400
GFF2907
GFF2908 - hypothetical protein, at 625,423 to 626,574
GFF2908
Position (kb) 624
625
626 Strain fitness (log2 ratio) -2
-1
0
1 at 623.639 kb on + strand, within GFF2906 at 623.640 kb on - strand, within GFF2906 at 623.706 kb on + strand, within GFF2906 at 623.706 kb on + strand, within GFF2906 at 623.706 kb on + strand, within GFF2906 at 623.707 kb on - strand, within GFF2906 at 623.708 kb on + strand, within GFF2906 at 623.708 kb on + strand, within GFF2906 at 623.708 kb on + strand, within GFF2906 at 623.708 kb on + strand, within GFF2906 at 623.709 kb on - strand, within GFF2906 at 623.709 kb on - strand, within GFF2906 at 623.709 kb on - strand, within GFF2906 at 623.709 kb on - strand, within GFF2906 at 623.709 kb on - strand, within GFF2906 at 623.709 kb on - strand, within GFF2906 at 623.709 kb on - strand, within GFF2906 at 623.887 kb on + strand, within GFF2906 at 624.099 kb on - strand, within GFF2906 at 624.230 kb on + strand, within GFF2906 at 624.230 kb on + strand, within GFF2906 at 624.231 kb on - strand, within GFF2906 at 624.231 kb on - strand, within GFF2906 at 624.231 kb on - strand, within GFF2906 at 624.231 kb on - strand, within GFF2906 at 624.313 kb on + strand at 624.413 kb on + strand at 624.414 kb on - strand at 624.414 kb on - strand at 624.414 kb on - strand at 624.414 kb on - strand at 624.438 kb on + strand at 624.458 kb on + strand at 624.458 kb on + strand at 624.458 kb on + strand at 624.458 kb on + strand at 624.681 kb on + strand, within GFF2907 at 624.681 kb on + strand, within GFF2907 at 626.006 kb on + strand, within GFF2908 at 626.016 kb on - strand, within GFF2908 at 626.016 kb on - strand, within GFF2908 at 626.030 kb on + strand, within GFF2908 at 626.031 kb on - strand, within GFF2908 at 626.031 kb on - strand, within GFF2908 at 626.031 kb on - strand, within GFF2908 at 626.204 kb on + strand, within GFF2908 at 626.204 kb on + strand, within GFF2908 at 626.204 kb on + strand, within GFF2908 at 626.205 kb on - strand, within GFF2908 at 626.205 kb on - strand, within GFF2908 at 626.205 kb on - strand, within GFF2908 at 626.205 kb on - strand, within GFF2908 at 626.205 kb on - strand, within GFF2908 at 626.318 kb on + strand, within GFF2908 at 626.319 kb on - strand, within GFF2908
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 623,639 + GFF2906 0.37 +0.4 623,640 - GFF2906 0.37 +0.3 623,706 + GFF2906 0.43 +0.6 623,706 + GFF2906 0.43 -0.6 623,706 + GFF2906 0.43 +0.0 623,707 - GFF2906 0.43 -1.2 623,708 + GFF2906 0.43 -1.0 623,708 + GFF2906 0.43 -0.5 623,708 + GFF2906 0.43 -0.3 623,708 + GFF2906 0.43 -0.1 623,709 - GFF2906 0.43 -0.2 623,709 - GFF2906 0.43 -0.3 623,709 - GFF2906 0.43 -1.4 623,709 - GFF2906 0.43 +0.2 623,709 - GFF2906 0.43 +0.7 623,709 - GFF2906 0.43 +0.1 623,709 - GFF2906 0.43 -0.3 623,887 + GFF2906 0.58 +0.6 624,099 - GFF2906 0.76 -0.4 624,230 + GFF2906 0.88 -0.2 624,230 + GFF2906 0.88 +0.2 624,231 - GFF2906 0.88 -0.7 624,231 - GFF2906 0.88 -0.1 624,231 - GFF2906 0.88 -1.2 624,231 - GFF2906 0.88 +0.3 624,313 + -1.0 624,413 + -0.0 624,414 - -0.9 624,414 - +0.2 624,414 - +1.0 624,414 - +0.0 624,438 + -0.3 624,458 + -0.8 624,458 + -2.0 624,458 + -0.0 624,458 + +0.3 624,681 + GFF2907 0.22 -0.3 624,681 + GFF2907 0.22 +0.4 626,006 + GFF2908 0.51 +0.1 626,016 - GFF2908 0.51 +0.4 626,016 - GFF2908 0.51 -0.2 626,030 + GFF2908 0.53 -0.7 626,031 - GFF2908 0.53 -0.1 626,031 - GFF2908 0.53 +0.1 626,031 - GFF2908 0.53 -0.1 626,204 + GFF2908 0.68 -0.3 626,204 + GFF2908 0.68 +0.3 626,204 + GFF2908 0.68 -0.4 626,205 - GFF2908 0.68 +0.2 626,205 - GFF2908 0.68 -0.2 626,205 - GFF2908 0.68 +0.8 626,205 - GFF2908 0.68 -0.4 626,205 - GFF2908 0.68 +0.5 626,318 + GFF2908 0.78 -0.4 626,319 - GFF2908 0.78 -0.1
Or see this region's nucleotide sequence