Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2748 and GFF2749 are separated by 438 nucleotides GFF2749 and GFF2750 overlap by 4 nucleotides
GFF2748 - Metal-pseudopaline receptor CntO, at 448,183 to 450,378
GFF2748
GFF2749 - putative siderophore transport system ATP-binding protein YusV, at 450,817 to 451,656
GFF2749
GFF2750 - putative siderophore transport system permease protein YfiZ, at 451,653 to 452,711
GFF2750
Position (kb) 450
451
452 Strain fitness (log2 ratio) -1
0
1 at 449.858 kb on + strand, within GFF2748 at 449.858 kb on + strand, within GFF2748 at 449.858 kb on + strand, within GFF2748 at 449.859 kb on - strand, within GFF2748 at 449.859 kb on - strand, within GFF2748 at 449.859 kb on - strand, within GFF2748 at 449.859 kb on - strand, within GFF2748 at 450.173 kb on + strand at 450.174 kb on - strand at 450.228 kb on - strand at 450.346 kb on + strand at 450.347 kb on - strand at 450.462 kb on + strand at 450.463 kb on - strand at 450.551 kb on - strand at 450.635 kb on + strand at 450.663 kb on + strand at 450.663 kb on + strand at 450.663 kb on + strand at 450.664 kb on - strand at 450.718 kb on - strand at 450.718 kb on - strand at 450.720 kb on + strand at 450.720 kb on + strand at 450.720 kb on + strand at 450.721 kb on - strand at 450.721 kb on - strand at 450.721 kb on - strand at 450.802 kb on + strand at 450.895 kb on + strand at 451.141 kb on + strand, within GFF2749 at 451.142 kb on - strand, within GFF2749 at 451.142 kb on - strand, within GFF2749 at 451.364 kb on - strand, within GFF2749 at 451.378 kb on + strand, within GFF2749 at 451.379 kb on - strand, within GFF2749 at 451.379 kb on - strand, within GFF2749 at 451.379 kb on - strand, within GFF2749 at 451.475 kb on - strand, within GFF2749 at 451.789 kb on + strand, within GFF2750 at 452.290 kb on - strand, within GFF2750 at 452.290 kb on - strand, within GFF2750 at 452.290 kb on - strand, within GFF2750
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 449,858 + GFF2748 0.76 -0.5 449,858 + GFF2748 0.76 +0.9 449,858 + GFF2748 0.76 -0.2 449,859 - GFF2748 0.76 -0.2 449,859 - GFF2748 0.76 +0.8 449,859 - GFF2748 0.76 +0.6 449,859 - GFF2748 0.76 -0.3 450,173 + +0.2 450,174 - +0.1 450,228 - -0.6 450,346 + -0.2 450,347 - -0.5 450,462 + -0.5 450,463 - -0.5 450,551 - +1.1 450,635 + +0.9 450,663 + +0.5 450,663 + -0.1 450,663 + -0.1 450,664 - -0.1 450,718 - -0.2 450,718 - -0.7 450,720 + -0.1 450,720 + +0.1 450,720 + +0.1 450,721 - +0.2 450,721 - +0.2 450,721 - +0.8 450,802 + -0.2 450,895 + +0.1 451,141 + GFF2749 0.39 +0.2 451,142 - GFF2749 0.39 -0.5 451,142 - GFF2749 0.39 -0.5 451,364 - GFF2749 0.65 -0.3 451,378 + GFF2749 0.67 -0.0 451,379 - GFF2749 0.67 +0.7 451,379 - GFF2749 0.67 -0.4 451,379 - GFF2749 0.67 -0.4 451,475 - GFF2749 0.78 +1.4 451,789 + GFF2750 0.13 +0.3 452,290 - GFF2750 0.60 +0.5 452,290 - GFF2750 0.60 +0.5 452,290 - GFF2750 0.60 +0.7
Or see this region's nucleotide sequence